Poecilia reticulata (guppy): 103471279
Help
Entry
103471279 CDS
T05149
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04010
MAPK signaling pathway
pret04020
Calcium signaling pathway
pret04510
Focal adhesion
pret04540
Gap junction
pret04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
103471279 (pdgfrb)
04020 Calcium signaling pathway
103471279 (pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103471279 (pdgfrb)
04540 Gap junction
103471279 (pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
103471279 (pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pret01001
]
103471279 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pret04090
]
103471279 (pdgfrb)
Enzymes [BR:
pret01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
103471279 (pdgfrb)
Protein kinases [BR:
pret01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
103471279 (pdgfrb)
CD molecules [BR:
pret04090
]
Proteins
103471279 (pdgfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
RIFIN
Adeno_E3_CR1
DUF3619
Motif
Other DBs
NCBI-GeneID:
103471279
NCBI-ProteinID:
XP_008418392
LinkDB
All DBs
Position
LG10:25459267..25493204
Genome browser
AA seq
1102 aa
AA seq
DB search
MRRLTASVLHLMVTLTALVRFCPEVHSLEIIPDDKEFVLAQGSSLTLTCSGSSQAKWALK
RDDSTYYLNQLDESMNSRYKMFEPDATSVALNLTSVSWMHTGVYQCVDDNADEIKEVAVF
VPDPEVWFVKSIHGMVTKTSEESVVPCVATNPNITVILYEGDTNRPIKGHYVPSEGYRAR
LEDRAYVCRGELNGEVKESQEFNVISIAVAEDINPYINSSKTVLKQGEPLTINCTVHGVE
LVYFSWNIPHTVVVQVKPETHFFPKMHSCLTFPRTTVEHSGNYVCHVQEEVVGVTASSSI
NITVLEHGFVEVKPAQRQNISAKLQENVELRVDIEAYPPPQVRWTKDGTTIRGDKAITIR
PDHEIRYVTILSLVRVRTEQNGLYTVIISNGDDQKEVLFDLEVQVPAQIKDLTDHHHPGM
RDEVTCVAEGFPAPIIQWYSCNSMLKCSNRTAAWQPLQPQPEVVSIQTNVSYNQARKVSV
VKSQVVFHKPQQVTVRCAAANQAEHVSTREVKLVSSTWFSQVAVLAAVLALVVIVILSII
ILIAVWRKKPRYEIRWKVIESVSQDGHEYIYVDPIHLPYDLAWEMPRENLVLGRTLGSGA
FGRVVEATAYGLTHSHSSTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLLGA
CTKHGPLYLVTEYCRYGDLVDYLHRNKHTFLQYYAEKNQDSGCIISRGSTPVSQRKGYVS
FGSENDGGYMDMSKDEPSFYVPMQEQLDTIKYADIQPSPYESPYQQDLYQEQGGGRTDLV
IGDSPTLTYDDLLGFSYQVAKGMDFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDI
MHDSNYISKGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPMNE
IFYSALKRGYRMAKPAHASDEVYEIMKKCWDEKFEKRPEFSLLVHNVGNMLTDSYKKRYN
QVNENFLKSDHPAVARTKPRLSSLFPIANPAFGSPSPVPQSFPGRRSQSPRPGDGGREAD
AQEVISSYNEYIIPLPDLKPDEVFTEVPSESPASSLAVEEEADSTSQDTAETLPEEDQVE
NTSERDALLGSMGTPEVEDSFL
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggctgacagcatctgtgctccacctgatggtcactttaacagctttggtgcgt
ttctgcccagaagtgcacagcctggagatcatccctgatgacaaagagtttgtcctggct
caaggttcgtctctcaccctaacatgctccggctccagccaggcaaagtgggcgcttaag
agggacgattcaacgtactacctgaatcagttagatgagagtatgaactcgagatacaag
atgtttgaacctgatgccacgtcggttgctctgaacctaacaagtgtgagttggatgcat
actggcgtgtatcagtgcgttgatgataatgccgacgagataaaggaagtggcagttttt
gtcccagatcctgaagtttggtttgtaaagagcatccacggcatggtgacgaagaccagt
gaggaaagcgtcgtcccctgtgtggccaccaacccaaacatcactgtcatcctgtatgag
