Pieris rapae (cabbage white): 110999197
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Entry
110999197 CDS
T05162
Name
(RefSeq) sodium-dependent noradrenaline transporter
KO
K05035
solute carrier family 6 (neurotransmitter transporter, noradrenalin) member 2
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
110999197
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prap02000
]
110999197
Transporters [BR:
prap02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
110999197
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
110999197
NCBI-ProteinID:
XP_022123829
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Position
5:697589..715873
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AA seq
745 aa
AA seq
DB search
MAGMPVLGNSVGAGELRENGSNRSSSSESHMDTSPHRTQDPDISSLRPDLTTSTPLPLRR
PYEPNYKATVPTVATLNSGIVVTHTVPSYDEQRASPALLTRHSGTPGGRSVRDDGYSSAG
STPRALDHKSTKGSVVTLSCYKKEPKIEIAEEGYFTEPSKRNRKHSIKVNLTEKPDDDRE
TWGTGADFLLSIIGFAVDLANVWRFPYLCYRNGGGAFLIPYTLMLIFGAVPLFYMELILG
QYNRQGPITLWKICPLFKGVGFCAVMVAFYVSFYYNVIIGWALYFLVSSARSELPWLHCN
NLWNTDQCWDASRQNTTNKTDISYQGPLSHFTPASEFFHRAVLEMQYSEGLNDLGFPKWQ
LTICLGIVYITLYLSLFKGVKSSGKVVWMTATMPYVVLSILLARGLLLPGATRGIAYYLH
PELSRLKDTQVWVDAAVQIFYSVGAGFGVHLSYASYNTFHNNCYRDCLVTTLVNCFTSFF
SGFVIFTYLGFMSHKQGVPISSVATEGPGLVFQVYPEAVATLPGASLWAMLFFFMLIMLG
LDSGMGGLECVITGLLDAARASGARWLRREHFTLLVVCLSFCIACINVTPGGIYMFHLLD
TYAAGISLLCSALFEAVAVSWFYGLKRFSDDVEEMLGFRPGLYWRICWKFISPIFIIGVV
VFGLLYQQPLQYQNYMYPQWAVVLGWGLACSSILMIPIVAIYKLISTPGNCRQRIACCIS
PISEHEAIRSGAPVTRFTWSHWLYV
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcatgccagtgctgggtaatagtgtaggagccggcgagttgagagaaaatgga
agtaaccgttcttcgagtagcgaatcgcatatggacacgtcgcctcacagaacacaagat
ccggatataagttccctgagaccagacttgacgacttccactccacttccactccgtcgt
ccatatgagcccaactacaaagctacggtgcctactgtcgcaacactaaacagtggtata
gtggtgacgcatactgttccgtcgtatgatgagcaacgcgccagtccagcactacttacg
cgtcattcgggtactccaggtggcagaagtgtgagagacgatggctattcttcagctgga
agtacgccgcgagcacttgatcacaaatcaaccaaaggctctgtggttacattgtcttgt
tataaaaaagagccgaaaattgaaatcgctgaagagggctacttcacagaaccgtcaaaa
cggaataggaaacatagcatcaaagtcaatttgactgagaagcctgacgatgaccgggag
acgtggggcactggagctgacttcctcctctccatcattggcttcgcagtggatttggct
aatgtttggcgttttccatacctctgctatcggaatggcggaggtgcattcctgatacca
tacacattgatgctgatcttcggagcagtacctctattctacatggaactgattttgggc
caatacaatcgacagggccctataactctatggaaaatttgtccacttttcaaaggtgtg
ggattttgcgcagttatggtggcgttttacgtttctttctattacaacgttattatcggg
tgggcactctacttcctcgtatcatcagctcgttcagaacttccctggctacattgtaac
aacttgtggaatactgatcaatgctgggatgcctcaagacaaaatacaaccaacaagacg
gacatttcataccagggccctttgtcacatttcacaccagcatctgagttctttcatcgt
gcggtacttgaaatgcaatattcggaaggattgaatgacttgggtttcccaaaatggcag
ctcactatttgcttgggaatcgtttacataacgttgtacctatcgctgttcaaaggagtt
aagagttccggtaaagtggtgtggatgactgcaacgatgccgtacgtggtattatcaatt
ttgcttgctcgtggattactcctgcctggagcgacacgtggaattgcttactatttgcac
ccagaactgtcgaggttaaaggatacacaggtttgggtggacgcggctgtacaaatattt
tattcggtgggtgccggttttggagttcatctctcttacgcgagttacaatacctttcat
aataactgttatagggattgtctggtaacgactctagtgaactgcttcacgtctttcttc
tccggtttcgtcatcttcacttacctgggttttatgtcacacaaacaaggagttcctata
tcgtctgttgctactgaaggtccaggcctcgttttccaagtgtacccagaagcggtggcc
acgctgcccggagcaagtttatgggctatgctgttcttctttatgcttattatgcttggc
ttggattctgggatgggcggtctcgagtgcgtgatcacaggcctcttagacgcggcaaga
gcaagtggtgcgcgatggctacgtcgtgaacacttcacactgttggttgtgtgtctgtct
ttttgtattgcctgtataaatgttacaccgggaggaatctatatgttccatttactagac
acctacgcagcgggaatttctcttctttgctcggcgctctttgaagcagtggcagtctcc
tggttctatggattgaagagattctccgatgacgtggaagaaatgcttggtttccggccc
gggttatactggcgaatatgctggaagtttatcagtcccatatttattattggcgtggta
gtctttggactgctgtatcaacagccattgcagtaccagaattacatgtatccccagtgg
gccgtggtgctgggctgggggctggcctgctcctcaattctgatgatacccattgtggct
atatacaaactgatttcaacacctggaaattgtcgacagcgtatagcttgttgcatctca
ccaatatcagaacacgaagctattcgaagtggagcaccagtgactagatttacttggagc
cattggctttacgtttaa
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