KEGG   Podarcis raffonei (Aeolian wall lizard): 128416982
Entry
128416982         CDS       T09310                                 
Symbol
TRAF6
Name
(RefSeq) TNF receptor-associated factor 6
  KO
K03175  TNF receptor-associated factor 6 [EC:2.3.2.27]
Organism
praf  Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04010  MAPK signaling pathway
praf04120  Ubiquitin mediated proteolysis
praf04140  Autophagy - animal
praf04144  Endocytosis
praf04620  Toll-like receptor signaling pathway
praf04621  NOD-like receptor signaling pathway
praf04622  RIG-I-like receptor signaling pathway
praf05132  Salmonella infection
praf05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:praf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    128416982 (TRAF6)
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    128416982 (TRAF6)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    128416982 (TRAF6)
   04140 Autophagy - animal
    128416982 (TRAF6)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    128416982 (TRAF6)
   04621 NOD-like receptor signaling pathway
    128416982 (TRAF6)
   04622 RIG-I-like receptor signaling pathway
    128416982 (TRAF6)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    128416982 (TRAF6)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    128416982 (TRAF6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:praf04131]
    128416982 (TRAF6)
   04121 Ubiquitin system [BR:praf04121]
    128416982 (TRAF6)
Enzymes [BR:praf01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     128416982 (TRAF6)
Membrane trafficking [BR:praf04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Ubiquitin E3 ligases
    128416982 (TRAF6)
Ubiquitin system [BR:praf04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    128416982 (TRAF6)
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 zf-TRAF zf-C3HC4_2 zf-C3HC4 TRAF6_Z2 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 Med21 SlyX zf-TRAF_2 zf-RING_5 TRAF3_RING RING_XB3-XBAT31 DUF4455 zf-RING_11 U-box Cast ATG16 DUF16 PUMA_CC CEP104_ZnF TMF_TATA_bd TMF_DNA_bd PspA_IM30 Spc29 HMMR_N DUF7310 Sina_ZnF MTR4_beta-barrel UPF0242
Other DBs
NCBI-GeneID: 128416982
NCBI-ProteinID: XP_053251088
LinkDB
Position
7:2213841..2235411
AA seq 535 aa
MSLLHSNNSSFEASGQDSGCCAAMASCSIAGAKEKSINTSVSNGTGGTLSNSFMEEIQGY
DVEFDPPLESKYECPICLMALREAVQTPCGHRFCKACIVKSIRDAGHKCPIDNEILLETQ
LFPDNFAKREILSLMVKCPNQGCHQKMELRHLEDHELHCGFAPEKCPQCHGIFQKNQIQD
HIKQECPRRQTSCPNCAVWMPYEEKEVHDQMCLLANVCCEYCNTVLIREQLPNHYDNDCP
TAPVPCTYSPFGCPEKMQRNELARHMQEFTPVHMRMMAQTLLNITNFHGAIPYDPSPPCE
CSPEVHNFKETIQQLEGRLVRQDHQIRELIAKMETQNNQMRDLKRTIRNLEEKVAEVESQ
QCNGIFLWKIENFSVYLRAQEEDRPVVIHSPGFYTGKPGYKLCLRLHIQSPNAQRCANYI
SLFVHTMQGQYDSHLPWPFQGTIRLSILDQSEGSSRHNHEEVMDTKPELLAFQRPMVDRN
PKGFGYVTFMQLQALKQKTYIKDDSILVRCEVITRLDLNSLRREGFQPRSTDGAA
NT seq 1608 nt   +upstreamnt  +downstreamnt
atgagtctgctacacagtaacaacagcagctttgaagccagtggtcaggatagcggctgc
tgtgcagctatggccagctgttccattgctggagcgaaagaaaaaagcatcaacaccagt
gtcagcaatggcactgggggaacactttcaaactctttcatggaagaaatccagggctat
gatgtggagtttgaccctccgctggaaagcaaatatgaatgcccaatctgtctgatggct
ctccgggaggcagtgcagacaccatgtggacaccgtttctgcaaagcttgcattgtcaaa
tccataagagatgctggtcataaatgtccaatcgacaacgaaattttactcgaaactcaa
ctctttcctgacaactttgcaaaacgggaaatcctatcgctgatggtgaagtgtcccaac
cagggctgtcatcagaagatggaactcaggcatttagaggaccatgagctgcattgcggc
tttgctccagagaaatgtccccagtgccatggcattttccaaaagaatcagatacaggat
catataaagcaagaatgtccacgacgacaaacctcctgtccaaactgtgccgtgtggatg
ccttatgaagaaaaagaggttcatgaccagatgtgccttttagcaaatgtctgctgtgaa
tactgcaatacagtgctaatcagagaacagcttcctaatcactacgataacgattgccca
actgctccagtaccgtgtacatacagcccctttggatgtccagaaaaaatgcagagaaat
gagttggcacggcatatgcaggagttcaccccagtccatatgagaatgatggctcagact
ctcctgaatatcactaatttccatggcgctatcccatatgacccatcacctccctgtgaa
tgtagcccagaggtccacaacttcaaggagacgattcaacaactggaaggtcgcttggta
aggcaagatcaccagatccgagaactcatagcaaagatggagacacaaaacaaccagatg
agagatctcaaacgcactatccgaaatctggaggaaaaagtcgcagaagtggaatcacag
cagtgtaatggtattttcctgtggaagattgagaatttcagtgtttacttgagagcgcag
gaggaagataggcctgttgtaatccacagcccaggcttctacacagggaaacccggctac
aaactctgcttgcggctgcatatccagtccccgaatgcacagcgctgtgccaactatatt
tccctttttgttcatacgatgcaagggcaatatgacagccacctgccttggcccttccaa
ggcaccatacggctttctatcctggatcagtcagaaggatcgtcaaggcacaaccatgag
gaagtgatggataccaagcctgagctgctggctttccagcgtcccatggtcgaccgcaac
ccaaaaggctttggatatgtgacgtttatgcagttgcaggcgctaaaacaaaaaacctat
ataaaggacgatagtatcctagtgcgctgtgaggtcataacacgcttagacttaaacagt
ctccgaagggagggttttcagcctcgtagtactgatggggcagcatag

DBGET integrated database retrieval system