Podarcis raffonei (Aeolian wall lizard): 128419047
Help
Entry
128419047 CDS
T09310
Symbol
KDM2A
Name
(RefSeq) lysine-specific demethylase 2A isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
128419047 (KDM2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
praf03000
]
128419047 (KDM2A)
04121 Ubiquitin system [BR:
praf04121
]
128419047 (KDM2A)
03036 Chromosome and associated proteins [BR:
praf03036
]
128419047 (KDM2A)
Enzymes [BR:
praf01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
128419047 (KDM2A)
Transcription factors [BR:
praf03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
128419047 (KDM2A)
Ubiquitin system [BR:
praf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
128419047 (KDM2A)
Chromosome and associated proteins [BR:
praf03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
128419047 (KDM2A)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
128419047 (KDM2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
JmjC
Cupin_8
Cupin_1
Motif
Other DBs
NCBI-GeneID:
128419047
NCBI-ProteinID:
XP_053255284
LinkDB
All DBs
Position
1:83086872..83141139
Genome browser
AA seq
1193 aa
AA seq
DB search
MKGQRKTRDLEEEEEDSSSDISFSLSSEESEMEPEEERVRYSKRLRGAMRRRYEDDGISD
DEIEGKRTFDLEEKLTTNKFNADFVVFMEGKDFNVEYIQRGGLRDPLIFKNCDGLGIKMP
DPDFSVNDVRLYVGSRRMVDVMDVNTQRDIEMTMAQWARYYETREEEREKLYNVISLEFS
HTRLENLVQRPNTVDLIDWVDNMWPRHLKESQTESTNAILDMQYPKVQKYCLMSVKGCYT
DFHVDFGGTSVWYHIHRGGKVFWLIPPTPQNLELYENWLLSGKQGDIFLGDRVSNCQRIE
LKQGYTFVIPSGWIHAVYTPMDTLVFGGNFLHSFNIPMQLRIYSIEDRTRVPNKFRYPFY
YEMCWYVLERYVFCITNRSHLTKDFQKESLSMDMELCGLESGTVDEDDAAAEKESRRPVT
RRSVLTSPVANGANLDYEELNKGCRSLPDLKRTLSMDSESSRGSHNGQAWDTHSNSPHKG
NKVHLTQFELEGLRCLVDKLESLPLHKKCVPTGIEDEDALIADVKLLLEEYANSDPKLAL
TGIPIVQWPKRDKLKLQARPKLRLPTIPITKPHTMKPAPRPATVRPTVSPIVSGARRRRV
RCRKCKACLQGECGMCHYCRDMKKFGGPGRMKQSCVLRQCLAPRLPHSVTCSLCGEVDKN
EDSQDFEKKLMECCICNEIVHPGCLQMDGEGLLNDELPNCWECPKCYKGDESEKGQKRKM
DDGDDDTVQAKVLRPLRSCEEPLTPPPHSPTPMLQLIHDPVSPRSIVTRSSPGAGPSDHH
GPSRDERFKRRQLLRLQGTERTVVREKENNPSGKKELSEVEKAKLHGSYLTVTLQRPTKD
MHGTSIVPKLQAITASSTNLRHSPRVVMRQSSARAPQRGGDEEAAEDEEEEESAEEEEES
AEESGAARLNGQGGRAPDSEEIWMQKEVWMSVFRYLTRKELCECMRVCKTWYKWCGDRRL
WTKIDLSRYKSITPLALGGIIRRQPVSLDLSWTNISRKQLTWLINRLPGLKDLILAGCSW
SAVSALSTSTCPLLRTLDLRWAVGIKDPQIRDLLTPPSDKPSQDNRSKLRNMIDFRLAGL
DITDATLRLIIRHMPLLSRLDLSHCNHLTDQSTNLLTAVGSSTRNSLTEINMAGCNKLTD
QSLLYLRRISNVTLIDLRGCKQITRKACEHFISDLSINSLYCLSDEKLIQKIS
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgaaggggcaaaggaaaaccagagacctggaggaagaagaggaagacagcagttctgat
atctcattctcgctctcatcagaagagtctgagatggaacctgaagaagagcgggtccgt
tatagcaaaaggctgcgtggtgctatgagacgacgttatgaggatgatggcatctcagat
gatgaaattgaggggaaacgaacatttgacctcgaagagaaacttaccaccaacaaattt
aatgccgattttgtggtcttcatggaaggcaaagacttcaatgtggaatatattcagcgt
ggtggcttaagagatccattgatcttcaaaaattgtgatggacttggaataaagatgcca
gatccagacttcagtgtgaatgatgtacgactctacgtagggagtcgaaggatggtggac
gtcatggatgtaaacacacaaagggatattgagatgaccatggcacagtgggcacgctat
tatgaaactcgagaggaggagcgagagaagctgtataatgtcatcagcctggaattcagc
cacacacggctcgagaacctggtgcagaggccaaatacagtggatttgattgattgggtt
