Poecilia reticulata (guppy): 103470154
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Entry
103470154 CDS
T05149
Name
(RefSeq) slit homolog 1 protein-like isoform X1
KO
K06838
slit 1
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pret00536
]
103470154
Glycosaminoglycan binding proteins [BR:
pret00536
]
Heparan sulfate / Heparin
Axon guidance molecules
103470154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
EGF
LRR_5
Laminin_G_2
Laminin_G_1
LRR_9
LRR_1
EGF_TEN
LRR_14
LRRNT
hEGF
LRRCT
EGF_Teneurin
EGF_CA
EGF_DL_JAG
EGF_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
103470154
NCBI-ProteinID:
XP_008416566
LinkDB
All DBs
Position
LG1:complement(27041187..27098874)
Genome browser
AA seq
1555 aa
AA seq
DB search
MPAGRRKDGAGSAAGLWTMLAWAVLVGPGGAEACPAPCSCLGSTVDCHGRGIHSVPKNIP
RGTERLDLNENNLTVITKTDFSGLKHLRVLHLMENKISSIERGAFDELKELERLRLNRNR
LSQLPELLFQKNEALSRLDLSENAIQAIPRRAFRGATDIKNLQLDKNHITCIEEGAFRAL
RSLEVLTMNNNNISSIPVSSFNHMPKLRTFRLHSNALRCDCHLAWLSPWLRQRSALGLYT
QCSSPPALRGLNLAELRKSDFACSAHSGSAFVQPCSLASGSCPPMCSCSNNIVNCRGRGL
TAIPAHLPEAMTEIRLEQNGIKSVPPGAFTSYKKLHRIDLSNNQISEIAPDAFHGLRALN
SLVLYGNKITELPSGVFDGLVSLELLLLNANKIHCIRAAAFKDLENLALLSLYDNKIQSL
AKGTFSSLHSIQTLHLAQNPFVCDCHVKWLADFLGSNPIETSGARCASPRRLANKRIAQI
KSHKFRCSAKEQYHIPGTEDRRLSYECNSKPVCPAKCRCEANVVDCSNLRLTKFPEHLPP
STEELRLNNNDLSMLEATGAFKGLSHIKKINLSNNKISEIEDGAFEGASSVGELHLTANH
LESVRGSMFRGMEGLRMLMLRNNRISCIHNSSFTGLPNVRLLSLYDNQLTTILPGAFDTL
PNLSTLNLLANPFTCDCHLSWFGAWLRSRRIVTGNPRCQSPAFLRGIPLQDVAVPDFRCE
DGSVLEDRSCVAGPQCPSQCSCMDTVVRCSNKHLQALPRGLPRNITELYLDGNQFTSVPK
ELASFKYLQLVDLSNNKINSLSNDSFSNMSQLTTLILSYNSLQCIPPLALAGLRSLRLLS
LHGNDISELQQGIFSDLASLSHLAIGANPLYCDCRLLWLSDWVKSGYKEPGIARCAGPRG
LEGKLLLTTPADKFQCLGPVDISVQAKCTPCVSSPCQNQGTCQIHQSQQYTCACKSGFTG
KHCETPVDACVSNPCTNGGSCLRDEQTGGFSCACAFGFHGTFCEVNVDDCEDHGCDNGAT
CVDGVGNYTCLCPPNYRGLLCEEEDDVCSPGRNPCQHQSTCISSPTGPRCVCIPGWVGPD
CGIDYNECADHRCQNSAQCIDHLDGYSCVCPQGFSGEFCEVTDLQQTPCQMAKCQNGAPC
NDKLGTAICQCPPGFEGQSCEKLVSVNFVDKDSYVELQDVKNWPQSNITLQVSTAEDNGI
LLYNGDHEPIAVELHQGHVRVTYDPGNQPATAIYSSETVNDGNFHTVELVTFNQMVNLSV
DGGEPTTLDSQGRGQPLTGETPLYVGGMPEEVIPTSRGLSSQSLNTSSFHGCIRNLYINH
ELQDFTRSQMKPGVVPGCQPCRKLYCLHGICQPNSAQGPQCHCQPGWTGQHCDQPITVGL
SGGDVVTMANGINPCEGNKCVKGACMVLDAQTYRCECEKGFRGALCNLQEEPAGSCHRLQ
CLHGRCQKTEDGESCVCEQGYTGEICATETPCRGEPVRDYHRLQRGSILCQTSKPFSWVD
CRGHCRAEAERGATAVSCCAPLRVRRRRITFECDDGTSFTQDVEKPVECGCKECV
NT seq
4668 nt
NT seq
+upstream
nt +downstream
nt
