Poecilia reticulata (guppy): 103466314
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Entry
103466314 CDS
T05149
Name
(RefSeq) sodium channel protein type 4 subunit alpha-like isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pret04040
]
103466314
Ion channels [BR:
pret04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
103466314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
IQ_SCN5A_C
Na_trans_assoc
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
103466314
NCBI-ProteinID:
XP_008410034
LinkDB
All DBs
Position
LG6:complement(21241871..21262549)
Genome browser
AA seq
1643 aa
AA seq
DB search
MSWFEFWSNRLQQAEHLMKTQLTPPQRNQLHGNHEVRLELQNQRMTSLLPPVGVEVFRRF
MPASLEEIQQEAEKNKKKPEKDQSKPASHLQAGKPLPFIYGDPPPELLSTPLEDLDPFYQ
SQKTFTVICKKKLIHRFNADPACYLLSPFNCLRSSAIKILLHPVFSLFFILTIVTNCVFM
TMPHMLWTINVEYVFMIIYTGEVILKLLSRGVCFGRFTFLRDPWNWLDVLNITASVIALS
VGLREFAALKTISRVLKLFSYLPGLKKTAERLVQSLKWLAVATVLTVFVLSVLALLGMQF
FMGVLKHKCVNSSPSGMMDTPTTEQPEYFLTNKTINFYDNFVFEDYIDNVENLYFMPGQS
DHMLCGNSSDSRRCPMGFTCIKTGRNPEYGFTSFDTFGWSLLAVVRIAMQDRLDVLLQLT
LQAAGKANISVFVLIFFPGCFLVVSLSVAAVAIALVKQEKAEAAEAKKTEEEFSWIVKVL
TKRVDNEVTGETKLLGGHNSPQKKKPAARTLDQENITVEDTKDEVQPSCCSCADRILQGE
CCICSQWLKLKLRPFVLSQFFDLGIIVCIIINTVFMAVEHHRMTMDFQWKLANLHLVFTA
IFTAELLLKVLALGIKGYFKVSWHIFDFIIVIHSLLDFFLSGIEGLSLFSVALLRPLRLG
RWWSALHLLMKITWFSVGNLSVVLVFVAFMFAVVGTQLFQQNYQENVCMLSSRCELPRWH
MMDFSHTFLLVFRVLSGEWIECMWDCMKISNKGLCVIYYMAVVLIGNLLVVNLFLYLLLS
PSCANKPGAAAGQGPNKRHAGSWILESFRALTGRRTYADTDQKVESKNKDRQHYLALTPV
SNDSVKDSSVVELSGSPGNEFKIQADTNKEEKKQKIGDVQKLQDNENQTENSPGDCCCAI
CYSCCPIQDIDTSKGAGRGWYKFRKACLLIVQHRLFEIFIIFIILLSSAALALEDTLLFH
RPVLQMVLDKADQVFTFLFLMEMLLKWTAFGFRKYFSSFWCWLDFLILDVSLFSSVGVML
GYSAAYLRTLRALRTLRVPSRFKGMRVVLRDMAAIAPSMCNSLLVVVFVWLIFSILGVNM
FAGKFAYCSNHTDDVIFEVDNRTQCYELNDNSSTGIFWKYNDFNFDHVGMGLLSLLIMAT
STGWTEIIYAAVDSTKVDIQPEYESKPVMYLYFVLFIVFGCFFSANLFIRFFVDALHQLS
NKAGGKHVFMTEEQLKFHGTIRKMFPKSPEKAAPRPTNRFQARLFDLMTAPLFEILVVAL
ISVNAVVMMMDSDDLSEQGQEVLMWFLFVFIILYCIEFFLKITALRRHYFNFGLNILDFV
VLIFMILGLFFSELLEKYFVSPAAFFILRLARISRVLPFFRLGRRIQMLLTGFMMSLPAL
MNIGFLFLLVVYTYSFVGMRIFYMINFGTIGDSMISMILFSPSSAWSLLVWNSTKYSPPT
IVPLWYWANLSAGVVFFCSYVLLHLLLVVHLFIAVILESFNSREAEDAVLLQMFYNTWRE
FDPEALQVIRYSELSDFCDALQDPLRIPKPNNIRLINMDLPLLPGDQICCLDVLKALMTQ
TYGEEREMDSLKAQLEKKFTGNNTTKVSHEPISSTLQRKQEDVAAAVIQRAFRKHQVRNR
PDGADGAPDQPEDEATGMLVSSQ
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
atgtcctggtttgagttttggagcaacaggctgcagcaagctgagcatctgatgaaaaca
cagctgacccccccccagagaaaccagttacatggcaaccacgaagttcggctggagcta
