Pieris rapae (cabbage white): 110995488
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Entry
110995488 CDS
T05162
Name
(RefSeq) uncharacterized protein LOC110995488
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03440
Homologous recombination
prap03460
Fanconi anemia pathway
prap04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110995488
09124 Replication and repair
03440 Homologous recombination
110995488
03460 Fanconi anemia pathway
110995488
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
prap01009
]
110995488
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
prap04121
]
110995488
03036 Chromosome and associated proteins [BR:
prap03036
]
110995488
03400 DNA repair and recombination proteins [BR:
prap03400
]
110995488
Enzymes [BR:
prap01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110995488
Protein phosphatases and associated proteins [BR:
prap01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110995488
Ubiquitin system [BR:
prap04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110995488
Multi subunit type E3
BRCC complex
110995488
Chromosome and associated proteins [BR:
prap03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
110995488
DNA repair and recombination proteins [BR:
prap03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
110995488
BRCA1-A complex
110995488
BRCA1-B complex
110995488
BRCA1-C complex
110995488
BRCA complex
110995488
FA (Fanconi anemia) pathway
Downstream FA components
110995488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT_2
BRCT
RTT107_BRCT_5
zf-C3HC4_3
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
110995488
NCBI-ProteinID:
XP_022118359
LinkDB
All DBs
Position
20:4034820..4042020
Genome browser
AA seq
1103 aa
AA seq
DB search
MDSDRTMNIVLKEKYSNLFSKIIETNVYYVTCLECCKYYVVPTTASCGHSLCHTCWYGRQ
TCPNCRIKIDRKSLKLNMVLQNLTEHIHNLQDASKDIFGPTTDYISSMDSGLLHDPTKNV
NEWLTSSQNHFSAPVTTPESIPDLTIPSKILNKDIHLIENKTTTKAVLIDQMDWDKIEEL
PESEDISNKNKENIVGPMDIEQLDIIDGFEEYSTDNPRRSSRNKDIFISNEKNTGGSSPK
TIKNKNTNNWITVKNMRQEFSKLNKKAKNKLNVSVEIAKTIQDKKNIVPLENSSKTSEVD
IISFTENENIIKNTVHVHSENIVNNNQSDKYKTENRKESCKATTDFSQNLSPLEPLKINN
QSFLSKTIKEKDKSSNSLGKNHSKNNVPFFKRCPWSSKIGLQVEDNEQNEISEAVKTDDI
EITIKVGKTVANICIKKKENNVNVKVNSELEIQSSISKNNAYETNISTSPFKKNAQEKRK
TELVNKSIQAFVEIDSVKKINTASADTSSLNTVKKTIEKQLSSINETEEIKNTNNSCPEM
NQPKLNKNPKDCLNDFDMFDSEPVKDCNIQPLSGSVQTPSAIFMPSNVSKLNTQTKSSKR
ERDECETVVPNKKGKITPTMSRKRNLITLNESEPGDYNEILDQVYANIKEDMKGGNSTYS
ANYISNMQMIQITSSQQSNKFENNNTIKDKPTQKCSENIFSLIEHKLDLKNSQDKHKSTD
IKKTKSNEIADKINTQLQSPDYDMDIIPSTPQNDDSDKSVVEETPQKDISHKSKQIDSIK
SRQKSKTHESVATIDVTESTKEAIVEKNQSIETPASMYKFVNNLHNKSTPIAKKSLDFTY
PEQMCPINTQEREIISKAFDQVQPENIIKKYCLVVSCLTPPDVARVKLLCKREKWTFVDK
FTPDVTHLIVSVTNDNRAQRSVKFICALAASKWILSMEWIHKCINSKQVVNEEPHEVLDM
TSEPGPRRSRLARQKLFDGIKFYCMPPFGVLDIETLKEILVCAGGEVVNEIKDVKATEAP
SILLAEPESTQENRFIDIAVNLSVVPVNYEWVLNSLGCYTLATIVDLLLCPESLLPQVIM
KWPRALISSNDSNDDIFCNRNIM
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atggattctgatcgcacaatgaatattgtactaaaggaaaaatattcaaatttattttcc
aaaatcatagagacaaacgtgtattatgttacttgtttggaatgctgtaaatattacgta
gttccaactacagcttcctgcggccactctttgtgtcacacatgttggtatggaaggcaa
acatgtccaaattgtagaattaaaatagatcgtaagtctttaaaactgaacatggttcta
