KEGG   Poecilia reticulata (guppy): 103471279
Entry
103471279         CDS       T05149                                 
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta
  KO
K05089  platelet-derived growth factor receptor beta [EC:2.7.10.1]
Organism
pret  Poecilia reticulata (guppy)
Pathway
pret04010  MAPK signaling pathway
pret04020  Calcium signaling pathway
pret04510  Focal adhesion
pret04540  Gap junction
pret04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:pret00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    103471279 (pdgfrb)
   04020 Calcium signaling pathway
    103471279 (pdgfrb)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    103471279 (pdgfrb)
   04540 Gap junction
    103471279 (pdgfrb)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    103471279 (pdgfrb)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:pret01001]
    103471279 (pdgfrb)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:pret04090]
    103471279 (pdgfrb)
Enzymes [BR:pret01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.10  Protein-tyrosine kinases
    2.7.10.1  receptor protein-tyrosine kinase
     103471279 (pdgfrb)
Protein kinases [BR:pret01001]
 Receptor tyrosine kinases (RTK)
  PDGFR family [OT]
   103471279 (pdgfrb)
CD molecules [BR:pret04090]
 Proteins
  103471279 (pdgfrb)
SSDB
Motif
Pfam: PK_Tyr_Ser-Thr Pkinase Ig_3 I-set Ig_2 ig V-set C2-set_2 RIFIN Adeno_E3_CR1 DUF3619
Other DBs
NCBI-GeneID: 103471279
NCBI-ProteinID: XP_008418392
LinkDB
Position
LG10:25459267..25493204
AA seq 1102 aa
MRRLTASVLHLMVTLTALVRFCPEVHSLEIIPDDKEFVLAQGSSLTLTCSGSSQAKWALK
RDDSTYYLNQLDESMNSRYKMFEPDATSVALNLTSVSWMHTGVYQCVDDNADEIKEVAVF
VPDPEVWFVKSIHGMVTKTSEESVVPCVATNPNITVILYEGDTNRPIKGHYVPSEGYRAR
LEDRAYVCRGELNGEVKESQEFNVISIAVAEDINPYINSSKTVLKQGEPLTINCTVHGVE
LVYFSWNIPHTVVVQVKPETHFFPKMHSCLTFPRTTVEHSGNYVCHVQEEVVGVTASSSI
NITVLEHGFVEVKPAQRQNISAKLQENVELRVDIEAYPPPQVRWTKDGTTIRGDKAITIR
PDHEIRYVTILSLVRVRTEQNGLYTVIISNGDDQKEVLFDLEVQVPAQIKDLTDHHHPGM
RDEVTCVAEGFPAPIIQWYSCNSMLKCSNRTAAWQPLQPQPEVVSIQTNVSYNQARKVSV
VKSQVVFHKPQQVTVRCAAANQAEHVSTREVKLVSSTWFSQVAVLAAVLALVVIVILSII
ILIAVWRKKPRYEIRWKVIESVSQDGHEYIYVDPIHLPYDLAWEMPRENLVLGRTLGSGA
FGRVVEATAYGLTHSHSSTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLLGA
CTKHGPLYLVTEYCRYGDLVDYLHRNKHTFLQYYAEKNQDSGCIISRGSTPVSQRKGYVS
FGSENDGGYMDMSKDEPSFYVPMQEQLDTIKYADIQPSPYESPYQQDLYQEQGGGRTDLV
IGDSPTLTYDDLLGFSYQVAKGMDFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDI
MHDSNYISKGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPMNE
IFYSALKRGYRMAKPAHASDEVYEIMKKCWDEKFEKRPEFSLLVHNVGNMLTDSYKKRYN
QVNENFLKSDHPAVARTKPRLSSLFPIANPAFGSPSPVPQSFPGRRSQSPRPGDGGREAD
AQEVISSYNEYIIPLPDLKPDEVFTEVPSESPASSLAVEEEADSTSQDTAETLPEEDQVE
NTSERDALLGSMGTPEVEDSFL
NT seq 3309 nt   +upstreamnt  +downstreamnt
atgaggaggctgacagcatctgtgctccacctgatggtcactttaacagctttggtgcgt
ttctgcccagaagtgcacagcctggagatcatccctgatgacaaagagtttgtcctggct
caaggttcgtctctcaccctaacatgctccggctccagccaggcaaagtgggcgcttaag
agggacgattcaacgtactacctgaatcagttagatgagagtatgaactcgagatacaag
atgtttgaacctgatgccacgtcggttgctctgaacctaacaagtgtgagttggatgcat
