Poecilia reticulata (guppy): 103468275
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Entry
103468275 CDS
T05149
Name
(RefSeq) low-density lipoprotein receptor-like
KO
K12473
low-density lipoprotein receptor
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03272
Virion - Hepatitis viruses
pret04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
103468275
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103468275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pret04131
]
103468275
Membrane trafficking [BR:
pret04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
103468275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
Plasmod_Pvs28
Vgb_lyase
EGF
EGF_3
Psg1
hEGF
Motif
Other DBs
NCBI-GeneID:
103468275
NCBI-ProteinID:
XP_008413452
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All DBs
Position
LG1:complement(23687810..23699796)
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AA seq
849 aa
AA seq
DB search
MTGAWKGLSTCWCVLMLIHCLAQTDAAFMCSSTQFKCGNGRCVTRRWICDGNNDCGDGSD
ELEAVCSAKTCMESQFNCGAPLNQCIPKSWHCDGKADCDNAADERNCTIKECKSGEFRCT
NGQCISKAYVCDKDKDCSDGSDEEDCPKPTCHPRSFQCNNSICVPMLWKCDGDRDCLDGS
DEWPENCEGRQPLKKPSRCGAHDFECTNGECIHRTWRCDGTPDCSDQSDEFNCSQPSCHD
GQFQCGNGVCISEALKCNSANDCGDNSDEAGCQTDNVCEGPTNFKCGSGECISMDKVCDS
NGDCNDRSDEPLECGKNECSTGSNSCSHQCNDLKIGYNCSCPAGYRLKSDNRTCEDIDEC
EVPDTCSQICINLPGSYKCDCNDGYQIDPVSKTCKAESGTVATLFFTTKHEVRELTVDRS
EYTRLIPELKNAMALDLDMPNKKIFWSDLSQKKIFSSNIDMASNSANHNVVIENGIEAPE
GLVVDWIHGNIYWTDSTLKTISVATTEGNKRKTLIDERLGRPRAITIDPENNFMYWTDWG
DEPRIEKCGLNGVGRVALVTDNIEWPNGITLDMVNQRLYWVDAKLHTIFSVDVNGGARHT
VISGEENVHHPFSLTVFEEKVFWTESFRGTVSSANRLTGKYINELVTDLQNPEGLVLYHS
LKQPISINWCREGNSINGGCEHLCLPAPLLDESSPKYTCACPDNMVLAADMKKCVAAAPP
ARTDPPVMSKTTTTKPATRGTTPTSSVRTTEKPAGTAQGFQKAVMPEEAPASHPVALYVF
LPLAIIAALVCGAVLFWRNWHRKNTNTIHFANPVYQKTTEDEVHICRNGSDGFVYPERQI
VSMDDMEIA
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgaccggggcgtggaagggactgtctacatgttggtgtgtgttgatgctgattcactgt
ctggctcaaacagatgcagccttcatgtgcagctccactcagtttaagtgcggaaacggg
agatgcgtcacccgcaggtggatctgtgacggaaacaacgattgtggcgatgggagtgat
gaactagaagctgtctgctcggcaaaaacgtgcatggagtcccagttcaactgcggggca
cctttgaaccagtgtataccaaagagctggcattgtgacggcaaagctgattgtgacaac
gccgctgatgagagaaactgcactataaaagaatgcaagtccggtgagtttagatgcacc
aatggtcagtgcatatccaaggcttacgtttgtgacaaagacaaggactgctctgatggc
tcagacgaggaggattgtcccaagcccacctgccaccctcggtccttccagtgcaacaat
tcaatttgcgtgccaatgctgtggaaatgtgacggagacagggactgtctggacgggtct
gacgagtggccggagaactgcgaggggaggcagccgttgaagaagccgtcgcgatgtggc
gcccatgattttgagtgcacaaacggtgaatgtattcataggacttggaggtgtgatgga
actcctgactgctcagaccagtcggatgaattcaactgcagtcagcccagctgtcatgac
ggtcaattccagtgtgggaacggtgtctgtatcagtgaagccctgaagtgtaactctgcg
aacgactgtggggacaacagtgatgaagctggctgtcaaacagataatgtgtgtgaaggt
ccaaccaacttcaagtgtggcagcggggagtgcatcagcatggacaaagtatgtgactca
aacggagactgcaacgaccggtctgacgaacctcttgagtgtggcaaaaacgagtgttca
acaggaagtaacagttgttctcatcaatgcaatgacctgaagatcggctacaactgctcc
tgcccggctggatacagactgaagagtgacaatcgaacatgtgaagacattgatgaatgt
gaagtgccagacacctgcagtcagatctgcatcaacctgcctggaagctacaagtgtgac
tgcaacgacggctatcaaattgatccagtgagcaaaacgtgcaaagctgaatcagggaca
gtggccacgctgttcttcaccacaaagcacgaggtcagggagctcacagtggaccgcagt
gagtataccaggctgatcccagagctgaaaaacgctatggctctggatctggacatgccg
aacaagaagatcttctggtcggacctctctcagaagaaaatctttagctcaaacattgac
atggccagcaactctgctaatcacaacgttgtgattgaaaacgggattgaagccccagaa
ggccttgttgtggattggatccatggcaacatctactggactgacagcaccttgaagacc
atctctgtggcaactacagaaggcaacaaaaggaagaccctcatcgatgagagacttggg
aggcccagagccatcacaattgacccggaaaataactttatgtactggactgactgggga
gatgagcctaggattgagaagtgtggactcaacggagtcggtcgtgtcgccttggtgact
gataacattgaatggcccaatggcatcacccttgatatggtaaaccagcgtctgtactgg
gtggatgccaagcttcatactatcttcagtgttgatgttaacggaggggccagacacacg
gtcatatctggtgaagaaaatgtccatcatcccttctcactgactgtctttgaggagaaa
gttttttggacagagtccttccgtggcacagtttccagtgctaaccgcctgacaggaaag
tacatcaatgaattggtgactgacctgcaaaatccagagggccttgttctttaccacagc
ctgaagcagccaatcagcattaactggtgcagagaaggcaacagcataaatggaggctgt
gagcacctgtgccttcctgctcctctgcttgacgagagctctcctaaatacacctgcgcc
tgtccagacaacatggtcctggccgctgacatgaagaaatgtgtggcagctgcacctcct
gccaggactgacccacctgtcatgtccaagacgaccaccactaaaccagctacacgtggc
accacacctacctcatctgtccggaccacagagaaacctgctggcactgctcaaggcttc
caaaaagccgtgatgcctgaggaagctcctgcatctcatcctgttgctctctacgttttt
ctaccactcgcgatcatagcggcactggtgtgtggagcggtgttgttttggagaaactgg
cacaggaagaacaccaacaccatccacttcgccaatcccgtgtaccagaaaaccaccgag
gacgaggtgcacatctgcaggaacggctccgacggcttcgtctatcccgagaggcaaatt
gtgagcatggatgacatggaaattgcatga
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