KEGG   Poecilia reticulata (guppy): 103473320
Entry
103473320         CDS       T05149                                 
Name
(RefSeq) TNF receptor-associated factor 2-like
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
pret  Poecilia reticulata (guppy)
Pathway
pret04010  MAPK signaling pathway
pret04137  Mitophagy - animal
pret04141  Protein processing in endoplasmic reticulum
pret04210  Apoptosis
pret04217  Necroptosis
pret04621  NOD-like receptor signaling pathway
pret04622  RIG-I-like receptor signaling pathway
pret04920  Adipocytokine signaling pathway
pret05132  Salmonella infection
pret05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:pret00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    103473320
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    103473320
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    103473320
  09143 Cell growth and death
   04210 Apoptosis
    103473320
   04217 Necroptosis
    103473320
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    103473320
   04622 RIG-I-like receptor signaling pathway
    103473320
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    103473320
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    103473320
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    103473320
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pret03019]
    103473320
   04121 Ubiquitin system [BR:pret04121]
    103473320
Enzymes [BR:pret01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     103473320
Messenger RNA biogenesis [BR:pret03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     103473320
Ubiquitin system [BR:pret04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    103473320
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf TRAF3_RING zf-C3HC4_2 zf-C3HC4 zf-C3HC4_4
Other DBs
NCBI-GeneID: 103473320
NCBI-ProteinID: XP_008421673
LinkDB
Position
LG12:5081207..5094018
AA seq 596 aa
MATQEPSPPSSMESNKPGFPKKILGNKLEDKHLCNCCHNILRRPFQAQCGHRFCSYCFNR
TVSNGPQRCNACIKEDIFEEPTSVLKQGCAFPDNAVRREVESLSAVCINEDCTWEGTIKE
YELNHEGKCEFMIIPCLSCKERIRFNEQERHNERECPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKLCTKFRTPCRFHVVGCDMSVEKEKIHDHERAYA
YEHLNLLLHFIMGMKVSMEGLQPQGLEVAGHKLLELQQSLRELEARVSQLSTTSSGPPVQ
GAAASSSSSSICSAGPPASAPLPPPPTLPPTLSVSTSFTPLPSSVGAALELQLHSEKTKV
AELGRRCMDLEVKAGTFENVVCVLNREVERFATTMEASNRQHKLDQDKIEALSNKVRQLE
RTVGLKDLTVVEMEGRLREMSATTFDGVFIWRISDFAKKRQDAIAGRAPAMFSPAFYTSK
YGYKMCLRIYLNGDGTGRGSHLSLFFVVMRGLNDALLKWPFNQKVTLMLLDQSNREHIID
AFRPDVTSSSFQRPVSEMNIASGCPLFCPLSKLDGKNSYIRDDTIFIKAIVDLTGL
NT seq 1791 nt   +upstreamnt  +downstreamnt
atggccacacaggagccgtcccctccgtcatccatggagagcaataaacccggcttcccc
aagaagatcctgggcaacaagctggaggacaagcacctgtgcaactgctgccacaacatc
ctgaggcggccatttcaagcccagtgtggacatcgcttctgctcctactgcttcaacagg
accgtgagtaatggaccccaaagatgcaacgcttgcattaaagaagatatttttgaggag
ccgacatcagttttgaagcagggatgtgcatttcctgacaatgccgttcgaagggaagtt
gaaagcctgtctgcagtttgtatcaatgaggactgtacttgggaaggaactattaaagag
tatgagctgaatcacgaggggaagtgcgagttcatgatcatcccctgcctctcctgcaaa
gaacgaatccgcttcaacgaacaggagcgccacaacgagcgggagtgcccggagaggacg
ctcaactgcaagtactgcaaggagccatttcacttcaaaaacatcaaggctcatgacgaa
atctgccccaagtatccgatgatctgtgaaggttgtgccaagaagaaaatacccagagag
aagtatgtggaccacattaagctctgcactaaattccgaactccatgtcgatttcatgtc
gttggatgtgacatgtctgtggagaaagagaagattcatgaccacgaacgcgcttatgcc
tacgagcaccttaacctgctcctgcacttcattatgggtatgaaggtgagcatggagggc
ctgcagccccagggactggaagtagctggacacaaactgttagaactccaacaatccctc
agggaactcgaggccagagtctcccagctcagcaccacctcttctgggcctcccgtgcag
ggagctgccgcttcctcctcttcctcctccatctgcagtgccggcccgcctgcatcagct
cctcttcctccacctcccactcttcctccaacgctctctgtgtctacctcgttcacaccc
ctgcccagctcggtgggcgcagcgctggagcttcagctccacagcgagaagaccaaggtg
gccgagcttggccgcagatgcatggacctcgaggtcaaggcggggacgtttgaaaatgtg
gtgtgcgttcttaacagggaggtggagaggtttgccacaaccatggaggccagcaaccgg
cagcataaactggaccaagacaagatcgaagctcttagtaataaggtacgacagctggag
aggaccgtcggactgaaggacctcacggtggtggagatggagggccgcctgagggaaatg
tccgccaccacctttgatggcgtcttcatctggaggatatcagactttgccaaaaaacga
caagatgccattgcaggtcgggctcctgccatgttctcaccagctttctatactagcaag
tatggctataagatgtgcctgaggatctatctgaatggggacggtacggggcgaggcagc
cacctgtccctgttctttgtggtgatgaggggactgaacgacgctctgctcaaatggccg
ttcaaccagaaggtaaccctgatgctactggaccagagcaatagggagcacatcatcgac
gcctttcgacccgacgtcacttcctcttcctttcaacgacccgtgagcgagatgaacatc
gccagcggctgcccgctcttctgcccgctctccaagcttgacggaaagaactcgtacatt
cgcgacgacacaatattcatcaaagccattgtggacctcaccggcctctag

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