atgccagcggggagaagaaaggatggagccgggtcggcggcgggtctgtggacgatgctg
gcgtgggcggtcctggtgggtccgggaggcgctgaagcgtgtccggctccctgcagctgc
ctggggagcacggtggactgccacggccggggaatccactccgtccccaaaaacatcccc
agagggactgagaggctcgatctgaacgagaacaacctgacggtcataaccaagacagat
ttctctggtcttaaacacctcagagttcttcacctgatggagaacaagatcagcagcatt
gaaagaggagcctttgatgagctgaaggagctggaaagactgcgtcttaacagaaatcgt
ctcagccagcttccagagctgctgtttcagaagaacgaagctctgtctcgactggatctg
agtgaaaatgccatccaggccatcccacggcgagcgttcagaggagccacagacatcaaa
aaccttcagctggataaaaaccacatcacctgtatagaggagggagcgttcagagctctg
cggtccctggaagtgctcacgatgaacaacaacaacatcagcagcatccccgtctccagt
ttcaaccacatgccgaaactgcgaaccttccggctccactccaacgcgctgcgctgtgac
tgtcacctggcctggctgtcgccatggctacggcagcggtctgcgctgggcctctacacg
cagtgcagttcccctccggctctgcgggggctcaacctcgcagagctgcgcaagagtgac
ttcgcctgctcagcccacagcggcagcgccttcgttcagccgtgcagtttggcgtccggt
tcttgtcctccgatgtgttcctgcagcaacaacattgtgaactgcagaggaaggggcctc
accgccatacctgcccacctgccggaggccatgacggagattcgtctggagcagaacggc
atcaagtcagttcctcctggtgcgttcacctcctacaagaagctccaccgcatagacctg
agcaacaatcagatatctgagattgctcctgatgcatttcacggcctccgagcgctcaat
tcgctcgttctgtatgggaataaaatcactgagctgcccagtggagtattcgatggcttg
gtttctctggagctgctattgctgaatgcaaataaaatccactgtatccgtgcagcagcg
ttcaaagacctggaaaaccttgcccttctttctctgtacgacaataagatccaaagtctg
gctaagggaacctttagctcactgcacagcatccagacactccacctggcccagaacccg
tttgtctgtgactgtcatgtgaagtggctggctgacttcctgggttcaaaccccatcgag
accagcggagctcgctgcgccagccctcgtcggctcgccaacaaacgcatcgctcagatc
aagagccacaagttcagatgctccgccaaggagcagtaccacatcccaggcactgaagat
cgacgcctgagctacgagtgtaacagtaagcctgtatgtcctgctaaatgtcgctgtgag
gccaatgtggtggactgctccaatctgcgcctcaccaagttcccagagcacctgccgccc
tccaccgaagagctgcgtcttaacaacaatgacctgtccatgctggaggccactggcgcc
ttcaagggtctttctcatataaagaaaattaacctgagcaacaacaagatttcggagatc
gaggacggtgcatttgagggcgcctcgtcagtgggggaacttcacctgacagccaaccac
ctggagtcggtgcgagggagcatgttcagaggcatggaggggctgcgcatgctgatgcta
aggaacaacaggatcagctgcatccataacagcagcttcacagggctgcccaacgtcagg
ctgctctccctctacgacaaccagctcaccaccatcctgcctggagccttcgacactctg
cccaacctctccactctaaacctgctggccaacccctttacctgcgactgccacctgtcc
tggttcggggcgtggctccggagccgccggatcgtgacggggaaccctcggtgccagagc
ccggctttcctgcgagggattcctctgcaggacgtagcggtccctgatttccgctgcgag
gatggttctgtgctggaggacaggagctgcgtagcggggcctcagtgtcccagtcagtgt
tcctgcatggacacagtggttcgctgcagcaacaaacacctgcaggctctgcccagagga
ttaccacgtaacatcaccgaactgtacctggatggaaaccagttcaccagcgtccctaag