caaaaccagaggatgacatctctgctgccccctgttggcgtggaggtcttcaggcgcttc
atgccagcctcgttggaagagatccaacaagaagcagagaagaacaaaaagaagccagag
aaagaccagagcaagccagccagtcacctgcaggcggggaaacctctcccttttatttac
ggggacccgcccccagagcttctcagcacgcctctggaggatctggatcccttctaccaa
tcacagaagaccttcaccgtcatctgtaaaaagaagctgatccacaggtttaatgctgat
ccggcctgttacctgctcagcccattcaactgtttgagatcctccgccatcaagattctc
cttcaccctgtattcagcctcttcttcatcctgacgattgtgaccaactgtgtttttatg
acgatgcctcacatgttgtggaccataaacgtggagtatgtgttcatgattatctacacc
ggtgaggtcatcctgaagcttttgtcgcgaggcgtctgctttggacgattcaccttcctc
agagatccctggaactggctggatgtcctcaacatcactgcatctgttattgcgttgtct
gttggtttgagggagtttgctgctttgaaaacgatttctcgtgtgttgaagctcttcagc
tacttgccaggtctgaagaagacagctgaaaggcttgtgcagtcgttgaagtggctggct
gttgccacggtcctgacggtgttcgtcctgagtgtcttagctctgcttggcatgcagttt
ttcatgggtgtcctcaagcataaatgtgtcaattcttctccatcgggaatgatggacaca
ccgaccactgagcaacccgagtacttcctcaccaacaagacaattaatttctacgacaac
tttgttttcgaggattatatcgacaacgtagaaaacctttatttcatgcctggtcagtct
gaccatatgctatgtgggaactcctcagattctagacgctgcccaatgggtttcacctgc
ataaagacagggaggaacccggagtatggatttaccagctttgacacgttcggttggtct
ctgctggctgtggtcaggatcgcgatgcaggatcgcttggacgtcctgctgcagctgaca
ttgcaagcagcaggtaaggccaatattagtgtgtttgtgctcatcttcttccctggatgt
ttcctggtggtcagcctctctgtggcagcggttgccatagcactggtgaaacaggaaaag
gctgaggctgctgaggccaaaaagacagaagaagagtttagctggattgtgaaggtgctg
acgaagagagtcgacaatgaggtcactggtgagacaaagctgctgggaggacataactca
ccacagaagaagaaaccagcagcaaggactctcgatcaggagaacatcactgtggaagat
actaaggacgaggtccagccttcctgctgctcctgcgcagacagaatcttgcagggcgaa
tgctgcatctgctcccaatggctcaaactgaagctccgcccctttgtcctgagtcagttc
tttgatctgggaattattgtttgcatcatcatcaacactgtcttcatggcagtggaacat
catagaatgacgatggattttcaatggaagctggccaatttgcatctggtcttcactgcg
atcttcacagccgaacttctcctcaaagttctggctctgggcattaaaggctacttcaag
gtgagctggcacatctttgacttcatcatcgtcatccacagcctgttggattttttcctg
tctggcatcgagggtctgtctctgttctcagtggcattgttgcgaccactgaggttgggt
cgttggtggtccgccttgcacttgctgatgaagattacctggttttcagtgggaaacctc
agtgtggttctggtcttcgtggccttcatgtttgccgtggtcggcacacagctctttcag
cagaattatcaagaaaatgtctgcatgctctcctcccgctgcgagcttccacgctggcac
atgatggacttttcccacaccttcctactcgtcttcagagtcctcagtggcgagtggatt
gagtgcatgtgggattgcatgaagatctccaacaagggcctttgtgtcatctactacatg
gcagttgtgcttatcggaaacctcctggtggtgaatttgtttctctatctgctcttgagc
ccatcctgtgctaataaaccaggcgctgcagcaggacaaggacctaataaacgtcatgct
ggatcctggatcctggagtcttttagggctctaacaggaagaaggacctatgctgacacc
gatcagaaagttgagtcaaagaacaaagacagacagcactatctggctttaacgcctgtc
agtaatgattcagtcaaagactcaagcgtggtggaactcagcgggtctcctgggaatgaa
