Podarcis raffonei (Aeolian wall lizard): 128419958
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Entry
128419958 CDS
T09310
Symbol
NPC1L1
Name
(RefSeq) NPC1-like intracellular cholesterol transporter 1
KO
K14461
Niemann-Pick C1-like protein 1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
praf02000
]
128419958 (NPC1L1)
Transporters [BR:
praf02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
128419958 (NPC1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NPC1_MLD
NPC1_N
Sterol-sensing
Patched
MMPL
ACR_tran
Motif
Other DBs
NCBI-GeneID:
128419958
NCBI-ProteinID:
XP_053257250
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All DBs
Position
8:84362142..84395126
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AA seq
1333 aa
AA seq
DB search
MLSAILLALVLSRAGLGLAAALTPIHQAKYCSFYGVCGKNPEISSSLLLAVVPCISNTPA
RKLNGSHLSLLQTICPMLFTGANDTFACCSEAQLRDLQTSLSMSQAILSRCPSCSENFAS
IYCQSTCSPDQSLFTNITRYFNRTIEGEEKQGVLEYQCYYSQRFAQESFDSCKGVRMPAT
GGYAISTMCGKYGATLCNSQRWLDFQGDISNGVAPLAISFQLVPEGSAPIQGGIVPFNGT
AWKCSEAVGNGTKERCSCQDCSQACPAALDPHPAQRPFQVGAMGGVLFLCIFLFCLLMVL
FVAFLIQRGCSCSCRKQKDKGPKKAMPKPTCSQNVSQATHDFLARIFSCWGTLVASYPIQ
VIAISVVMVIGLSSGLVFIQLTTDPVELWSKPDSQARKEKAFYDENFGPFFRTNQVIMTA
KDRPSYTYDSLILGNKNFSGILSMEVLLDLLDLQQRLQAIEVWSAEYGRNISLKDICYAP
LNPENSTLSDCCVNSLLQYFQNNVTRLNMTANQTMRGKNGTVDWKDHFLYCVNSPLSFQD
ITSLELSCMAEYGGPVFPFLAVGGYPEEEYSEGQALILTFSLNNFPPSDPRFDFAMLWEK
QFLEIVQEFQREHEDSYTVAYMAERSLEDEINRTTWDDLPIFAVSYLVIFVYIALALGEY
SSWKRILVDSKVTLGFGGILVVLGAVLSSLGFYSYIGLPSSLIIIEVVPFLVLAVGADNI
FIFVLEYQRCELRPGESTEQHIGRVLGDVAPSMLLCSLSEVICFFLGGLSEMPAVRTFAL
NAALAVLFDFLLQVSMFVALLSLDARRQKASRFDLCCCVQLEEKSPEKKQRSLLRTFIER
FYAPFLLNSFVRFMVMLIFIFMFCAGIFLMLHVEVGLNQELAMPMDSYMLQYFQYLNTYF
MVGAPTYFVTTPGYNFSTVAGMNGVCSSSGCDDNSLTQKIQSAVQFPNVSFLAIPASSWV
DDFIDWLSPFSSCCRIHNGQFCPSTDTSLSCLLNKCMAPTSGTLRPSVEEFHRFLPWFLH
DMPNLKCPKAGRGAYDTSVRLGPDGEVIASRFMAYHTPLKNSQEYTAALKVARELAANIT
AAMRQVPGTDPDFTVFPYTITYVFYEQFLNIALAGVINLAVCLLPTFLVCCVLLGMDLRS
GLINLFTIIMILVDTQGAMTLWGISFNAISLINLVTAVGISVEFVSHITRSFAISTQPTK
VERAREATVNMGSAVFAGVAMTNLPGIVVLAFAKAQLIQIFFFRLNLIITLLGMLHGLVF
LPVALSYFGPDSIHLNVQQKTKSSLVIANSLALESSNGIQNQAFSGCCEAPKDRPKQEGS
EGVGGSYPEGMGL
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atgctgagcgccatcctgcttgccttggtgctttccagggccgggctgggcctggcggct
gccctcacaccaatccatcaggcaaaatactgttccttctacggagtgtgcggcaagaac
cccgaaatcagttccagtcttctcctagcagttgtcccttgcatctccaacacgccggcc
cggaaactcaatggctcccacctcagcctcctccagaccatctgcccgatgctgttcacg
ggggccaatgacaccttcgcctgctgctccgaggcccagctgcgagacctgcagaccagc
ttgtccatgtcccaggcgattctgtctcgctgcccatcctgctcggagaactttgccagc
atctactgccagagcacttgcagcccggaccagagcctcttcaccaacatcacccgctat
ttcaaccgcaccatcgagggggaggagaagcaaggggtactggagtaccagtgctactac
agccagcgctttgctcaggagtccttcgactcttgcaaaggggtgaggatgccggcgacg
ggcggctacgccatcagcaccatgtgtggcaaatatggggccaccttgtgcaacagccag
aggtggctggatttccagggggacataagcaatggggtggcccctttggccatctccttc
cagctggtgcccgaaggctctgccccaattcagggtggcatcgtgcccttcaatggaacg
gcctggaagtgcagcgaggcagtgggcaatgggaccaaggagaggtgttcctgccaggac
tgttcccaggcatgtcctgcagccctggaccctcaccctgcccagaggcccttccaagtg
ggggcaatgggtggggtcctcttcctgtgcatcttcctcttctgcctcctcatggtgctg
tttgtggccttcctgatccagcgagggtgctcctgctcgtgtcggaaacagaaggacaaa
