Podarcis raffonei (Aeolian wall lizard): 128416228
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Entry
128416228 CDS
T09310
Symbol
PKP1
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
praf04812
]
128416228 (PKP1)
Cytoskeleton proteins [BR:
praf04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
128416228 (PKP1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Arm
HEAT
HEAT_EZ
HEAT_2
V-ATPase_H_C
Atx10homo_assoc
Motif
Other DBs
NCBI-GeneID:
128416228
NCBI-ProteinID:
XP_053249633
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All DBs
Position
6:66511115..66554741
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AA seq
737 aa
AA seq
DB search
MLHSPSPLKTALAYECFQDQANSTLALPSDHKLKTRGTGKQRVQEQVMMTVKRQKQKTSL
SSASNAAGHSNRGSMYDGLADGHSYGTARGSYYAKAHTGSNNWGHGLYNGTLKREAENKR
YSSYSQMDGWGSRNYNKVCSPTVPGSDYCLVQTMKSSRSEPDLYYDPPRGTLRRNQSGSR
VSHKTSMHRHSLYNSTSNNQHGITTATRPNKVVPVRSPSCTSASMVYVQPVASSKQDAVY
GQVNSKIVNDEMDYGAMTIQKAIQFLCSSDEKYHAMGAYYLQHTCFQDESAKQEVYRLGG
ISKLIELLRSPDENVQQAAAGALRNLVFRNPTNKLETRRQNGIRECVSLLRRTGSTEIQK
QLTGLLWNLSSTDELKEDLIHEALPVLTDRVIIPFSGWSDGVSTRSREIIDPEVFFNATG
CLRNLSSADVGRQTMRNHPGLIDSVMAYSQNCVAANRPDDKSVENCICILHNLSYRLDAE
VPNKYTQLNHMARNSYTDKTLTGCFNNRGGKLEYDDYDLPLPEEDYKPRGSSWLYHSDAI
RTYLSLMDQSKKDATLEACAGALQNLTASRGLMSNAMSQLIGLKEKGLPRIARLLQSNNA
EVVRSGTSLLSNMSRHPILHKTMANQVLPDVTRLLALQAPGSSNYGDIMTSACYTLRNLI
MSNPQMAKPYLTGSLINNVVGLCRNGSYPKAAEAARMLLSDLWSNRELQTILKQQGYDRN
MMGSLTGSTLRTLSSRF
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgcttcactctccttctccactgaaaacagcactggcttatgagtgcttccaggaccag
gccaattctactctagcgttgccctcggatcacaagctgaaaactagggggacaggaaaa
caaagggtccaggagcaggtgatgatgacggtgaaacggcaaaagcaaaagacctccctt
tcatcagcatcgaatgcagcaggccactccaaccgaggttccatgtacgatggtctggct
gatggtcacagctatggaacagcccgtggttcctactatgccaaagctcacacagggagc
aacaactggggacatgggctgtacaatggaaccctcaaaagagaagccgagaacaaacgc
tacagctcctacagccaaatggatggctggggcagccggaactacaacaaggtctgtagc
ccaactgttcctggcagtgattactgccttgtgcagactatgaagagtagccggagtgag
ccagacctctactatgaccctccaagaggcacactgaggagaaaccagagtggaagccgt
gtgagtcacaagaccagtatgcatcgccatagcctctacaacagcacaagcaacaaccag
catggaattacaactgcaacaaggccaaacaaagtagttccagtccgcagcccctcttgc
acctctgccagcatggtctatgtacagcctgttgctagcagcaagcaggatgcagtctat
ggacaggttaactcaaaaatagttaatgacgagatggattatggagcaatgactattcag
aaagccatccaattcctgtgttcttcagatgagaagtaccatgccatgggggcttactac
ctgcagcacacctgttttcaagatgaatctgccaagcaagaggtctatcggcttggtggc
atttccaagcttattgagcttctgcgcagcccagatgagaatgtgcaacaggctgcagct
ggggccctccgaaacttagttttcagaaatccaaccaacaagctagaaacccgccgtcag
aatggaattcgagaatgtgtcagcctcttgagaaggactgggagcacagagatacagaag
cagctgacaggattgctctggaacttatcgtccacagatgaactgaaagaagatttaata
catgaagctcttcctgttctgactgatcgtgttattattcctttttctggctggtctgat
ggtgttagtactagatcaagagaaattattgacccagaggtattcttcaatgccactggc
tgtctgaggaacctgagttctgcagatgttggacgtcaaaccatgaggaaccaccctgga
ctgattgactctgtaatggcttattctcagaactgtgtggctgccaaccgtccagatgac
aagtctgtggagaactgcatctgtatccttcacaatctgtcctaccgccttgatgctgag
gtgcctaataaatacacacagctcaaccacatggccaggaacagttacacagacaaaacc
ctgactggctgcttcaacaacagaggtggaaaactggagtatgatgactatgacctacct
cttcctgaagaggactataaacccagagggtccagctggctgtaccattcagatgccatc
cgcacatatctgtctttgatggaccagagcaagaaagatgctaccctggaggcttgtgct
ggagccctgcaaaatctgactgcaagcagaggactgatgtcaaatgcaatgagccagttg
attggtctaaaggagaaaggtttgccccgtatagcacgccttctgcagtccaataatgct
gaagtagttcgctctggaacatccttgctgagcaatatgtctcgacacccaattctacac
aaaacaatggctaatcaggtgctcccagatgtgacccgtctcctggccctccaggctcca
ggttccagcaactatggggacattatgacatctgcttgctacacactgaggaacctaatc
atgtccaacccacaaatggccaagccctacctgacaggcagcttgataaataatgttgta
ggcctatgccgtaatggatcttatccaaaagcagctgaagctgctcggatgctgttgtct
gacctatggtcaaacagggagctccaaactatactaaaacagcaaggatatgatagaaat
atgatgggatccttaacaggaagcactctcaggaccctttcttcaaggttctaa
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