ttcaaaatccaagctgacacaaacaaagaagagaagaagcagaaaattggtgatgtgcag
aagcttcaggacaacgaaaatcagacagaaaactcacctggagattgctgctgtgcaatt
tgttacagttgctgtccgatccaggatatagacacatccaagggagcagggagggggtgg
tataagttcaggaaggcttgtctcctcatcgtacaacacagattatttgaaatcttcatc
atctttatcatcctgctgagcagcgctgctttggcgttagaagacacactgctgttccac
cggccagtcctgcagatggttctggacaaagcagatcaggtgttcaccttcctgttccta
atggaaatgcttctcaagtggactgcttttggattcaggaaatacttcagcagcttttgg
tgctggctcgactttctcatcttagacgtatctctgttcagctcggttggtgtcatgctg
ggatactctgctgcatacctgaggaccctgagggcgctgaggaccttgagggtcccgtct
cgcttcaaaggcatgagggtggtgcttcgggacatggcggccatcgcaccctccatgtgc
aactctctgctggtcgttgtgtttgtctggctgatcttcagcatcctgggagtgaacatg
tttgcaggaaagttcgcttactgttccaaccacacagatgacgtaatctttgaagtggat
aacaggacgcagtgttatgagctcaatgacaacagctccacaggcatcttctggaagtac
aatgacttcaactttgaccacgtggggatgggtttactttctctgctgatcatggccaca
tcaacaggctggacagaaatcatctacgcagctgtggactccacgaaggtggacattcag
cccgaatatgagtccaaaccggtcatgtacctgtactttgtccttttcatcgtctttggc
tgcttcttcagcgccaatctcttcatcaggttctttgtcgatgctctccatcagctgagc
aacaaggctggaggaaaacatgttttcatgacagaggagcagctgaagtttcacggcacc
atcaggaagatgttccccaagtcacctgagaaagctgctccacggccaacgaaccggttc
caggctcgactcttcgacctgatgaccgctccgctgtttgagatcctggtggtggcgctg
atctctgtgaacgcagtggtgatgatgatggattcagacgatctgtctgagcagggacaa
gaggttttgatgtggtttttgtttgtcttcataattctgtactgcatcgagttcttcctg
aagatcactgctctcagacggcactacttcaacttcggcctgaacatcctggactttgta
gtcctcatctttatgatcttaggcttgttcttcagtgaattattagagaaatattttgtc
agcccagctgccttctttattcttcggctggctcgcatcagcagagtcctcccattcttc
cgtttgggcagaaggatacagatgttgctcactggcttcatgatgtctcttcccgcactc
atgaacattgggttcctcttcctccttgtggtgtacacctactcctttgttgggatgcgt
attttttacatgatcaactttgggacaattggggacagcatgatcagtatgattctcttc
agcccgtcctcggcctggtcccttctggtgtggaatagcacaaaatattctccgcccaca
atcgtcccactttggtactgggccaacctatcggcaggcgtcgtcttcttctgctcctat
gtcctgctgcacctcctgctggtggtccacctcttcattgccgtcatcctggagagcttc
aacagcagggaagctgaagacgccgttcttctgcagatgttttacaacacctggagagag
tttgatcctgaagccttacaggtcatacggtacagtgagctgtcagatttttgtgacgcg
ctccaggatccgctgaggattcctaagccaaacaacatccggttgatcaacatggatctg
cctctgctcccgggagaccagatctgctgcctggatgtcctgaaagcactcatgactcag
acatatggtgaagagagggaaatggactctcttaaagcccagctggagaagaaattcaca
ggcaacaataccacaaaggtgtctcatgaaccaatcagcagcaccctgcagaggaaacag
gaagatgtagcagcagcagtgatccagagagcattccggaagcaccaggtgcggaatcga
cccgatggggccgatggagctccagaccagcctgaggacgaagccacaggcatgttggtg
tcttcccaatga
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