Poecilia reticulata (guppy): 103471279
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Entry
103471279 CDS
T05149
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04010
MAPK signaling pathway
pret04020
Calcium signaling pathway
pret04510
Focal adhesion
pret04518
Integrin signaling
pret04540
Gap junction
pret04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
103471279 (pdgfrb)
04020 Calcium signaling pathway
103471279 (pdgfrb)
09133 Signaling molecules and interaction
04518 Integrin signaling
103471279 (pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103471279 (pdgfrb)
04540 Gap junction
103471279 (pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
103471279 (pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pret01001
]
103471279 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pret04090
]
103471279 (pdgfrb)
Enzymes [BR:
pret01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
103471279 (pdgfrb)
Protein kinases [BR:
pret01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
103471279 (pdgfrb)
CD molecules [BR:
pret04090
]
Proteins
103471279 (pdgfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
RIFIN
Adeno_E3_CR1
DUF3619
Motif
Other DBs
NCBI-GeneID:
103471279
NCBI-ProteinID:
XP_008418392
LinkDB
All DBs
Position
LG10:25459267..25493204
Genome browser
AA seq
1102 aa
AA seq
DB search
MRRLTASVLHLMVTLTALVRFCPEVHSLEIIPDDKEFVLAQGSSLTLTCSGSSQAKWALK
RDDSTYYLNQLDESMNSRYKMFEPDATSVALNLTSVSWMHTGVYQCVDDNADEIKEVAVF
VPDPEVWFVKSIHGMVTKTSEESVVPCVATNPNITVILYEGDTNRPIKGHYVPSEGYRAR
LEDRAYVCRGELNGEVKESQEFNVISIAVAEDINPYINSSKTVLKQGEPLTINCTVHGVE
LVYFSWNIPHTVVVQVKPETHFFPKMHSCLTFPRTTVEHSGNYVCHVQEEVVGVTASSSI
NITVLEHGFVEVKPAQRQNISAKLQENVELRVDIEAYPPPQVRWTKDGTTIRGDKAITIR
PDHEIRYVTILSLVRVRTEQNGLYTVIISNGDDQKEVLFDLEVQVPAQIKDLTDHHHPGM
RDEVTCVAEGFPAPIIQWYSCNSMLKCSNRTAAWQPLQPQPEVVSIQTNVSYNQARKVSV
VKSQVVFHKPQQVTVRCAAANQAEHVSTREVKLVSSTWFSQVAVLAAVLALVVIVILSII
ILIAVWRKKPRYEIRWKVIESVSQDGHEYIYVDPIHLPYDLAWEMPRENLVLGRTLGSGA
FGRVVEATAYGLTHSHSSTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLLGA
CTKHGPLYLVTEYCRYGDLVDYLHRNKHTFLQYYAEKNQDSGCIISRGSTPVSQRKGYVS
FGSENDGGYMDMSKDEPSFYVPMQEQLDTIKYADIQPSPYESPYQQDLYQEQGGGRTDLV
IGDSPTLTYDDLLGFSYQVAKGMDFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDI
MHDSNYISKGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPMNE
IFYSALKRGYRMAKPAHASDEVYEIMKKCWDEKFEKRPEFSLLVHNVGNMLTDSYKKRYN
QVNENFLKSDHPAVARTKPRLSSLFPIANPAFGSPSPVPQSFPGRRSQSPRPGDGGREAD
AQEVISSYNEYIIPLPDLKPDEVFTEVPSESPASSLAVEEEADSTSQDTAETLPEEDQVE
NTSERDALLGSMGTPEVEDSFL
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggctgacagcatctgtgctccacctgatggtcactttaacagctttggtgcgt
ttctgcccagaagtgcacagcctggagatcatccctgatgacaaagagtttgtcctggct
caaggttcgtctctcaccctaacatgctccggctccagccaggcaaagtgggcgcttaag
agggacgattcaacgtactacctgaatcagttagatgagagtatgaactcgagatacaag
atgtttgaacctgatgccacgtcggttgctctgaacctaacaagtgtgagttggatgcat
actggcgtgtatcagtgcgttgatgataatgccgacgagataaaggaagtggcagttttt
gtcccagatcctgaagtttggtttgtaaagagcatccacggcatggtgacgaagaccagt