gagttagccagcttcaagtacctgcagcttgtagatctgagcaacaataaaatcaactcg
ctgtccaatgactccttctccaacatgagccaactcacaactctgatcctcagctacaac
tcgttacaatgtatccctcctctagctctggccggcctgcgctccctaagactgctctct
ctccatggcaacgacatctctgagctgcagcagggaatcttcagtgacctggcctccctg
tctcacctagcaatcggagccaaccctctgtactgtgactgccggctgctctggctgtca
gactgggtgaagagcggctataaggagccgggcatcgcacgctgcgccggcccacggggc
ctggagggcaagctgctgctcaccacacctgctgacaagttccagtgtctgggtccagtg
gacatttctgttcaggccaaatgcactccatgcgtttcctccccttgccagaaccaggga
acctgccaaatccaccaatcccagcagtacacctgcgcctgcaagtcgggttttacgggt
aaacactgcgagactccagtcgatgcttgtgtcagcaatccctgcaccaatggaggaagc
tgcctgagagacgagcagacaggaggcttcagctgcgcgtgtgcatttggtttccatggc
acattttgtgaggtcaacgtggacgactgcgaagatcacggatgtgacaatggcgccacc
tgtgtcgatggagtcggcaactacacctgcttgtgtcctcctaactacagaggtctgctt
tgtgaagaggaggatgatgtttgttctccaggtagaaatccttgtcagcatcagtccacc
tgcatcagcagtcctacaggccccaggtgtgtgtgtatccccggctgggtgggaccagac
tgcggcatcgactacaacgagtgcgcggatcaccgctgtcagaactcagctcagtgcatc
gaccatctggacggttacagctgcgtctgcccgcagggattcagtggcgagttttgtgag
gtgacagatcttcagcagacaccctgccagatggccaagtgtcagaatggcgctccctgt
aacgacaagttggggaccgcaatctgtcagtgtccgcccggctttgagggccagagttgc
gagaagctggttagcgtcaactttgtggacaaagattcttacgtcgaacttcaggatgtg
aaaaactggcctcagtccaacatcacgttgcaggtgtcaactgcggaagataatggcatc
ttgctgtacaatggagatcatgagccgatcgctgtagagctccatcagggtcatgtaagg
gtcacctatgaccctgggaaccagcctgccaccgctatttacagctctgagacggtaaac
gatggtaatttccacacggttgagctggtgacctttaatcagatggtgaacctgtctgtg
gatggaggagagccaacgactctggacagccaaggccgcggccagccgctgactggagag
acgcctctttacgtgggaggtatgcctgaggaggttataccgacttctcgaggcctctcc
tctcagagtctcaacacgtccagtttccacggctgcatcaggaacctctacataaaccat
gagctgcaggactttacccggagccaaatgaagccgggggttgtaccgggctgccaaccc
tgccgcaaactttactgcctgcatggcatatgccaacccaacagtgcgcagggcccccag
tgccactgccagccaggttggacaggtcaacactgtgaccagccaatcactgtaggcctc
agtggaggcgacgtcgtcaccatggcgaatggtatcaacccctgtgagggaaacaagtgt
gtgaagggcgcctgcatggtgctggatgctcagacctaccgctgtgagtgtgagaaggga
ttcagaggagcgctgtgtaacctgcaggaggagcccgccggctcgtgtcacaggctgcag
tgtcttcacggccgctgtcaaaagacggaggacggagagagctgtgtgtgcgagcaggga
tacactggagagatctgcgctacagagaccccatgtcgaggtgagccggtcagagactac
caccggctgcagcgcggctccattctctgccagacatcaaaaccgttctcctgggtcgac
tgtcggggtcactgtcgggctgaagccgagcggggagccaccgccgtttcctgctgcgcc
cctctgagggtccggcggcggcggatcaccttcgaatgcgacgacggcacctcgtttacg
caggatgtggagaaacctgtggaatgtggctgcaaggagtgtgtgtaa
DBGET
integrated database retrieval system
