Podarcis raffonei (Aeolian wall lizard): 128413004
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Entry
128413004 CDS
T09310
Symbol
NR1H3
Name
(RefSeq) oxysterols receptor LXR-alpha isoform X1
KO
K08536
liver X receptor alpha
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03320
PPAR signaling pathway
praf04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128413004 (NR1H3)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
128413004 (NR1H3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
praf03000
]
128413004 (NR1H3)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
praf03310
]
128413004 (NR1H3)
Transcription factors [BR:
praf03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
128413004 (NR1H3)
Nuclear receptors [BR:
praf03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
128413004 (NR1H3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
128413004
NCBI-ProteinID:
XP_053242651
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Position
1:complement(49873256..49903494)
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AA seq
417 aa
AA seq
DB search
MRSPARATIMGPTQLVAQNHGKKACAFGMEEKGFALFHGSEIPPEHIETPPLKRKKGPAP
KMLGNEVCRVCGDKASGFHYNVLSCEGCKGFFRRSVIKGAQYVCKNGGRCEMDMYMRRKC
QECRLRKCHEAGMREQCVLSEEQIQLKKLKKQEDDQSRMVVVRQSSLSPPNTPPKMTPEQ
LDMIEKLVAAQQQCNRRSFTDRLKVTPWPQISDPLHREARQQRFAHFTELAIISVQEIVD
FAKQLPGFLELTREDQIALLKTSTIEVMLLETSRRYNPETECITFLKDLSYNRDDFAKAG
LQFEFINPIFGFSKGMNELQLNDAEYALLIAISIFSADRPNVQDQTLVERLQHTYVEALH
SYICIHRPNDHLMFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVNE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgaggagccccgcaagggcaaccatcatgggtcctacacagctcgtggcacagaatcat
gggaagaaggcatgtgcttttggcatggaagagaaagggtttgcacttttccatggctca
gagatcccacctgagcacatagaaacgccccctctgaaacggaagaaggggccagccccc
aagatgcttggcaacgaggtgtgcagagtgtgtggtgacaaggcctcaggcttccactac
aatgtcctcagctgtgaaggctgcaagggctttttccgacgcagcgtcatcaagggtgcc
cagtatgtttgcaagaatggcggcaggtgtgagatggacatgtacatgcggcgaaagtgt
caggagtgccggttgcgcaaatgccacgaggcaggcatgcgagagcaatgtgttctctct
gaagaacaaatccagctgaagaagttgaagaagcaggaagacgatcagtctcggatggta
gttgtgcgccagagctcattatcccccccaaacacccctcctaaaatgacaccggagcag
cttgacatgatagaaaagcttgtggcagctcagcagcagtgtaatcggcgctccttcaca
gacaggctcaaagtgacgccgtggcctcagatttcggatcctcttcaccgcgaagcacga
cagcagcgttttgctcattttacggagctggcaatcatttctgtacaggagattgtggac
tttgcaaagcagttgccaggtttcctggagctcaccagggaagatcagattgctcttctg
aagacatctacaatagaggtgatgctgttggagacatctcggcgctacaatccagaaaca
gaatgcatcacttttttgaaggacttgagttataatcgggatgactttgccaaagctggc
cttcagtttgagttcatcaaccccatctttggattttcaaagggaatgaatgaactgcaa
ctcaatgatgctgaatatgcacttttaattgctatcagcattttttctgcagaccggcca
aacgttcaagaccagaccctggttgaaaggttgcagcatacctacgtagaagcccttcat
tcttacatttgcatccacagaccaaacgatcatctaatgttcccacggatgttaatgaaa
ctggtcagtcttcggactctaagtagcgtccattctgaacaggtgtttgctcttcggcta
caggacaagaagctgccaccccttctttcagagatctgggatgtcaatgaatga
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