Limnobaculum zhutongyuii: EKN56_11475
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Entry
EKN56_11475 CDS
T06157
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
prag
Limnobaculum zhutongyuii
Pathway
prag01501
beta-Lactam resistance
prag01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
prag00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EKN56_11475
01503 Cationic antimicrobial peptide (CAMP) resistance
EKN56_11475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
prag03036
]
EKN56_11475
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prag02000
]
EKN56_11475
01504 Antimicrobial resistance genes [BR:
prag01504
]
EKN56_11475
Chromosome and associated proteins [BR:
prag03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
EKN56_11475
Transporters [BR:
prag02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
EKN56_11475
Antimicrobial resistance genes [BR:
prag01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EKN56_11475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
CusB_dom_1
HlyD_3
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
QBH96962
UniProt:
A0A411WLB0
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All DBs
Position
2563194..2564375
Genome browser
AA seq
393 aa
AA seq
DB search
MSRNRGVMPLAAVLMLSSGLVLVGCDNKSDAGAQHAAPEVEFVTVKTQPINITTELPGRT
SAFRIAEVRPQVSGIILKRQFTEGSMIKESDSLYQIDPATYQATYNSAVADLAKAEANAT
LTRLTVKRYQPLLKNNFVSRQDYDTAVANARQGEASVQAAKAAVETARINLEYTKVMSPI
SGLIGKSSVTEGALVNANQANALATVQQLDPIYVDVTQSSNDFLRMKQELADGSLKKESK
AAVSLIFDNGSVYKEQGTLEFEDVTVDETTGSITMRAVFPNPNNQLLPGMFVRARVDEGV
KPNAMLVPQQGITRNQRGEATTLVIDKEGKVESRIITTGQAIGADWLVTQGLEPGDRVIV
TGLQKIRPGASVNAKEYAEKSKDDASNAPAAKS
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgagtagaaacagaggggtgatgcctctggcagcggtgctaatgctttcaagcggttta
gtactcgtaggatgcgataataaatccgacgcgggcgcccaacacgcagctccagaagtt
gaatttgtaacggtaaaaacacaaccaatcaatatcactactgagcttcctggacgaaca
tctgctttccgtattgcagaagtgcgtcctcaggtaagcggaattatacttaaacgccag
tttactgaaggcagcatgatcaaagagagcgattctctttatcaaatcgatcctgcaacc
tatcaggcgacttataacagtgccgttgccgatctggctaaagcagaagctaacgctacc
ctgacgcgtttaacggtgaaacgttatcaaccactactgaaaaataactttgttagtcgt
caggactacgatactgccgtggctaatgcacgtcagggcgaagctagcgtacaggcagca
aaagcggctgtggaaactgcccgtatcaatctagaatacaccaaggtgatgtcccctatc
agcggtttgattggcaaatccagcgttaccgaaggtgcactggtgaatgcgaatcaggca
aatgctctggcaaccgtacaacagcttgatcctatctatgtagatgtcactcaatccagt
aatgatttcttgcgtatgaagcaagagctggctgatggctcactgaaaaaggaaagcaaa
gcagcggtaagtctgatttttgataacggtagcgtctataaggaacaaggcactctggag
tttgaagacgtcaccgttgatgaaaccacgggctctattactatgcgtgctgttttcccg
aatccaaacaatcagctactgccaggcatgttcgttcgtgcccgcgttgacgaaggggta
aaacctaatgcgatgctggttcctcagcagggaatcacccgtaaccaacgtggtgaagcc
acaacgctggttatcgataaagaaggtaaagttgaatcacgcattattactaccggtcag
gctattggtgctgattggctggtaacccaaggccttgagccgggcgatcgcgtgattgta
acgggcctacagaagatcagaccgggcgcatctgtcaatgctaaagagtatgcagaaaaa
tcgaaagatgacgcatcaaacgcaccagcagcgaaatcataa
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