Podarcis raffonei (Aeolian wall lizard): 128421665
Help
Entry
128421665 CDS
T09310
Symbol
IRF5
Name
(RefSeq) interferon regulatory factor 5
KO
K09446
interferon regulatory factor 5
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
128421665 (IRF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
praf03000
]
128421665 (IRF5)
Transcription factors [BR:
praf03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
128421665 (IRF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
128421665
NCBI-ProteinID:
XP_053260676
LinkDB
All DBs
Position
10:complement(72419211..72469499)
Genome browser
AA seq
502 aa
AA seq
DB search
MSSHPRRVRLKPWLVAQVNSGQYPGLRWVDAERKRFFIPWRHATRHIPSQDDENTIFKAW
AKETGKYNEGVDEPDPAKWKANLRCALNKSREFNLIYDGTKDTPMQAFKIYEVCDAPQPN
GEPFAGDENIGPEEEEELQKMMPTLQIADPPHGVEPLPPYPWLKQEALYPGACANGSFPH
VARMNAPPPPPPVGAFAVGGEPAAPNFAEPAGAMPLVPGDVPMSADLEPLRPGGCSVAPM
EQFIPDLLISPHMLPLTDLEIKFQYRGRSVGSLTISNPHGCRLFYSNLKPTQEQVELFGP
LTLEQVRFPSAEGVPNEKQRFYTHQLLDVLDRGLILELQGQDIYAIRLCQCKVFWTGPCA
GELAGPNPIEREKKIKLFSLESFLNGLIMFQKGQSTAPPPYEIFFCFGEEWPDQKPKEKK
LITVQVVPVAARLLLEMFSGELCWSADSVRLQISHPDLKDKMVEQFKELHQLWQTQQSVQ
VQSLQLAGPESWPMQTSTTNSM
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgcatccccgccgcgtccgcctgaagccctggctggtggcccaagtcaacagc
ggtcagtacccgggactccgctgggtggacgccgagagaaagcgcttcttcattccctgg
cgccacgccacccgccacatccccagccaggacgacgagaacaccatattcaaggcctgg
gccaaagagacgggcaaatacaacgaaggcgtcgacgagccggaccccgccaagtggaaa
gccaacctgcgctgtgccctcaacaagagccgcgagttcaacctgatttacgacggcacc
aaggacaccccaatgcaggccttcaagatctacgaggtttgcgatgccccacagcccaac
ggagagcctttcgctggagatgagaacatcggccctgaagaagaggaggagttgcagaag
atgatgccaacgctacaaattgcagatccgccccacggcgtggagcccctgcccccctac
ccgtggctgaagcaggaggccttgtacccgggcgcttgcgccaacggatccttcccccac
gtggcgcgcatgaatgctccccctccgcctccgcccgtcggcgcttttgcggtaggcggg
gagcccgccgcgcccaactttgccgaaccggccggagcgatgcccctcgttccaggggac
gtccccatgtcggcggacctggagcccctgcgcccggggggctgctcggtggcgcccatg
gagcagttcattccagatttgctgatcagcccccacatgctgccattgaccgacttggag
atcaagttccagtaccgcggccgctcggtgggctccctgaccatcagcaacccccacggc
tgccgcctcttctacagcaacctgaagcccacccaggagcaggtggagctctttgggccg
ctgacgctggagcaggtgcgcttccccagcgcggagggcgtgcccaacgagaagcagcgc
ttctacacccaccagctgctggatgtcctggaccggggcctcatcctggagctgcaggga
caggacatctatgccatccgcctctgccagtgcaaggtcttctggaccgggccctgcgcc
ggggagctggcgggccccaatcccatcgagcgcgagaagaagatcaagctcttcagcctg
gagagcttccttaacggacttatcatgttccagaagggtcagagcaccgccccacccccc
tacgagattttcttctgcttcggagaagagtggccggaccagaagcctaaagagaagaag
ctgatcacagtccaggtggtgcccgtagctgcgcgtctcctgttggaaatgttctctggg
gagctgtgctggtcagccgacagtgtccgcctgcagatctcccacccggatctcaaggac
aagatggtggaacagttcaaagagctgcaccagctctggcagacgcagcagagcgtccaa
gtccagagcctgcaactggccgggcccgagagctggcccatgcagaccagcaccacaaac
agcatgtag
DBGET
integrated database retrieval system
