Pieris rapae (cabbage white): 110991882
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Entry
110991882 CDS
T05162
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110991882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
prap03041
]
110991882
Spliceosome [BR:
prap03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
110991882
Complex C
U5 SnRNP specific factors
110991882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
Roc
MMR_HSR1
TniB
Ras
Motif
Other DBs
NCBI-GeneID:
110991882
NCBI-ProteinID:
XP_045487925
LinkDB
All DBs
Position
2:complement(9622364..9633162)
Genome browser
AA seq
976 aa
AA seq
DB search
MDGELYDEFGNYIGPDLESDSEDEQSVYGGDNREVDDEAMEEDEDADAEPEVAPMSVVLH
EDKRYYPQAIEVYGPDVETVVQEEDTQALDKPLIEPVKHKKFQLQEQQLPHTLYDMEYLA
DMLDNTNLMRNITLMGHLHNGKTSFVDCLMRQTHPDTINNDTTIPMRYTDTLFVEQERGV
SIKSMPVTLLLKDIKGKSHLLNIMDTPGHVNFSDEVTAALRISDGAILFVDAAEGIMLNT
ERLLRHAVQERVPLTICINKIDRLILELKLPPADAYYKLRHIIDELNSVCETTHSQDNPD
EPVTVFSPLLGNVCFASSLYDVCFTLESFAAMYANTHSTSGLRASDMAAWLWGDVYFNAK
TRRFSKKQPHSSAQRSFVEFILEPLYKIFAQVVGDVDSTLPDVLAELGIKLTKQESKLNV
RPLLRLVCSRFFGDFCGFVDMVTRHVPSPLDAAPRKVAHCYRGASGPLYDDMLNCDQSGR
LVAHTTKMYPTDDCTFFLVLARIMSGTLYAGQTVRVLGENYSTQDEEDSRMMNVGRLWIF
EARYKVELNRVPAGCWALIEGIDQPIVKTCTLVSADEEEELHTFKPLRFNTQAIVKIAVE
PVNPSELPKMLDGLRKVNKSYPVLSTRVEESGEHVILGTGELYLDCVMHDLRNMYSEIDI
KVADPVVSFCETVVETSSLKCFAETPNKRNKLTMIAEPLERGLAEDIEAGAVCVTWDRKR
LGEFFQTKYDWDLLAARSIWAFGPDSTGPNILVDDTLPSEVDKHLLASVKDSIVQGFQWG
TREGPLCEEPIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPYLF
VEVQAPADCVSAVYTVLAKRRGHVTQDAPVPGSPLYTIKAFVPAIDSFGFETDLRTHTQG
QAFCLQVFHHWQIVPGDPLDKSIIIRPLEPQPATHLAREFMIKTRRRKGLSEDVSINKFF
DDPMLLELARQDVQFN
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atggatggtgaactgtacgatgagttcggcaactatatcggcccggacttagaatctgac
tcagaagacgagcagagtgtatatgggggtgataatcgtgaggtagatgatgaggctatg
gaagaagacgaggatgctgatgcagagcctgaagtggcacctatgtccgtcgttcttcat
gaggacaaacgctactatccacaagccattgaagtatatggtccagatgttgaaacagtt
gttcaagaagaagacacccaagccctggataagccactgattgagccagttaagcataaa
aagtttcaactccaagagcaacagttgccacatactttatatgatatggagtatttggct
gatatgcttgataatacaaatttaatgagaaatattaccctgatgggacatttacataat
gggaaaacatcatttgttgactgtttaatgcgtcaaacacaccctgacacaattaataat
gatacaaccataccaatgagatatacagacactctgtttgtcgagcaagaaagaggggtg
tccattaaatcaatgcctgtgacactccttttaaaggacataaaaggaaaatcccatttg
ctgaatatcatggataccccaggacatgttaattttagtgacgaagtaactgctgcttta
agaatttctgatggtgccattctatttgttgatgctgctgaaggcataatgctaaatact
gaacgattgctacgtcacgccgtacaagaacgtgttccacttacaatttgtatcaacaaa
attgacagattgattttggaactcaaacttcccccagcagatgcatattataaattgaga
catattattgacgagttgaattcagtttgtgaaaccactcactcgcaagataatcccgat
gaacctgtgactgtcttttcgccattgttgggaaacgtctgctttgcatcttcactctac
gatgtctgttttacattggagtcgtttgccgcaatgtatgctaatactcatagtacaagt
ggcctcagagcttcagatatggcagcttggctatggggagatgtttactttaatgccaaa
acaaggcggtttagcaagaaacaaccacactcttctgcacagaggagttttgtggaattc
attttggagccactgtataagatattcgcacaggtggtaggagatgtagacagcacgcta
ccggatgtattagcggagttgggtatcaaattgacaaagcaggagtctaaattaaatgtg
cgtccattattgcgactcgtatgcagtcggttttttggtgatttttgtggcttcgtggat
atggtgacccgtcatgtcccgtccccattggacgctgccccacgtaaagtggcacattgc
tatcgtggtgcttctggtccattatacgacgacatgctgaattgtgatcagtcaggtcga
ctcgttgcacatacgactaagatgtatccgactgatgattgtacattctttttggtactt
gccagaataatgtctggcacgttatacgcggggcagacggttcgtgtgttaggtgaaaac
tacagtacacaagatgaagaagattctaggatgatgaacgttggacggctttggattttt
gaagccagatataaagtagaattaaacagagtaccagcaggatgctgggcgctcatcgaa
ggtatcgaccagcccatagtgaagacgtgtacccttgtctcagctgacgaggaggaggaa
cttcataccttcaaacccttgaggttcaacactcaagccattgttaaaatagccgtggaa
cctgtcaacccttcggagctgccgaagatgcttgatggattgagaaaagtgaacaaatct
tacccagtgctttcaacaagagtggaagagagcggtgaacatgttatactgggaaccggt
gaactatatctggactgtgttatgcatgatcttaggaatatgtactcggagattgacatt
aaagtggctgatccggtggtatcattttgtgagacggtagtggaaacatcttccctcaaa
tgtttcgcggagacaccgaataagagaaacaaactgacaatgatagctgaacccttggaa
cgaggattagctgaagatatcgaggctggagctgtttgtgtcacgtgggacaggaagaga
ttgggagagttcttccagaccaaatacgactgggatttgctagccgctcgttcaatttgg
gcgttcggaccagattccacgggtccaaatatattggtcgatgatacgctaccatcagag
gttgacaaacatttgctggcctccgtcaaggatagcattgttcaaggttttcaatggggt
accagggaaggtccattatgtgaagagccaatacggaatgtgaaatttaaaattctggat
gcggtgatcgcccaagagcccttacatcgtggtggaggacagataatacctacagctaga
cgggtggcatattcggctttcttaatggcaacaccgcgtttgatggagccctatttgttt
gtggaagtgcaagcaccagctgattgtgtgtcggcggtttacacagtactggctaaacga
agaggacatgtaactcaagatgcaccagtgcctggttctcctttatatacaatcaaggca
tttgtgccagccatagattcgttcggatttgagacagatttacgtactcacacgcaggga
caggccttctgcctgcaagtttttcatcactggcagattgtgcctggagatccattggac
aagagtataattatacgacccttggagccccagccagccactcacttggctcgtgaattc
atgataaagacaaggagacgtaaggggcttagtgaagatgtctccattaacaagttcttc
gacgatcctatgttgctggaactggctcgacaagatgttcagtttaattaa
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