KEGG   Pieris rapae (cabbage white): 111002362
Entry
111002362         CDS       T05162                                 
Name
(RefSeq) jmjC domain-containing histone demethylation protein 1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
prap  Pieris rapae (cabbage white)
Pathway
prap03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:prap00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    111002362
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:prap03000]
    111002362
   04121 Ubiquitin system [BR:prap04121]
    111002362
   03036 Chromosome and associated proteins [BR:prap03036]
    111002362
Enzymes [BR:prap01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     111002362
Transcription factors [BR:prap03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    111002362
Ubiquitin system [BR:prap04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     111002362
Chromosome and associated proteins [BR:prap03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    111002362
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     111002362
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like JmjC LRR_4 Cupin_8 F-box JHD LRR_At5g56370 LRR_FBXL18 PHD Rubredoxin JmjC_2 Nucleo_P87
Other DBs
NCBI-GeneID: 111002362
NCBI-ProteinID: XP_022128242
LinkDB
Position
14:2722118..2742464
AA seq 1009 aa
MSETLPNNKKQVPRQLRERKQRKLYSDEWALGDDEAEGGRGFSLADKLDSSRFEHSGDVL
DMQGSDLTITYLQKHGFTTPLLFKDKAGLGLRVPTSNFTVNDVRMCVGSRRLLDVMDVNT
QKNIEMTMKDWQRYYDDPNKERLLNVISLEFSHTRLENYVQAPRIVRLIDWVETVWPRHL
KDQQTESTNALDDMMYPKVQKYCLMSVKGCYTDFHIDFGGTSVWYHILRGAKVFWLIPPT
ERNLQLYEKWVLSGKQSDVFFGDTVEKCIRVHLQAGHTFFIPTGWIHAVYTPSDSLVFGG
NFLHQFGIEKQLKIAQVEDVTKVPQKFRYPFFTEMLWYVLDRYVCALLGRSHLAPEGQNP
PPTAPKDHIHLTQNELHGLKEIVLYLHQLPAARKSVPELLSDPIALVRDVRTLVEQHRHD
KQQLAITGQPILKGPDDAGGERIRQWGGGRGRGGHRGGPARPRPEHANNAPRRRRTRCKK
CEACQRTDCGECVFCHDMVKFGGMGRAKQTCVMRQCLQPMLPVTASCAVCHLDGWMQTPV
APQAKGNSGRNGPSLLRECSVCYSIVHETCVPAGGQLNEDLPNSWECPTCTTMGLNHDYK
PRHFRARQKSSDLRRMSVSSDASQLSQNLQNKLPPPSSMSVKTEATSDAENKGDTPVKTE
MDVKQDDEVKEAGDSADRGEDWEPNSKRRRASDEDEAPKKQALRAHLALQLTHHSAKNLK
KPLYPVRPAPTSGSNMAGTPWLDRDAMLSVFAKLTPHELATCALVCKSWAEYSMDPCLWR
SMSFVQVRVSAAQLAGIARRQPLSLGLEWCHLARRQLAWLLARLPALRSLSLAGSPAEAA
LALRSSSCPPLTSLDLSFARCLDDAKLRGILAPPENSRPGGGARSGTEPSRLAALAVLRL
PGTDITDVAMRYVVQALPKLVELDASSCARLTDAGAAQLAHHGLRRLSLAGCRLLTEAAL
DHLTRCPNLERLDLRHVPLVSTQAVIKFAAKSKHDLHVKDVKLVELRAT
NT seq 3030 nt   +upstreamnt  +downstreamnt
atgtcggaaacactgccgaataataaaaagcaagttccacggcagctgcgtgaacgcaag
cagcgaaaactttattctgatgagtgggcccttggtgatgatgaagctgagggtggccgg
ggattctccctggctgataagctggatagttcaagatttgaacattccggggatgttttg
gatatgcagggctctgatctaaccataacatatctccaaaagcatggattcacaactccg
cttctgttcaaagataaagcaggattaggcctaagagtgccgaccagcaattttacagtg
aacgatgtgcgcatgtgcgttggatcgcgacgccttctcgacgttatggatgtaaataca
