Poecilia reticulata (guppy): 103471745
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Entry
103471745 CDS
T05149
Symbol
kdm2a
Name
(RefSeq) lysine-specific demethylase 2A
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
103471745 (kdm2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pret03000
]
103471745 (kdm2a)
04121 Ubiquitin system [BR:
pret04121
]
103471745 (kdm2a)
03036 Chromosome and associated proteins [BR:
pret03036
]
103471745 (kdm2a)
Enzymes [BR:
pret01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
103471745 (kdm2a)
Transcription factors [BR:
pret03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
103471745 (kdm2a)
Ubiquitin system [BR:
pret04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
103471745 (kdm2a)
Chromosome and associated proteins [BR:
pret03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
103471745 (kdm2a)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
103471745 (kdm2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
LRR_6
LRR_4
C1_1
JmjC
Cupin_8
Motif
Other DBs
NCBI-GeneID:
103471745
NCBI-ProteinID:
XP_017162516
LinkDB
All DBs
Position
LG10:complement(23154065..23170667)
Genome browser
AA seq
932 aa
AA seq
DB search
MEDPHTRYSKRLRTAPRRQYQDDGISDDEIEGKRTFDLDEKLQCERFGSDLVKHMEGKDF
TYEYIQREGLRDPIIFKTTDGLGIQMPDPDFSVSDVKLFVGSRRIVDVMDVNTQKGIEMS
MAQWRRYYETPPSEREKLYNVISLEFSHTRLENLVKRPASVDLIDWVDNMWPRHLKERQR
DSTNAIIDMHYPKVQKYCLMSVQGCFTDFHIDFGGTSVWYHILRGAKVFWLIPPTPQNLD
MYENWSWDMCLDKRLWARIDLSIKRTVTPQALTGIIKRQPVTLDLSWTNISKKQLNWLIG
RLPALCSTGCPLLRSLDLRNAYGVKDAQIRELVIPPGCDNRSQLRSMQCLRLAGLDISDP
TLRLVIRHMPHLTKLDLSHCNSLTDHSINLLTAVGSSTRNTLTELNLGGCSKLTDACLKY
LRRLSCISLLDLRGCKGVARKACEAFISELSVNTLYCLSDEKLIQRISYTYPFYYEMCWY
VIERYLFCLTNISHLTPEFQKYSLGIGLTRADVGNNDPPINGTNEVDGEVEEKPEVEEIK
EEEGDEELENKVGTTRPVLTPFELEGLWNLLGKLEELPAHKKCVPAGIRNAAALLEDMRA
VLRERAGDDIKLSCTGEPIVKWPERPSWYQPPTPPAPVIYRPRLGPSLHKSKRSTKHTSI
SALRRRRVRCKRCSACCRKECGDCQYCLDMRKFGGPGRMKKSCVMRQCLMPALPNTARCA
VCGEGEFDESDPSTYSLMECTACSQIVHRQCVKEPGEGKINKDLPSCWECPKCYQGNDSD
SESSSEEESEDSEGSTFMPQSKRPYQDDVCEEGPSQGKQSRLHGRQTAPPPSQKLLLQHQ
QSRKRESALEHRLKKRIKMERSKLLRKQASLDRSPRFLSSRMISRLHSPVNRLSQGQIRG
SAWATGSSHSSILGGNGSFGQQKSSHGLVLHS
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcctcacacacggtacagcaaacgactgcggacggctcctcgcaggcagtac
caggatgatggaatctcagatgatgagatcgaaggcaaacgaacctttgacctggatgag
aagctgcagtgtgagaggtttggcagtgatctcgtcaaacacatggagggtaaagatttt
acatatgaatatatacagagagaagggctcagggaccccattatttttaagacaaccgat
gggctcggtatacaaatgccagacccagatttcagtgtgagtgatgtcaagttatttgtc
ggcagtcgacggattgtagatgttatggacgtgaatacccaaaagggaattgagatgtct