caaaatttgactgaacatatacacaacttacaggatgcctctaaagacatatttggccca
acaactgattatatatcaagtatggacagtggacttctacatgatcccacaaaaaatgta
aatgaatggttaactagttcacagaaccacttttctgcacctgttacaacaccggaatct
attccagacttgactataccttctaaaattttaaataaagatattcatctcatagagaat
aaaacaactactaaagctgtattgatagatcaaatggattgggacaaaattgaagagctt
cctgagtcagaagacatatcaaataaaaataaagagaacatagttggtcctatggacatt
gagcaattggacataattgatgggtttgaagaatattcaacagacaatcctcgtagaagt
tccagaaataaagatatatttataagtaatgaaaaaaatacaggtggctcttcacctaaa
actattaaaaataaaaacactaataattggataactgttaaaaacatgaggcaagagttt
agtaaattaaataaaaaagctaaaaacaaattaaatgtttcagttgaaatagctaaaaca
attcaagacaaaaaaaatatagtgccactagaaaacagtagtaaaaccagtgaagttgat
ataatatcatttacagaaaatgagaatatcattaaaaatactgttcatgtacattctgaa
aacattgttaataataaccagtctgataaatataaaacagaaaatagaaaagagagttgt
aaagcaactacagattttagtcagaatttgagtccactggaaccattaaaaattaataat
caatctttcttaagtaaaaccataaaagaaaaagataaatcatcaaattctctgggtaaa
aaccatagtaaaaacaatgtaccttttttcaaaagatgtccatggagtagcaaaataggt
ttacaagttgaagataatgagcagaacgagattagtgaagcagtgaaaactgatgatatt
gagataacaatcaaagttggaaaaactgtagccaatatttgtattaagaagaaagaaaat
aatgttaatgtcaaagtaaattctgagcttgaaattcaatcatctatttcaaaaaataat
gcttatgaaaccaatatttctacttcaccttttaaaaaaaatgcacaagaaaaaaggaaa
actgagcttgttaacaaatccatacaagcttttgttgaaattgactcagtaaaaaaaata
aatacagcctctgctgatacctcaagcttaaatactgttaagaaaacaattgaaaaacaa
ttaagttccataaatgaaactgaagaaataaaaaacactaataattcttgtccagaaatg
aatcagcctaaattaaataagaatccgaaagactgtttgaatgattttgatatgtttgac
agtgaaccagttaaggattgtaatatacaaccactttcaggatcggtacaaactccctca
gcaatttttatgccatccaatgtgtccaaacttaacacccaaacaaaaagtagtaagaga
gaacgcgatgagtgtgaaactgttgtaccaaacaaaaaaggtaaaattactccaacaatg
agtagaaaaagaaacttgataacactcaatgaaagtgaacctggtgactataatgagata
ttagatcaagtatatgctaatataaaggaggatatgaaaggtggcaactctacatatagt
gcaaattatatttcgaatatgcaaatgattcaaataaccagttcccagcaatcaaataaa
tttgaaaacaataacaccattaaagataagccgacacaaaagtgcagtgaaaatattttt
tccttaattgaacataaattggacttaaaaaattcacaagacaagcataaatctactgat
attaaaaaaacaaaatcaaatgaaatagctgacaaaattaacacacagttacaaagccca
gactatgatatggatattattcctagtacgccacaaaatgatgattctgataagagtgtt
gttgaagagactccgcaaaaagacatatctcacaaatccaaacagatagattcaatcaaa
tcaaggcagaagtcaaaaacacatgaatctgtggctaccatagatgtaacagagagcaca
aaagaagctatagtcgaaaaaaatcagtccatcgaaacacccgcgtctatgtacaaattt
gtgaataatttgcataataaatccacacctatagcgaagaagtcccttgatttcacttac
ccagaacaaatgtgccctatcaatacacaagaaagagaaattataagtaaagcttttgat
caagttcagccagagaatataataaaaaagtattgtctggtcgtttcgtgtttgaccccg
ccagatgtcgctagggtgaaattgctttgcaagcgagagaaatggacgtttgttgataag
ttcacaccggatgtgacgcacttgattgttagtgttacgaatgataatagggctcagcga
tcggtaaaatttatttgcgctctggcagcgtctaaatggatactttcaatggaatggatt
cataaatgtattaatagcaaacaagtcgttaatgaggaacctcacgaagttttggatatg
acgagcgagccaggtccgcgcaggtcgcgactcgcacgccagaagttgttcgacggaatc
aagttctactgcatgccaccattcggagtgctagatatcgaaacacttaaggagatattg
gtgtgcgctggtggcgaagtggtgaatgagattaaagatgtaaaggcaactgaggcacct
tcgatactcttggcagagcctgaaagcacacaagagaatagatttatagacatagcggtg
aatctaagcgtcgtgccagttaactacgagtgggtcctcaatagtctgggttgttacaca
ttagccactatcgttgacctcctcctgtgtccagaatcgttactcccgcaggtcataatg
aagtggccgcgcgcgcttatatcatcgaatgattcgaatgatgacattttttgcaataga
aatataatgtaa
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integrated database retrieval system