actggcgtgtatcagtgcgttgatgataatgccgacgagataaaggaagtggcagttttt
gtcccagatcctgaagtttggtttgtaaagagcatccacggcatggtgacgaagaccagt
gaggaaagcgtcgtcccctgtgtggccaccaacccaaacatcactgtcatcctgtatgag
ggggacaccaacaggcccattaaagggcattacgtacccagtgaggggtacagggcgcgg
ctggaggacagagcgtatgtgtgccgtggagagctgaacggggaggtcaaagagtctcag
gagtttaacgtcatcagcattgcagtggccgaggacatcaacccttacatcaacagttca
aagacggtcctgaagcagggcgagccgctgactataaactgcacggtgcacggagtggag
ctggtgtatttttcttggaatattccacacaccgtggttgttcaggttaaaccagaaacg
catttcttcccgaagatgcactcctgcctgaccttccctcgcactacggtggagcacagt
ggaaactacgtgtgccacgtccaagaagaggtcgtgggcgtcacagcttcttcaagcatc
aacatcaccgtgcttgaacacggttttgtggaggtgaaacctgctcagcggcaaaacatt
tcagccaagcttcaggagaacgtggagctgagagtggacatcgaggcctaccctccccct
caggttcgctggaccaaagacgggaccaccatcaggggagacaaagctatcaccatcaga
ccggatcatgaaataaggtatgtgaccattctcagcctggtgagggtgaggacggagcag
aatggcctctacacggtcatcatttccaatggagacgaccaaaaggaagttctctttgac
ttggaagtccaagttcctgctcagattaaagacctgaccgaccaccatcacccgggaatg
agagacgaggtgacctgcgtcgctgaagggtttccagctcccatcatacagtggtacagc
tgtaacagcatgctcaagtgtagcaaccgcacagcagcgtggcagccgctgcagccgcag
ccggaggtggtgagcatccaaaccaatgtcagctacaaccaggcgcgtaaagtcagcgtg
gtgaagagccaggtggtcttccacaagcctcagcaggtcacagttcgctgcgcggccgcc
aaccaggccgagcacgtcagcacgagggaggtcaagctggtgtccagcacgtggttctcc
caggtggcagtgctggctgctgttctggccttagtggtcattgttattttgtcgataatc
atcctcatcgctgtatggaggaagaaacctcgctatgaaatcagatggaaggtgatagag
tctgtgagccaggatggacatgagtacatttatgtggaccccatccatctgccctatgac
ctggcctgggagatgcccagagagaacctggtgctgggtcgcacgcttggatcaggagcg
tttggcagggtggtcgaggcaactgcgtacggtctcacgcattcccactccagcacaaag
gtggcagtgaaaatgttgaaatccacagccaggaggagtgagactcaggccctgatgtcc
gagctgaagatcatgagtcacctgggacctcacctcaacattgttaacctgctcggagcc
tgcaccaaacatggccctctctacctggttactgagtactgtcgctacggtgacctagtg
gactacctgcacaggaacaagcacaccttcctgcagtactatgctgagaagaaccaggac
agcggctgcatcatctccagaggaagtacccctgtcagccagagaaaaggttatgtgtcc
ttcggaagtgagaatgacggaggatacatggacatgagcaaagacgagccctccttctac
gtgcccatgcaggagcagctggacacaattaaatacgcagacatccagccgtccccgtat
gaatccccctaccagcaggacctctaccaggaacaaggtgggggcagaacggatctggtg
atcggcgactctcccaccctcacctacgacgatctcctgggcttcagttaccaggtcgca
aagggaatggacttcctggcctcaaagaattgtgtccatcgtgacctggcggccaggaac
gtattgatctgtgaaggcaagctggtgaagatctgcgactttggcctggccagggacatc
atgcatgattccaactacatctccaaaggcagcacattcctgcctctgaagtggatggca
ccggaaagcattttccacaatttgtacaccaccctaagcgacgtttggtcatatggcatt
cttctttgggaaattttcactctgggaggaactccttaccctgacttgcccatgaatgaa
atcttctacagtgctttgaagagaggctacaggatggccaagcctgctcacgcctctgac
gaagtgtatgagatcatgaagaagtgctgggatgagaaatttgagaagaggcccgagttc
tccctcctggtgcacaacgtggggaacatgctgacggacagctacaaaaagagatacaac
caagtgaatgaaaacttcctcaagagcgaccaccctgccgtggctcgcaccaagcctcgg
ctctcctctctatttccaattgccaacccagccttcggctctccctctccagtccctcag
tccttcccgggccgccgcagccagagcccgaggcctggagacggcgggcgagaggcagac
gcacaggaagtcatctcttcatacaacgagtacatcattcctctcccggacctaaagcct
gacgaagttttcaccgaagtgccgtcggaaagccctgcaagctctctggctgtggaggag
gaggctgactccacatctcaggacacggctgaaactcttccagaggaagaccaggtggag
aacacgagcgagagggacgcactgctgggctccatggggacgcctgaggtagaagacagt
ttcctgtag

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