Poecilia reticulata (guppy): 103464707
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Entry
103464707 CDS
T05149
Name
(RefSeq) plakophilin-1-like
KO
K10387
plakophilin 1
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pret04812
]
103464707
Cytoskeleton proteins [BR:
pret04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
103464707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
Atx10homo_assoc
HEAT_EZ
HEAT
Motif
Other DBs
NCBI-GeneID:
103464707
NCBI-ProteinID:
XP_008407197
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Position
LG5:11313746..11324590
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AA seq
733 aa
AA seq
DB search
MSGADPLKSAISIRGADDTSLALPSANEYHSREQRVRAQVQSLRRTKSRHSSSGRSESSC
LSPSSPEYDSVFLDGAKSSQLSSSNGSVFLSNGSSKVFTTNRNMNNQHMIGNMKRANMRK
QTMNHYESRHSAGGGVARLGLANTSRSEPGLVFNNSVPRPSVLMQTQPTVEQRGNRNTYV
KNHSISNHYMKRTVSQTHPLYPLNGSGQMHKHSQYRVSQPEMNKTRSQYTVTDSSSKAQI
NSEVNGNSVSSNITMQEAVLLLSSKDEKLQNGGASYIQHNTFINDKAKEEVCTLNGIPPL
VRLLQSPNSQVKGTASAALRNLTFQNNKNKEEIQRCDGIPEVVAQLRDSESAELDKQLTG
LLWNLSSVDNLKSDLLKNALPVLMERVILPYTKGSRDTVSADVFCHATGCLRNLSSPNEA
SRQTMRKCRGLIDGLAAYIKECVENKKTEDEALEHSVSTLHNLTFHLEEEFSSLFININS
LAKNMMSNASQNNTNSVGCFNAQSKPLQSDRPFDYAVIEDPQPNGAGLLIHSKTLKDYLS
LIRLTERQSLQDACWGILQNLTAHESAVSYVMSQIIVKKLNGIHYISPFLKSDKVNMQKS
AMGLVVNLIKNPNLCSVVGEKAVPDLLSVLSKDTAGANESDDALAFACQAASGLVLNNVE
LTKRHLSEKLIKSLSSISQNYYFPKSNKAASVLLIRMWSNKELQSSLKKLGLSKSMFIND
TTMAVQKSLQVVD
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtgcggatcctctgaaatcggcgatttccatcaggggcgcggacgacacgtcg
ctggctctgccgtcggcgaatgagtatcattcccgggagcagcgcgtcagggcgcaagtg
caatctctgaggaggacgaagtcgaggcactccagcagcggcaggagcgaatcttcttgt
ctttccccatcaagccccgagtacgactctgtgtttctagatggcgcaaagtcatctcag
ttgagttcatctaatggaagcgtatttttgagcaatggctcctcaaaagtttttaccaca
aacagaaatatgaataaccaacacatgatcggtaacatgaaaagagccaacatgaggaag
cagactatgaatcactatgagagcaggcacagcgctggtggcggtgtagcccgtctgggt
cttgccaacaccagtcgcagcgagcccgggctggtctttaacaacagcgtcccacggccg
tctgtcctaatgcagacacaaccaaccgtagaacagcggggcaacaggaacacctatgtg
aaaaaccacagcatcagcaatcactatatgaagaggaccgtctcccaaacccaccctctg
tatcctttaaatggatcgggtcagatgcacaagcacagccagtacagagtcagtcaacct
gaaatgaacaagacgcggtcgcaatacaccgtcaccgattcttcatccaaggctcaaata
aactcagaagtaaatggaaacagtgtgagttctaacatcactatgcaggaagctgtgctg
cttctttccagcaaagatgagaaactccaaaacggtggcgcttcctacattcagcacaac
actttcattaacgacaaagcaaaagaagaggtttgtactttgaatggtatcccgcccctc
gtgcgtctgctgcaaagccccaactcacaggtcaaaggcacggcctctgctgccctgcga
aatctgacctttcagaacaacaaaaacaaagaagagatccaacgctgcgacggcataccc
gaggtggttgctcagctcagagactcagaatctgcagaactggataaacagctgacaggt
cttttgtggaatttgtcgtctgtagacaacctgaagtcggacctgttgaagaatgctctg
cctgttctaatggagcgtgtgattctgccttacacgaaaggctctagagatactgtcagt
gctgatgtcttctgccacgccacaggatgccttcgaaacctcagcagtccaaatgaggcc
agcagacagacgatgaggaaatgtcgaggtttgatcgacggcttagccgcttacataaaa
gaatgtgtggaaaacaagaaaacagaagatgaggctttagaacactctgtgagcactctg
cacaatctgacatttcacctggaagaagaattttcaagtctgttcatcaacataaattct
ctggcgaagaatatgatgagtaacgccagtcaaaataacaccaactctgttggctgcttc
aatgcacaaagcaaacccctacaatctgatcgtccctttgactatgcagtcattgaggat
ccgcagcctaatggagcaggccttttgatccactccaaaacgctgaaggattacttgtct
ctgatccgcttgaccgagcgccaatcgctgcaggatgcctgctggggcatactgcaaaat
ctcactgcgcatgaaagtgctgtctcttatgtaatgagtcagatcattgtgaagaaactg
aatggcatacattatatcagccccttcttaaagtcagataaagtcaacatgcagaagagc
gcaatgggtttggtggtaaatttgatcaagaacccaaatctgtgcagtgttgttggtgaa
aaagccgtcccagacctactaagtgtcctctcaaaagacacggctggagccaacgagtcc
gatgacgctcttgcttttgcctgtcaggctgccagcggcctggttctgaacaacgttgag
ttgaccaaaagacatttaagcgaaaaactgattaaatccctgagcagcatcagccaaaac
tattatttccccaaatcgaacaaagctgcttctgttcttctcatcagaatgtggtctaat
aaagaacttcagagctctttgaaaaagctggggctgagcaagtctatgtttatcaatgac
accaccatggcagtacaaaaatctctccaagttgtggattaa
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