cagaagaacatcgaaatgactatgaaggactggcaacgctactatgacgacccaaacaaa
gagcgtcttttgaatgtgatttccctagagttttctcacacgcgtctcgagaactatgta
caggctccccgtatcgtacgtcttattgactgggtcgagactgtatggccgagacatttg
aaggaccaacagacggagtcaactaacgccctggacgacatgatgtatcccaaagttcaa
aagtactgtctgatgtctgtgaagggctgttacacagacttccacattgactttggtgga
acatctgtctggtatcatatactgcgaggggcaaaagtattctggctaattccaccgaca
gagcgtaaccttcaattgtatgagaagtgggtgttgtctggaaaacaatctgatgtcttc
ttcggtgacacagttgaaaagtgtatacgggttcatcttcaagcgggacatacattcttc
ataccaactggttggatacacgctgtatatacgccaagcgactctctggtctttgggggt
aacttcctccatcagtttggtattgaaaaacaacttaagatcgcccaagttgaagatgtt
accaaggtgccacaaaagttccgttatccattctttacggaaatgctgtggtatgtgtta
gatcgctatgtgtgtgcgttactcggtcggtctcatcttgctcctgagggtcaaaaccca
cctccaacggctcctaaggatcatatacatcttactcaaaatgagctgcacggattgaag
gaaatagtgctgtatctgcatcaattgcctgcagcacgtaaatcagtccccgaattactc
agcgatcccatagcattagttcgggatgtgcgtaccttggtggaacaacatcgtcatgat
aaacaacaacttgcgattactggacagcccatattgaaaggcccagatgacgctggcggt
gaaaggatccgccaatggggtggcggtagagggcgtggtgggcatcgcggtggtcccgct
agaccacgtcccgaacatgccaataacgcacctaggcgacgcagaaccagatgtaagaaa
tgtgaagcctgtcagcgtacagactgcggagaatgtgtgttctgtcatgatatggtcaaa
tttggagggatgggacgggctaaacagacttgtgttatgaggcagtgcttacagccaatg
ttgcctgtcacagcatcttgtgcagtttgtcatttggatggatggatgcaaactccggtt
gcaccacaggctaaagggaactctggtcgcaacggtccatcattacttcgtgaatgctca
gtatgctacagcatagtacatgaaacctgtgtaccagctggaggtcagttaaatgaagac
ttgcctaactcctgggagtgtcccacttgtactactatgggacttaaccatgactacaag
ccgcgccatttccgtgcccgtcagaagtcttccgatcttcgtcgtatgagtgttagctct
gacgccagccaactcagtcagaatttacaaaataaattacctcctccatcatcaatgtcg
gtgaagactgaagccacttctgatgctgagaataagggtgatacgccagttaaaactgaa
atggacgtgaaacaagacgatgaagtcaaagaagcaggcgatagtgctgataggggtgag
gactgggagccaaacagcaagaggcgacgagccagtgatgaagatgaggcaccgaagaaa
caggctttgagggcgcatttggctttgcagcttactcaccactcggctaagaatctaaaa
aaaccattatatccggttcgcccagctccgacgtccggatcaaatatggctggcactcct
tggctggatcgagacgcgatgttgagtgtctttgcaaaactcaccccgcatgagttagcc
acttgtgcgcttgtatgcaagtcttgggcagaatattccatggacccgtgtctatggcgc
agcatgtcgttcgtacaagtgcgtgtatcggccgctcagttagcaggcattgcccgacga
cagcccttatctttaggccttgagtggtgtcatttggcacgacgacaacttgcctggtta
ttggcaaggcttccagcccttcgatcattatctcttgctggttctcctgccgaggcagcc
ctggcgcttcgatcaagctcgtgtccaccattaacatcactggatctgtctttcgctcgt
tgcctggacgacgcgaaactccggggtattttagccccaccggagaactcgcgcccaggt
ggtggtgcccgttcggggactgagccgtctcgtttagcagcacttgccgtcttgcggctc
ccgggaactgatatcactgatgttgctatgcgatatgttgttcaggctttaccaaagcta
gtagaactcgatgcgtcgtcctgcgcacgtttgacagacgcgggcgcagcacagttggca
catcacggccttcgtcgattgtctctggctggatgtcgattgttgaccgaggctgcattg
gaccatcttactcgatgccctaatcttgagcgattggacctgcgacacgtgccactggtc
tcaacacaggctgtgatcaaattcgcagccaaatccaagcatgacttgcacgttaaggac
gttaaactggtcgagttgagggccacctga

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