ggggacaccaacaggcccattaaagggcattacgtacccagtgaggggtacagggcgcgg
ctggaggacagagcgtatgtgtgccgtggagagctgaacggggaggtcaaagagtctcag
gagtttaacgtcatcagcattgcagtggccgaggacatcaacccttacatcaacagttca
aagacggtcctgaagcagggcgagccgctgactataaactgcacggtgcacggagtggag
ctggtgtatttttcttggaatattccacacaccgtggttgttcaggttaaaccagaaacg
catttcttcccgaagatgcactcctgcctgaccttccctcgcactacggtggagcacagt
ggaaactacgtgtgccacgtccaagaagaggtcgtgggcgtcacagcttcttcaagcatc
aacatcaccgtgcttgaacacggttttgtggaggtgaaacctgctcagcggcaaaacatt
tcagccaagcttcaggagaacgtggagctgagagtggacatcgaggcctaccctccccct
caggttcgctggaccaaagacgggaccaccatcaggggagacaaagctatcaccatcaga
ccggatcatgaaataaggtatgtgaccattctcagcctggtgagggtgaggacggagcag
aatggcctctacacggtcatcatttccaatggagacgaccaaaaggaagttctctttgac
ttggaagtccaagttcctgctcagattaaagacctgaccgaccaccatcacccgggaatg
agagacgaggtgacctgcgtcgctgaagggtttccagctcccatcatacagtggtacagc
tgtaacagcatgctcaagtgtagcaaccgcacagcagcgtggcagccgctgcagccgcag
ccggaggtggtgagcatccaaaccaatgtcagctacaaccaggcgcgtaaagtcagcgtg
gtgaagagccaggtggtcttccacaagcctcagcaggtcacagttcgctgcgcggccgcc
aaccaggccgagcacgtcagcacgagggaggtcaagctggtgtccagcacgtggttctcc
caggtggcagtgctggctgctgttctggccttagtggtcattgttattttgtcgataatc
atcctcatcgctgtatggaggaagaaacctcgctatgaaatcagatggaaggtgatagag
tctgtgagccaggatggacatgagtacatttatgtggaccccatccatctgccctatgac
ctggcctgggagatgcccagagagaacctggtgctgggtcgcacgcttggatcaggagcg
tttggcagggtggtcgaggcaactgcgtacggtctcacgcattcccactccagcacaaag
gtggcagtgaaaatgttgaaatccacagccaggaggagtgagactcaggccctgatgtcc
gagctgaagatcatgagtcacctgggacctcacctcaacattgttaacctgctcggagcc
tgcaccaaacatggccctctctacctggttactgagtactgtcgctacggtgacctagtg
gactacctgcacaggaacaagcacaccttcctgcagtactatgctgagaagaaccaggac
agcggctgcatcatctccagaggaagtacccctgtcagccagagaaaaggttatgtgtcc
ttcggaagtgagaatgacggaggatacatggacatgagcaaagacgagccctccttctac
gtgcccatgcaggagcagctggacacaattaaatacgcagacatccagccgtccccgtat
gaatccccctaccagcaggacctctaccaggaacaaggtgggggcagaacggatctggtg
atcggcgactctcccaccctcacctacgacgatctcctgggcttcagttaccaggtcgca
aagggaatggacttcctggcctcaaagaattgtgtccatcgtgacctggcggccaggaac
gtattgatctgtgaaggcaagctggtgaagatctgcgactttggcctggccagggacatc
atgcatgattccaactacatctccaaaggcagcacattcctgcctctgaagtggatggca
ccggaaagcattttccacaatttgtacaccaccctaagcgacgtttggtcatatggcatt
cttctttgggaaattttcactctgggaggaactccttaccctgacttgcccatgaatgaa
atcttctacagtgctttgaagagaggctacaggatggccaagcctgctcacgcctctgac
gaagtgtatgagatcatgaagaagtgctgggatgagaaatttgagaagaggcccgagttc
tccctcctggtgcacaacgtggggaacatgctgacggacagctacaaaaagagatacaac
caagtgaatgaaaacttcctcaagagcgaccaccctgccgtggctcgcaccaagcctcgg
ctctcctctctatttccaattgccaacccagccttcggctctccctctccagtccctcag
tccttcccgggccgccgcagccagagcccgaggcctggagacggcgggcgagaggcagac
gcacaggaagtcatctcttcatacaacgagtacatcattcctctcccggacctaaagcct
gacgaagttttcaccgaagtgccgtcggaaagccctgcaagctctctggctgtggaggag
gaggctgactccacatctcaggacacggctgaaactcttccagaggaagaccaggtggag
aacacgagcgagagggacgcactgctgggctccatggggacgcctgaggtagaagacagt
ttcctgtag
DBGET
integrated database retrieval system