atggctcagtggcgacgctactacgagacgccrccatcggaaagagagaaactctacaat
gtgatcagcctggaattcagccacaccaggctggagaacctggtcaaacgaccagcatca
gtggaccttattgactgggtggacaacatgtggcctcgtcatctgaaggagagacagaga
gactccactaatgccattatagacatgcattatcccaaagtacagaagtactgtctcatg
agtgtgcagggctgcttcacagacttccacattgactttgggggaacttcagtctggtac
cacattctgcgaggggcaaaggtgttttggttgattccaccaacgcctcagaacctggac
atgtatgagaactggtcgtgggacatgtgtttagataaaaggctctgggcccgaattgac
ctgagcatcaagcgcactgtgacccctcaggccctcacaggcatcataaagagacaaccc
gtcacactcgacctctcctggacgaacatctccaaaaaacagctcaactggctgattggc
cgcctgcctgctctctgctccaccggctgtcccctccttcgctctctggacctgcgaaac
gcrtacggcgtcaaagacgcacagatcagggaattggtcatacctccaggctgtgacaac
cgcagccagctgaggagcatgcagtgcttgcggcttgcaggtctggacatcagcgacccc
actctgcggctggtgatccgccacatgccccatttaactaaactggatctgtcccactgc
aacagcctcaccgaccactccatcaacctgctgaccgcggtcggctcgtccacccggaac
acgctgaccgagctcaacctaggaggctgcagcaaactgacagacgcgtgtttgaaatac
ctgcgccgcctgtcgtgcatctctctgctcgacctgcgaggctgcaaaggagtcgccaga
aaggcctgcgaggccttcatctctgagctgtcggtcaacacactctactgcctatcagat
gagaaactgatccagcggatatcctatacntacccgttttactatgagatgtgctggtac
gtcatagagagatacctcttctgtctgaccaacatctcccacctcaccccggagttccag
aaatattcgcttggcattggactgactcgagcagatgtcggaaataacgatccccccatt
aacggcaccaacgaggtcgacggtgaggttgaagaaaagccrgaggtrgaagagatcaag
gaagaagagggcgatgaagagcttgaaaacaaagtaggaacgactcggcctgtgctgacg
cctttcgaactggagggactgtggaaccttttagggaagctggaggagctgccagcccat
aaaaagtgcgtccctgcaggaatcagaaatgctgcagcgctgctggaggacatgagggct
gttctaagggagcgtgccggtgacgacatcaaactatcctgcactggagagccgatcgtc
aagtggcctgaaaggccgtcatggtaccagccscccacgccaccagcacctgttatttat
cgtccccgcctgggtccgtctctgcacaaatctaagcggtctaccaaacacacttccatt
tcggcgctgcggcgcaggcgggtgagatgcaagcgatgctccgcctgctgcaggaaggag
tgcggggactgccagtactgtctcgacatgagaaaatttggtggtcctggacgcatgaaa
aagagctgcgttatgaggcaatgtctaatgcctgctttgccaaacacagcccgatgtgcc
gtttgtggagaaggagagtttgacgaatcagatcccagtacgtactctttaatggagtgc
accgcatgctcgcagatcgtacatcgtcagtgtgttaaggaacccggtgaggggaagatc
aacaaggacctgcccagctgctgggagtgtcccaaatgttaccaagggaatgactctgac
tcagagtcttccagtgaggaggagagtgaggactcggagggctccacattcatgccacag
tctaaacgtccgtatcaggatgacgtttgcgaggaaggtccgagtcaagggaagcaaagc
cgactgcacggccgacaaacggcgccgcctccctcccaaaagctgctgctacagcatcaa
cagagtcgcaaacgagagagtgcactggagcacagacttaagaaaaggataaaaatggag
aggagcaaacttttaagaaaacaggcgtctttagatcgctctccccggttcctgagctcc
aggatgatttctcgcttgcactctccagtcaacagactgtctcagggccaaatccggggc
tccgcttgggcaactggttcgtctcacagcagcattctgggaggtaatggatcgtttggg
cagcagaagtcctcccacggcctggtgcttcattcc
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