Limnobaculum zhutongyuii: EKN56_00465 Help Entry EKN56_00465       CDS       T06157                                  Symbol ligB Name (GenBank) NAD-dependent DNA ligase LigB   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism prag  Limnobaculum zhutongyuii Pathway prag03030   DNA replication prag03410   Base excision repair prag03420   Nucleotide excision repair prag03430   Mismatch repair Brite KEGG Orthology (KO) [BR:prag00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     EKN56_00465 (ligB)    03410 Base excision repair     EKN56_00465 (ligB)    03420 Nucleotide excision repair     EKN56_00465 (ligB)    03430 Mismatch repair     EKN56_00465 (ligB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:prag03032]     EKN56_00465 (ligB)    03400 DNA repair and recombination proteins [BR:prag03400]     EKN56_00465 (ligB) Enzymes [BR:prag01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      EKN56_00465 (ligB) DNA replication proteins [BR:prag03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      EKN56_00465 (ligB) DNA repair and recombination proteins [BR:prag03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      EKN56_00465 (ligB)    NER (nucleotide excision repair)     GGR (global genome repair) factors      EKN56_00465 (ligB)    MMR (mismatch excision repair)     DNA ligase      EKN56_00465 (ligB)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       EKN56_00465 (ligB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB RNA_ligase HHH_5 Motif Other DBs NCBI-ProteinID:  QBH95021 UniProt:  A0A411WFE4 LinkDB All DBs Position 179682..181385 Genome browser AA seq 567 aa AA seqDB search MLFLIKLLIGWLLLYLSGGIAWGQTLTECPKWNKTQATREIRALDAELQRWNQAYYFQGV SLIDDDIYDHLLAQRRQWAGCFSDVVAEHNVFGEEGQNLPMFHPVVQTGLIKLADRQAVA DWMKSRSNLWIQPKIDGVAVTLVYQNGHLVSAISRGDGIKGQDWTAHALNINGIPRRIST DLPRVVVQGELFWYLADHIQHRDGGQNARAKVAGAMMAKALSPQAVTNIAFWVWDWPDGP EDMAFRLQQLKSMGFEYGPDDTHPVANVDEVESWYQYWFDNPLPFARDGVVIRQGIRPSG SSWSAQPPLWAAAWKYPTEKVIAEVQAINFNIGRTGRVSTVVQLEPVKIDDKTVRRISLG SIARWRSWDIVPGDRVAVTLAGQGIPKMTEVVWRVAERVVPEIPDETQHDSLSCWNTEGE CEQQFIARLVWLSGKKGLDLKGISQKTWQRLLIAGKVTDLASWLWLSEADLLSLSGFSQR NSQRMLQQIAIARQRDAAQWLTGLGMTFISPEIMRKVGWDNLLHWTATDWQQNGMGEKSA KRAVEFVHHPPLLALVEQLKAAGVQGF NT seq 1704 nt NT seq  +upstreamnt  +downstreamnt atgctttttcttatcaaactgttaattggctggttgctgctctatctgagtggaggtata gcctgggggcaaacgttaaccgagtgcccaaaatggaataagactcaggcaacacgcgaa atcagggcattagatgccgaattacagcgatggaatcaggcgtactattttcagggtgtt tcattgattgatgatgatatttatgaccatttgcttgcccaacgacggcagtgggctggc tgtttctccgatgttgttgcagagcacaatgtattcggtgaagagggtcaaaatctgcct atgtttcatcccgttgtacaaaccggactgataaagctggctgacaggcaggcagttgcg gactggatgaaatctcgctctaacctgtggatacagccaaaaattgatggcgtggcggtt acgctggtgtatcaaaacggtcatctggtgtctgcaatcagtcggggggatggtattaaa gggcaagactggaccgctcatgccctgaatattaacggtattccccgacgaattagtact gacttgccgcgagtcgtggtgcagggggagctgttctggtatctggcagaccatattcaa catcgtgatggtgggcagaatgccagagccaaagttgccggagccatgatggcaaaagcg ttgtcaccacaggcggtgacgaatattgctttctgggtctgggattggcctgatggcccg gaagatatggcatttcgtctgcaacagttaaaaagtatggggtttgagtatggtccagac gatacccatccagtggcaaatgtcgatgaagtagaaagctggtatcaatactggtttgat aatccattgccgtttgcccgtgatggtgtggttattcgtcaggggattcgcccatcaggt agcagttggagtgcgcaaccgcctctttgggctgctgcatggaagtacccgacagaaaag gtgattgccgaggtgcaggccatcaattttaacattggacgtactggtcgagtctcaacg gtagtacagctggaaccagtcaaaattgatgataaaacggtacgtcgaatatctttggga tcgatagcccgctggagatcatgggatattgttcccggcgatcgggtagcggtgaccttg gcggggcaagggattccaaaaatgacggaggtggtctggcgcgtcgctgaaagagttgtg ccagaaattccggatgagacacagcatgattctttaagctgttggaacacagaaggggaa tgtgagcagcagtttattgcccgactggtatggcttagcggcaagaaaggtttggatttg aaaggcataagccagaaaacctggcagcggttattgattgcaggaaaagtgacggattta gcatcctggctgtggttatcggaggctgacctgctgagcctatccggttttagtcagaga aattctcaacgaatgttgcagcaaattgccattgcccgtcagcgtgatgccgcccaatgg ttgacaggattggggatgacgtttatttctccggaaatcatgcggaaagtgggttgggat aatttacttcactggacagcaaccgactggcagcagaacgggatgggagaaaaaagtgcc aaacgggcggtagaatttgttcaccacccgccgctattagcgttagttgaacagcttaaa gcggcaggcgttcagggtttctaa

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