Entry |
|
Symbol |
TRAF6
|
Name |
(RefSeq) TNF receptor-associated factor 6
|
KO |
|
Organism |
praf Podarcis raffonei (Aeolian wall lizard)
|
Pathway |
praf04620 | Toll-like receptor signaling pathway |
praf04621 | NOD-like receptor signaling pathway |
praf04622 | RIG-I-like receptor signaling pathway |
|
Brite |
KEGG Orthology (KO) [BR:praf00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128416982 (TRAF6)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128416982 (TRAF6)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128416982 (TRAF6)
04140 Autophagy - animal
128416982 (TRAF6)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
128416982 (TRAF6)
04621 NOD-like receptor signaling pathway
128416982 (TRAF6)
04622 RIG-I-like receptor signaling pathway
128416982 (TRAF6)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128416982 (TRAF6)
09171 Infectious disease: bacterial
05132 Salmonella infection
128416982 (TRAF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:praf04131]
128416982 (TRAF6)
04121 Ubiquitin system [BR:praf04121]
128416982 (TRAF6)
Enzymes [BR:praf01000]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128416982 (TRAF6)
Membrane trafficking [BR:praf04131]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
128416982 (TRAF6)
Ubiquitin system [BR:praf04121]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
128416982 (TRAF6)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
7:2213841..2235411
|
AA seq |
535 aa
MSLLHSNNSSFEASGQDSGCCAAMASCSIAGAKEKSINTSVSNGTGGTLSNSFMEEIQGY
DVEFDPPLESKYECPICLMALREAVQTPCGHRFCKACIVKSIRDAGHKCPIDNEILLETQ
LFPDNFAKREILSLMVKCPNQGCHQKMELRHLEDHELHCGFAPEKCPQCHGIFQKNQIQD
HIKQECPRRQTSCPNCAVWMPYEEKEVHDQMCLLANVCCEYCNTVLIREQLPNHYDNDCP
TAPVPCTYSPFGCPEKMQRNELARHMQEFTPVHMRMMAQTLLNITNFHGAIPYDPSPPCE
CSPEVHNFKETIQQLEGRLVRQDHQIRELIAKMETQNNQMRDLKRTIRNLEEKVAEVESQ
QCNGIFLWKIENFSVYLRAQEEDRPVVIHSPGFYTGKPGYKLCLRLHIQSPNAQRCANYI
SLFVHTMQGQYDSHLPWPFQGTIRLSILDQSEGSSRHNHEEVMDTKPELLAFQRPMVDRN
PKGFGYVTFMQLQALKQKTYIKDDSILVRCEVITRLDLNSLRREGFQPRSTDGAA |
NT seq |
1608 nt +upstreamnt +downstreamnt
atgagtctgctacacagtaacaacagcagctttgaagccagtggtcaggatagcggctgc
tgtgcagctatggccagctgttccattgctggagcgaaagaaaaaagcatcaacaccagt
gtcagcaatggcactgggggaacactttcaaactctttcatggaagaaatccagggctat
gatgtggagtttgaccctccgctggaaagcaaatatgaatgcccaatctgtctgatggct
ctccgggaggcagtgcagacaccatgtggacaccgtttctgcaaagcttgcattgtcaaa
tccataagagatgctggtcataaatgtccaatcgacaacgaaattttactcgaaactcaa
ctctttcctgacaactttgcaaaacgggaaatcctatcgctgatggtgaagtgtcccaac
cagggctgtcatcagaagatggaactcaggcatttagaggaccatgagctgcattgcggc
tttgctccagagaaatgtccccagtgccatggcattttccaaaagaatcagatacaggat
catataaagcaagaatgtccacgacgacaaacctcctgtccaaactgtgccgtgtggatg
ccttatgaagaaaaagaggttcatgaccagatgtgccttttagcaaatgtctgctgtgaa
tactgcaatacagtgctaatcagagaacagcttcctaatcactacgataacgattgccca
actgctccagtaccgtgtacatacagcccctttggatgtccagaaaaaatgcagagaaat
gagttggcacggcatatgcaggagttcaccccagtccatatgagaatgatggctcagact
ctcctgaatatcactaatttccatggcgctatcccatatgacccatcacctccctgtgaa
tgtagcccagaggtccacaacttcaaggagacgattcaacaactggaaggtcgcttggta
aggcaagatcaccagatccgagaactcatagcaaagatggagacacaaaacaaccagatg
agagatctcaaacgcactatccgaaatctggaggaaaaagtcgcagaagtggaatcacag
cagtgtaatggtattttcctgtggaagattgagaatttcagtgtttacttgagagcgcag
gaggaagataggcctgttgtaatccacagcccaggcttctacacagggaaacccggctac
aaactctgcttgcggctgcatatccagtccccgaatgcacagcgctgtgccaactatatt
tccctttttgttcatacgatgcaagggcaatatgacagccacctgccttggcccttccaa
ggcaccatacggctttctatcctggatcagtcagaaggatcgtcaaggcacaaccatgag
gaagtgatggataccaagcctgagctgctggctttccagcgtcccatggtcgaccgcaac
ccaaaaggctttggatatgtgacgtttatgcagttgcaggcgctaaaacaaaaaacctat
ataaaggacgatagtatcctagtgcgctgtgaggtcataacacgcttagacttaaacagt
ctccgaagggagggttttcagcctcgtagtactgatggggcagcatag |