gataatatgtggccaaggcatctgaaggaaagtcagacagaatcaactaacgctattctg
gatatgcagtatcccaaggtgcagaagtactgtctgatgagtgtcaagggctgctataca
gacttccatgtagacttcggtggcacttcagtgtggtatcacatccacagaggggggaag
gtcttttggttaattccacccactccccagaacctggagttgtatgaaaactggctgctg
tcgggaaaacaaggggatatctttcttggtgacagggtgtcaaattgtcagcgtattgag
ctcaaacaaggctatacctttgtcataccctcaggttggatccatgcagtgtacactcct
atggacaccctggtctttgggggtaactttctgcacagcttcaacatccctatgcagctg
cggatctacagcattgaagaccgcacacgggttccaaataaatttcgctatcccttttat
tatgaaatgtgctggtacgtactagaacgctatgtcttctgcatcaccaaccgttcccac
ctaaccaaggactttcagaaggagtcactcagcatggatatggagttatgcggcttggag
tcaggcactgtggatgaagatgatgcagcagcagaaaaggaatcgcgccgccctgtcact
aggcggtcggtcctcactagccctgtagccaatggtgctaatctagactatgaagaacta
aataaaggctgccggagtttgccagatctcaagagaactctctccatggactcagagtcc
agtcgaggctctcacaatggccaagcctgggacactcatagcaacagccctcataagggc
aacaaggtgcatctgacccaatttgagcttgaaggtctgcgttgtcttgtagacaagctg
gagtctttacccctacacaagaagtgtgtacccacaggcatagaggatgaggacgccctt
attgcagatgttaagctgctgctggaggagtacgcaaacagcgatcccaaactggcactt
actggaattcctattgtccagtggccaaagagggataagctcaagcttcaggctcggcca
aagttaagattacctaccatccctatcaccaagccacacaccatgaaacccgcgccacgg
ccagcaactgtgagacctacagtctctcctatagtgtctggtgcccgcagaaggcgggtg
cgatgccgtaaatgcaaggcctgcttgcaaggtgaatgtggcatgtgccactactgcagg
gatatgaagaagtttggggggcctggtcgtatgaagcagtcctgtgtactacggcagtgc
ttggcgcccagactgcctcactctgttacatgttcactttgtggggaggtagataagaat
gaggattcgcaggactttgagaagaagctaatggagtgctgcatctgcaatgagattgtt
cacccaggttgtctacagatggatggggaagggctactgaacgatgaattgcccaactgc
tgggagtgtccgaagtgctacaagggagatgagtcggaaaaaggccagaagcggaaaatg
gatgatggcgatgatgacacagtccaagccaaagttctgcgtcctttgcgaagctgtgag
gaacctttgactccaccaccacattcgcctaccccaatgctgcagctaatacatgaccct
gtgtcaccacgaagcatagtgacacggtcctctccgggggccggtcctagtgaccatcat
gggcccagccgggatgaacgctttaagagacgccagctacttcggctgcaaggcacagag
cgcacagtggtgcgggaaaaagagaacaaccctagtggcaagaaagagctgtcagaagta
gaaaaggccaagctccatggttcctatcttacagtcacattacaaagacctaccaaagac
atgcatggcacttccattgtgcccaagctgcaggcaatcactgcctcctccactaatctg
cggcactctcctcgtgtggtcatgcgccaaagttcagccagagcaccccagcggggtgga
gatgaagaagcagctgaggatgaagaggaggaggaaagtgcagaggaggaagaggaaagt
gcagaggagagtggggcagccagactgaatggccaaggaggcagggctccagatagtgag
gaaatctggatgcaaaaagaggtgtggatgtctgtcttccgttatctcactcgcaaggag
ctttgtgaatgtatgcgtgtatgcaaaacctggtacaaatggtgtggtgacaggagattg
tggacgaagattgacttaagcaggtacaagtccatcacacctctggcactgggtggcata
atcaggaggcagccagtcagccttgacctcagctggaccaatatttccagaaaacagctc
acctggctcatcaacagactaccaggcctcaaagacctcatattggcaggctgctcctgg
tcagcagtgtctgctctcagtacctccacctgcccccttctcaggacacttgatcttcgg
tgggcagtaggaatcaaggaccctcagattcgggacttgctcacacctccatcagataaa
cccagccaagacaatcgcagcaaactccgtaacatgatagacttccggttggctgggctg
gacataactgatgccacactccggctcatcattcgccacatgcctctgctctcacgactt
gatcttagtcactgcaatcaccttacggaccagtcaaccaacctattaacagctgtgggg
tcttccacgcgaaactcgctcactgaaatcaacatggcaggctgcaataagctcacagac
cagtccctgctgtacctgcggcgcatctctaatgtcaccctgatagacctgcgtggttgc
aagcagatcacccgcaaggcctgtgagcacttcatctcagacctgtcaatcaacagcctc
tattgcctgtctgatgaaaagctgatccagaaaatcagctag
DBGET
integrated database retrieval system