ggtcccaagaaagccatgcccaaaccaacctgttctcagaatgtgagccaggccacccat
gacttcctggccaggatattcagctgctggggcacactggtggcctcctaccccatccag
gtgatcgccatctcggtggtgatggtgatagggctctccagcgggctggtctttatccag
ctgaccacagaccctgtggagctgtggtccaaacccgacagtcaggcccggaaggagaag
gccttctatgacgagaactttgggcccttcttcaggactaaccaggtcatcatgaccgcc
aaggaccgtcccagctacacctatgactccctcatcctgggcaataagaatttcagtggc
atcctctccatggaggttctactggacctgctggacctgcagcagaggctgcaagccatc
gaggtctggtctgcggagtatggcaggaacatctctctgaaggacatctgctatgccccc
ctgaaccctgagaattctaccctttctgactgctgcgtcaacagcctgttgcagtatttt
cagaacaacgtgacccgcctaaatatgacagccaaccagacaatgaggggcaagaatggc
actgtggactggaaagaccacttcctctattgcgtcaactcacctctctctttccaagac
atcacttcactggagctgagctgcatggcagagtatggaggacccgtcttccctttcctg
gccgtgggggggtatccagaggaggagtactcagaaggccaggccctcatcctgaccttc
tccttgaacaacttccctcccagtgaccctcgatttgactttgccatgttgtgggagaag
cagttcctggagattgtgcaggaattccagcgggaacacgaagacagctacacagtcgcc
tacatggcagagcgttcactggaggacgagatcaaccgcaccacctgggacgacctcccc
atctttgctgtcagctacctggtgatctttgtgtacattgcactggccttgggcgagtac
tccagctggaagcggatcctggtggactccaaggtgacgctgggcttcggaggaatcctg
gtggtcctgggggctgtgctgtcgtccctgggcttctactcctacatagggctgccctcc
tccctcatcatcattgaggtcgtccccttcctggtgctggcggtcggtgctgacaacatc
ttcatctttgtgctggagtaccagcggtgtgagctacggcctggggagtcgacggagcaa
cacatcggacgggttttgggtgacgtggcccccagcatgctcctttgcagcctctctgaa
gtcatctgcttcttcctgggtggcctgtcggagatgccggctgtccggacctttgccttg
aacgctgccctggccgtcctctttgacttcttgctccaggtgtccatgtttgtggccttg
ctgtctctggatgcccgcaggcagaaggcctctcgctttgacctgtgttgctgcgtccaa
ctggaggagaagagcccagagaagaagcaaagaagcctccttcgcaccttcatagaacgc
ttctatgctcccttcttgctcaacagctttgtccggttcatggtgatgctgatcttcatt
ttcatgttctgcgctggaatcttcctgatgttgcatgtcgaagtggggctgaatcaggag
ctggcaatgcccatggactcctacatgctgcagtacttccagtacctgaacacgtacttc
atggtgggcgccccaacttactttgttaccacgccgggctacaacttctccacagtggca
gggatgaacggggtctgctccagctcaggctgcgatgacaactccttgacgcagaagatc
cagtccgctgtgcagttcccgaacgtgtccttcctggccatccctgcctcttcctgggtg
gacgacttcatcgactggctgagccccttttccagctgctgccgcatccacaacggccag
ttctgcccctccaccgacacttccctgtcctgcctgttgaacaagtgcatggctccgacg
agcgggaccctccggccaagtgtcgaggagttccaccggttcctgccctggttcctccac
gacatgcccaacctgaaatgccccaaggcgggtcgtggtgcctatgacacatctgtgcgt
ctggggccagatggggaagtcatagcatcccgcttcatggcataccacacgcccctcaaa
aactcgcaggagtacacagcagccttgaaggtggcccgggagctggcggccaacatcacc
gctgccatgcggcaggtgcccggcacggaccccgacttcacggtcttcccctacacgatc
acctacgtgttttacgagcagttcctgaacatcgcccttgcgggggtcatcaacctggcc
gtctgcttgctccccaccttcctggtctgctgtgtgctgctgggcatggacctgcgctca
ggactcatcaacctgttcacgataatcatgatcctagtggacactcaaggagccatgacc
ctgtggggcatttccttcaacgccatctccctcatcaacctggtgacggctgtgggcatt
tcggtggagtttgtctcccacatcacccgctccttcgctatcagcacacagcccactaaa
gtggagagagccagagaggccacagtcaacatggggagtgcggtgtttgctggcgtggcc
atgaccaacctcccaggcatcgtggtcctggcctttgccaaagcccagctgatccagatc
ttcttcttccgcctcaacctcatcatcacgctgctggggatgctccatggactcgtcttc
ctccctgtggccctcagttatttcgggcctgatagcatccacttgaatgtgcagcagaag
acaaaaagcagcctggtcatcgccaacagccttgctcttgaaagtagcaacgggatccag
aaccaagcctttagtggctgctgcgaagctccaaaggacaggcccaagcaggagggatct
gaaggagtgggtggcagctacccagaaggaatgggcctctag
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