Podarcis raffonei (Aeolian wall lizard): 128423233
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Entry
128423233 CDS
T09310
Symbol
PRDM6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6 isoform X1
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf00310
Lysine degradation
praf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
128423233 (PRDM6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
praf03000
]
128423233 (PRDM6)
03036 Chromosome and associated proteins [BR:
praf03036
]
128423233 (PRDM6)
Enzymes [BR:
praf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
128423233 (PRDM6)
Transcription factors [BR:
praf03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
128423233 (PRDM6)
Chromosome and associated proteins [BR:
praf03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
128423233 (PRDM6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf-H2C2_2
SET
zf-C2HE
zf-C2H2_jaz
zf-C2H2_11
Zap1_zf1
zf-C2H2_15
Zf-C2H2_ZNF451_C
Motif
Other DBs
NCBI-GeneID:
128423233
NCBI-ProteinID:
XP_053264129
LinkDB
All DBs
Position
11:47253833..47350746
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AA seq
596 aa
AA seq
DB search
MLKPGDPGGSAFLKVDPAYLQHWQQLFPHSSQQLKGGAGLLGHLQAPERAVEPQADSLRP
LPASLSSAASSSSSLSSSSSSSSSSSSTPSSAPSSCAVASLASLTALPVAQIPVFGPIQS
SESPTGAPVALLQTKDLGGGSGVAKGGERAPARFRCTAEELDYYLYGQQRMEIIPLNQHT
GDPNNRCDMCADNRNGECPMHGPLHSLRRLVGTSSAAAAAPPPEIPEWLRDLPREVCLCT
STVPGLAYGICAAQRIQQGTWIGPFQGVLLLPEKVQAGASRNTQHLWEIYDQDGTLQHFI
DGGEPSKSSWMRYIRCARHCGEQNLTVVQYRSNIFYRACMDIPRGTELLVWYNDSYTSFF
GIPLQCIAQDENLNVPSTVMEAMSRQDTVQPFNKSSKLPSATPQRSIVFPQTPCNRNFSL
LDKSGSIESGFNQISVKNQRVLASPTSTSQLNSEFSDWHLWKCGQCFKTFTQRILLQMHV
CTQNPDRNSQQSHLGGSRKGPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFA
GATTLNNHIRTHTGEKPFKCERCERSFTQATQLSRHQRMPNECKPITESTESIEVD
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagcccggcgatcccggcggatcggctttcctcaaggtggatcccgcgtacctc
cagcactggcagcagctgttcccgcacagcagccagcagctcaaaggcggcgccgggctg
ctagggcacctccaggcgcccgagagagccgtcgagccccaggctgacagcctccgcccg
ctgccggcctctctctcgtcggcggcgtcctcgtcctcttccttgtcctcctcgtcgtcg
tcttcctcctcctcctcctccaccccgtcgtccgccccgtcttcgtgcgccgtcgcctcc
ctggccagcttgactgcgctgccggtggcgcagatccccgtctttggaccgattcagagc
tccgagtccccgacgggagccccggtcgccctcctgcagaccaaggacctgggcggaggc
agcggggtggccaagggcggcgagagggcgccggcccggtttcgctgcaccgccgaggag
ttggactattacctgtatgggcagcagcgcatggagatcatcccgctcaaccagcacacc
ggggaccccaacaaccgatgtgacatgtgtgcagataatcgtaatggagagtgccccatg
catggccctttgcactctttacgccgtctggtgggcactagtagtgcagctgccgccgcc
cctccacctgagattcctgagtggcttcgggatctgccccgggaagtgtgtctgtgcacc
agcactgtgcctggtttggcctatggcatctgtgctgctcaaaggattcagcagggcacc
tggatcgggcctttccagggagttctccttctgccagaaaaggtgcaagcaggagcaagc
aggaacacccaacacctctgggaaatatatgaccaagatgggacactacagcactttatt
gatggtggggaacccagtaagtcaagctggatgaggtatattcgatgtgcaaggcactgt
ggggagcagaacttaaccgtagtccagtacaggtcaaatatattctacagagcttgcatg
gatattcccaggggcacagagttgttggtctggtataatgacagctacacatctttcttt
ggaatcccgttacagtgcattgcacaagatgagaacttgaatgtcccttcaactgtaatg
gaagccatgtcaagacaagataccgtgcagccatttaacaaaagtagcaaactaccctct
gccactccacagcggtccattgtatttccacagactccgtgtaacaggaatttctctctt
ctggataaatcaggctctatcgaatcaggatttaaccagatcagtgtaaaaaaccagcga
gtccttgcgagccctacatcaacaagccaactaaattcagagttcagtgactggcatctt
tggaaatgtgggcaatgctttaagactttcacccaacggatcctcttacagatgcatgtg
tgcacacagaaccctgacagaaattcccaacaatcccatttggggggctccagaaagggg
ccctatcagtgtggacactgctcccaatccttctcccaaccttcagagctacggaaccac
gtagtcacccattccagtgacagacctttcaagtgtggctattgcggtcgtgcctttgct
ggtgctactacactcaacaatcatatccggacacatacaggggagaagccctttaagtgc
gagaggtgtgagaggagcttcacacaagccacccagctgagtcgacaccagaggatgccc
aatgagtgcaagccaataacagagagcacagaatcaattgaagtggattaa
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