Plasmodium reichenowi: PRSY57_0819200
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Entry
PRSY57_0819200 CDS
T08079
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3, putative
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
prei
Plasmodium reichenowi
Pathway
prei03018
RNA degradation
prei03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
prei00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PRSY57_0819200
09123 Folding, sorting and degradation
03018 RNA degradation
PRSY57_0819200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prei03019
]
PRSY57_0819200
03041 Spliceosome [BR:
prei03041
]
PRSY57_0819200
Messenger RNA biogenesis [BR:
prei03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PRSY57_0819200
mRNA degradation factors
5'-3' decay
Lsm complex
PRSY57_0819200
Spliceosome [BR:
prei03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
PRSY57_0819200
Complex C
U2 snRNP components
PRSY57_0819200
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
CCDC146_C
BioT2
Myosin_TH1
Motif
Other DBs
NCBI-GeneID:
24530734
NCBI-ProteinID:
XP_012762585
UniProt:
A0A060RWV1
LinkDB
All DBs
Position
8:complement(<699262..>699930)
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AA seq
91 aa
AA seq
DB search
MEKIALIQNPLDYIRLNMEEEIILKCKGDRELIGKLDAYDNHLNMILSNVRETYKYSVKE
NDEETVKKMERNLDMVFVRGDSIILVSSAMK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaatagcattaatacaaaatcccttagattatattcgtttaaatatggaagaa
gaaataattttaaaatgtaaaggagatagagaactcattggaaaattagatgcttatgat
aatcacttaaatatgattttatccaatgtacgtgagacttataaatatagtgttaaagaa
aatgatgaagaaacagtcaagaaaatggaaagaaatttagacatggtttttgttagagga
gattctatcatcctagtatcatctgctatgaaataa
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