Pieris rapae (cabbage white): 110995650
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Entry
110995650 CDS
T05162
Name
(RefSeq) fringe glycosyltransferase
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap00514
Other types of O-glycan biosynthesis
prap04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
110995650
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
110995650
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
prap01003
]
110995650
Enzymes [BR:
prap01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
110995650
Glycosyltransferases [BR:
prap01003
]
Glycan extension
O-Glycan
110995650
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Pyrid_ox_like
DUF604
Motif
Other DBs
NCBI-GeneID:
110995650
NCBI-ProteinID:
XP_022118601
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All DBs
Position
8:2747535..2768354
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AA seq
326 aa
AA seq
DB search
MGGRRLIKAAAVLIVLGYSSLLVYQSGVNFNFQDNRASVQVAVLSIEPVTKTTLYDSELS
NNITLSDVFISVKTTKHYQYTRLPIILKTWFQLAKEQIWFFTDTDNRQHQNQTNGHMVNT
NCSASHQRKHLCCKMSVEYDRFLESGKKWFCHFDDDNYVNVPRLVSVLQTYNHKEDWYLG
RTSVYEPVKIFKKPTNKLMFSFWFATGGAGFCISRSLALKMLPVASGGRFISICEGIRLP
DDVSVGFIIEHLMKKNLTLVPEFHSHLEQMKLLPPETFREQISFSYSKIKEEWNVVNVPG
FDTRYDPTRFLSLHCFLFPHFKFCPR
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgggtggacgcaggctgattaaggctgcggctgtgctcattgttttgggttacagcagt
ttgcttgtttatcaaagcggagtgaactttaattttcaagacaatcgagcatctgtgcaa
gtcgctgtcctatcaattgaacctgttacaaagaccactttgtatgatagtgaactgagt
aataatattactttaagtgatgtatttattagtgtaaagactacaaaacattatcagtat
acaagactgccaattattcttaagacgtggttccagttggctaaagaacagatatggttc
ttcacagacacagacaatcgacaacaccaaaatcaaacaaacggccacatggtaaacacc
aattgctcggcgtcacatcagcgaaaacacctttgctgcaaaatgtccgtggaatatgac
cgttttctggagagcggtaaaaagtggttttgtcatttcgacgacgacaattatgtgaat
gtgccacgacttgtcagcgtactccagacttataaccacaaagaggactggtatctgggt
agaacctccgtttacgaaccagttaagatatttaagaaaccaaccaataagctaatgttc
tcgttttggtttgccaccggaggtgctggattttgtatcagccggagcttagcattgaag
atgttacctgtagcaagtggtggaagatttatcagcatctgcgaaggaatcagattgcct
gatgatgtatcagtgggctttattatagagcatctgatgaagaaaaaccttactctagta
ccagagtttcattcacacctggaacagatgaagctattgccacctgagacctttagagaa
cagatctcttttagttattcgaagattaaagaagaatggaacgtcgtcaatgttcctgga
tttgacactagatatgatccaactaggttcctgtctctacactgttttctttttccccat
ttcaagttttgcccgaggtag
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