Pieris rapae (cabbage white): 111001017
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Entry
111001017 CDS
T05162
Name
(RefSeq) geranylgeranyl pyrophosphate synthase-like
KO
K00804
geranylgeranyl diphosphate synthase, type III [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap00900
Terpenoid backbone biosynthesis
prap01100
Metabolic pathways
Module
prap_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
111001017
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
prap01006
]
111001017
Enzymes [BR:
prap01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
111001017
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
111001017
2.5.1.29 geranylgeranyl diphosphate synthase
111001017
Prenyltransferases [BR:
prap01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
111001017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
SNaCT11
Paramyx_P_V_C
Motif
Other DBs
NCBI-GeneID:
111001017
NCBI-ProteinID:
XP_022126374
LinkDB
All DBs
Position
5:complement(3660747..3667046)
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AA seq
300 aa
AA seq
DB search
MSGEDNVPDLEEEMLLPYFHVIKVESKGIRNRIAEAFNHWLKIPNEKMKEIIDIMAMCHN
GTLILDDIQDDIDVRRGIPSAHCVYGVPMASNSAIHVIVLAMHRCSKLGLEALTVFNEEA
LEIVRGQGKEIYWRDTFVCPTEAEYKKMTEQKTGGMLNIAVRLMQIFSENTNNYTDLGKK
LGYYFQLIDDYCNIGEPEKLEERPSDKVLPDYYMDLTEGKFTIPIIHALRTGKREAVLSI
LKQRPTNLDLKRYFVSLLEDLGSLEYTRKIIRDLEAHLRSEIRRLGGNPLMDAVLDQYSV
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtctggagaagataacgttcctgatttggaagaggaaatgctcctaccctacttccat
gtaataaaagtggagagtaaaggaataagaaaccgaatagcagaggcctttaaccattgg
ctcaagattcctaatgagaagatgaaagagattattgatatcatggccatgtgccataat
ggtacacttattttagacgacatacaagatgacatagatgttaggcgtggaattccctca
gcccattgcgtttatggagtacccatggcttcgaattctgccattcatgtcattgtcctg
gctatgcacaggtgctctaagttgggtctagaggcactaacagtgtttaatgaagaagca
ctcgaaatagtgaggggtcaaggtaaagaaatctattggagagacacgttcgtctgcccc
acagaagctgagtataagaagatgacagaacaaaaaacaggaggaatgctgaacatagct
gtgagactgatgcagatcttcagtgagaatactaataattatacggatttagggaagaag
ctcggatactactttcaattaattgatgattactgcaatattggagaacctgagaagtta
gaggaacgtccttctgataaggtgttgccagattattatatggatttgacagaaggaaag
tttacaatacctatcatacacgcactgagaaccggtaaaagagaggctgttttaagtata
cttaagcagagaccaactaatttagacttaaaacgttacttcgtgtctcttttggaggat
ctcggcagtttggagtacacaagaaagattattcgggacttggaagcccatttgcggagt
gaaattcgtcgtctcggtggtaacccacttatggatgcagtgctggaccaatatagtgtt
taa
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