gaggaaagcgtcgtcccctgtgtggccaccaacccaaacatcactgtcatcctgtatgag
ggggacaccaacaggcccattaaagggcattacgtacccagtgaggggtacagggcgcgg
ctggaggacagagcgtatgtgtgccgtggagagctgaacggggaggtcaaagagtctcag
gagtttaacgtcatcagcattgcagtggccgaggacatcaacccttacatcaacagttca
aagacggtcctgaagcagggcgagccgctgactataaactgcacggtgcacggagtggag
ctggtgtatttttcttggaatattccacacaccgtggttgttcaggttaaaccagaaacg
catttcttcccgaagatgcactcctgcctgaccttccctcgcactacggtggagcacagt
ggaaactacgtgtgccacgtccaagaagaggtcgtgggcgtcacagcttcttcaagcatc
aacatcaccgtgcttgaacacggttttgtggaggtgaaacctgctcagcggcaaaacatt
tcagccaagcttcaggagaacgtggagctgagagtggacatcgaggcctaccctccccct
caggttcgctggaccaaagacgggaccaccatcaggggagacaaagctatcaccatcaga
ccggatcatgaaataaggtatgtgaccattctcagcctggtgagggtgaggacggagcag
aatggcctctacacggtcatcatttccaatggagacgaccaaaaggaagttctctttgac
ttggaagtccaagttcctgctcagattaaagacctgaccgaccaccatcacccgggaatg
agagacgaggtgacctgcgtcgctgaagggtttccagctcccatcatacagtggtacagc
tgtaacagcatgctcaagtgtagcaaccgcacagcagcgtggcagccgctgcagccgcag
ccggaggtggtgagcatccaaaccaatgtcagctacaaccaggcgcgtaaagtcagcgtg
gtgaagagccaggtggtcttccacaagcctcagcaggtcacagttcgctgcgcggccgcc
aaccaggccgagcacgtcagcacgagggaggtcaagctggtgtccagcacgtggttctcc
caggtggcagtgctggctgctgttctggccttagtggtcattgttattttgtcgataatc
atcctcatcgctgtatggaggaagaaacctcgctatgaaatcagatggaaggtgatagag
tctgtgagccaggatggacatgagtacatttatgtggaccccatccatctgccctatgac
ctggcctgggagatgcccagagagaacctggtgctgggtcgcacgcttggatcaggagcg
tttggcagggtggtcgaggcaactgcgtacggtctcacgcattcccactccagcacaaag
gtggcagtgaaaatgttgaaatccacagccaggaggagtgagactcaggccctgatgtcc
gagctgaagatcatgagtcacctgggacctcacctcaacattgttaacctgctcggagcc
tgcaccaaacatggccctctctacctggttactgagtactgtcgctacggtgacctagtg
gactacctgcacaggaacaagcacaccttcctgcagtactatgctgagaagaaccaggac
agcggctgcatcatctccagaggaagtacccctgtcagccagagaaaaggttatgtgtcc
ttcggaagtgagaatgacggaggatacatggacatgagcaaagacgagccctccttctac
gtgcccatgcaggagcagctggacacaattaaatacgcagacatccagccgtccccgtat
gaatccccctaccagcaggacctctaccaggaacaaggtgggggcagaacggatctggtg
atcggcgactctcccaccctcacctacgacgatctcctgggcttcagttaccaggtcgca
aagggaatggacttcctggcctcaaagaattgtgtccatcgtgacctggcggccaggaac
gtattgatctgtgaaggcaagctggtgaagatctgcgactttggcctggccagggacatc
atgcatgattccaactacatctccaaaggcagcacattcctgcctctgaagtggatggca
ccggaaagcattttccacaatttgtacaccaccctaagcgacgtttggtcatatggcatt
cttctttgggaaattttcactctgggaggaactccttaccctgacttgcccatgaatgaa
atcttctacagtgctttgaagagaggctacaggatggccaagcctgctcacgcctctgac
gaagtgtatgagatcatgaagaagtgctgggatgagaaatttgagaagaggcccgagttc
tccctcctggtgcacaacgtggggaacatgctgacggacagctacaaaaagagatacaac
caagtgaatgaaaacttcctcaagagcgaccaccctgccgtggctcgcaccaagcctcgg
ctctcctctctatttccaattgccaacccagccttcggctctccctctccagtccctcag
tccttcccgggccgccgcagccagagcccgaggcctggagacggcgggcgagaggcagac
gcacaggaagtcatctcttcatacaacgagtacatcattcctctcccggacctaaagcct
gacgaagttttcaccgaagtgccgtcggaaagccctgcaagctctctggctgtggaggag
gaggctgactccacatctcaggacacggctgaaactcttccagaggaagaccaggtggag
aacacgagcgagagggacgcactgctgggctccatggggacgcctgaggtagaagacagt
ttcctgtag
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