Podarcis raffonei (Aeolian wall lizard): 128423589
Help
Entry
128423589 CDS
T09310
Symbol
HMGCS1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic isoform X1
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf00280
Valine, leucine and isoleucine degradation
praf00650
Butanoate metabolism
praf00900
Terpenoid backbone biosynthesis
praf01100
Metabolic pathways
praf03320
PPAR signaling pathway
Module
praf_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
128423589 (HMGCS1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
128423589 (HMGCS1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
128423589 (HMGCS1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
128423589 (HMGCS1)
Enzymes [BR:
praf01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
128423589 (HMGCS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
128423589
NCBI-ProteinID:
XP_053264898
LinkDB
All DBs
Position
11:complement(19746375..19772383)
Genome browser
AA seq
543 aa
AA seq
DB search
MRAGPTRCRPEPVMGFHCVCTTMPGSLPVNAEACWPKDVGIVALEIYFPSQYVDQAELEK
FDGVDAGKYTIGLGQSKMGFCSDREDINSLCLTAVQKLMERNSLSYNCIGRLEVGTETII
DKSKSVKTVLMQLFEESGNTDVEGIDTTNACYGGTAALFNAINWVESSSWDGRYALVVAG
DIAVYATGNARPTGGAGAVAMLVGPNAPLIFERGLRGTHMQHAYDFYKPDMVSEYPVVDG
KLSIQCYLSALDRCYTVYRKKIHAQWQKEGVDKDFTLNDFGFMIFHSPYCKLVQKSVARL
LLNDFLNDQTPTKENGIYSGLEAFRDVKLEDTYFDRDVEKAFMKASAEIFNQKTKASLLV
SNQNGNMYTPSVYGCLASILAQYSPQQLAGQRIGVFSYGSGFAATLYSIKVSQDATPGSS
LDKITASLSDLKARLDSRKCISPEVFAENMMLRQDTHHLANYIPQCSVDDLYEGTWYLVR
VDEKHRRTYARRPVLGDGPLEAGVEVHMGLAHEHIPSPAKKVPRIPAKTDSEAVAVSLSN
GEH
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgctgggccgacccggtgccgtccggagccggtgatggggtttcactgcgtctgc
accaccatgcctggatctcttcctgtgaatgctgaagcctgctggccaaaagatgtggga
atagttgctttggagatctacttcccttcccaatatgttgaccaggcagagttagagaag
tttgatggcgtggatgcagggaaatacaccattggcttgggtcagtccaagatgggcttc
tgctcggatagggaggatatcaattcgctttgcctcaccgcagtccagaagcttatggaa
aggaacagtctctcctacaactgcattgggagacttgaagttggaacggagacaatcatc
gacaagtccaaatcggtaaagactgtactgatgcagctttttgaagaatctggcaacaca
gacgtggaaggcattgacacaaccaatgcatgctatggtggcactgctgcactcttcaat
gctatcaactgggttgaatccagctcctgggatgggcgttatgcacttgttgttgctgga
gacatagcagtgtatgccactggaaatgctaggccaactggaggagccggtgctgttgct
atgcttgtgggaccaaatgcacctcttatttttgagagaggattgcgagggacccacatg
cagcatgcctatgatttctataagcctgatatggtatctgagtatcctgtggttgatggg
aaactgtccatacaatgctacctcagtgcattagatcgctgctacactgtctatcgcaag
aaaatccatgctcagtggcagaaagagggagttgacaaagacttcaccctgaatgacttc
ggtttcatgatatttcactctccatactgcaaacttgtacagaaatctgtagctcgtctg
ttgctgaatgactttctgaatgatcagacacccacaaaagaaaatggcatctatagtggc
ctggaagcttttagagatgtaaaactagaagacacctactttgaccgtgatgtggaaaaa
gcttttatgaaggccagtgctgagattttcaatcagaaaaccaaagcttccttgcttgta
tccaatcagaatggaaatatgtacacgccttctgtctatggctgccttgcttctatccta
gcacagtattctcctcagcaactggcaggacagaggattggagtcttctcttacggctct
gggtttgctgctaccctctactccatcaaagttagccaagatgcaacccctggctcttct
ctggataaaataacagcaagcctctctgatctgaaggcaaggctcgattcaaggaaatgc
atctcgccagaggtgtttgcagaaaacatgatgcttagacaagatactcatcacttagcc
aactatattccacaatgttcagtggatgatctgtatgagggaacatggtacttggtgcga
gtggatgaaaaacacagaagaacctatgctcgtcgccccgtgctgggtgatgggcccttg
gaagcaggagtggaagttcatatgggccttgctcatgagcatatccctagccctgccaag
aaagtaccaagaattcctgcaaaaacagactcagaagccgttgctgtttccctttccaat
ggggagcattaa
DBGET
integrated database retrieval system
