KEGG   Poecilia reticulata (guppy): 103475327
Entry
103475327         CDS       T05149                                 
Symbol
rapgef6
Name
(RefSeq) rap guanine nucleotide exchange factor 6 isoform X1
  KO
K08020  Rap guanine nucleotide exchange factor 6
Organism
pret  Poecilia reticulata (guppy)
Pathway
pret04517  IgSF CAM signaling
pret04530  Tight junction
Brite
KEGG Orthology (KO) [BR:pret00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    103475327 (rapgef6)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    103475327 (rapgef6)
SSDB
Motif
Pfam: RasGEF PDZ RasGEF_N RA PDZ_6 cNMP_binding RA_2 PDZ_2
Other DBs
NCBI-GeneID: 103475327
NCBI-ProteinID: XP_008425070
LinkDB
Position
14:complement(1625847..1773659)
AA seq 1703 aa
MSVLRWHRLSALWRNWMFNQEPAEEQGQIPEAPGDEEEPQQKERSKFTDSSPDCLNLTGA
DTQDSEFEEQSLDFINQNVVPKVRRSELLKRSCSEPCSQPSNHVDRSNSCGYVAEGCDLT
LQVDNGTEGDDSFLQRDGSQRRSRRRFRRVNPKGERELITDGQEPASYNNTDYVNNKLPA
DLNKMHLTDHAHQQVMHMAPSQSGCSITSDSGSSSLSDIYQATESDLGDVDLSGLPEAPV
DSEEEEEEDEDLERASDGLLGRDLVRECLEKDPADRNDDDIEQLLEFLHQLPAFANMTMS
VRRELCSVMVFEVVEQSGTVILHNKQELDHWYVILNGAVEISRAESRTETLCMGNSFGIS
PSLDKQYMNGEVRTKGDDCQFVCIAQEDYWRILNHVEKNTHKVEEEGEIVMVKEHRELDR
SGTRKGHIVIKGTPERLIMHLVEEPSVVDPTYIEDFLLTYRTFLSSPMDVGRKLLDWFQV
DCYRDTVTRIVLLWVNNHFNDFEGDSAMTRFLEEFEKRLETSKMKGHLRLLNIACAAKAK
WRQITLQKASRESQLHFSVQGGSERGFGVFVESVEEGSKAAETGLKRGDQIMEVNGQNFE
NIGLSKAVDILRNNTHLSLTVKTNIFVFKELLSRIMHEKKNGGPHIPKIQEKKGNRFSIA
DFSGDIEFPTDSKSTRKMKANTVSGGRNKIRKMLEKTRFSILPPKPFRGLFGDGGLGQSQ
DDSIVGTKQCRHSVAIMPIPGNLSSSSPDLLQPATSILDFSNPAALGLYYIPDQVIRVFK
ADQQSCYIIISKDTTAKDVVTHTVNEFSLPAPPDTYSLCEVSVSPEGVIKQRRLPDQLSK
LADRIQLNGRYYLKNNMETETLCSDDDAQDLLRESQISLLQLSTMEVAAQLSMRDFELFR
NIESTEYVEDLFKLDLSAGCTNLKQFEEVINQETFWVATEILKEPNTLKRMKTIKHFIKI
ALHCRECKNFNSMFAIISGLNLAPVARLRSSWEKLPSKYEKLFEDLQDVFDPSRNMAKYR
NVLSSQSMQPPIIPLFPVVKKDLTFLHEGNDSNVDGLVNFEKLRMIAKEIRHVVRMTSAN
MDPALMFRQRKKRWKSLGSLSQGSTNSNILDVQGGAHKKRVRRSSLLNAKKLYEDAQMAR
KVKQYLSNLTVETDEDKHQIMSLQCEPSYNTLGKNLSERRANKSDMSPVSLRATLPSGKT
QNRVSQVLQVQVPLNPLRKKSTAKDFGTSNSNSPQVVKKPSANSSDEWSAKRPSDDTVSI
VSSLHSSPTVSPQGSPRKVGGAAKSQNSSQMNLSGSSSSLTSDASTKTGTISLRSYGIGC
PLLPSAKSDNLSDSSHSEISSRSSICSVDSAQASGPDDRCNRAGSGTAATVAVNATAATA
AVVAEGTAALNAHLTADYSQPSTSSSVVARGGHAARPFTSSLSTEELTPDHASLSLDSVV
DSGRGSWTSCSSNSHESFQILPASSCRPWDHGIHGHPLSLPHTHLSGFKLPPLGRTMAEA
DAARPSWAGDTAAGRLARDSSSDLSVAARESRTSSGSLSDNYEGNYGTIKRRNASELPSS
PANEEGGQSADASYKTVTSSTEKGLIVYCVTSPTKDERYRAPPPTPPGYQGLALGDLGVA
DGVGGGPGSPAPRPPHLRPPDYSVALQRSKLLQSPGAASGLAEARRLHLRTASPIQGQSR
PPSVVPPAQDLADSEDDEQVSAV
NT seq 5112 nt   +upstreamnt  +downstreamnt
atgagtgtgctgcgctggcaccggctctctgcgctctggaggaactggatgttcaaccag
gagcctgcagaagagcagggccagattcccgaagctccgggagacgaagaggaaccgcag
cagaaagaacgcagcaagttcacagattccagcccggattgtttgaatctgacgggagct
gacacccaagactcggaattcgaggaacagagtctggattttataaatcagaatgttgtt
ccaaaggtccggaggtctgaactgctgaagcggagctgctccgagccgtgctctcagccg
tcgaaccacgtggatcggtcaaacagctgtggctacgtggctgagggctgtgaccttacg
ttacaggtggataacggcaccgagggggatgacagcttcctgcagagagacgggtcccag
cggcgctccaggcggcgcttcaggagggtcaacccgaaaggagagcgggaactcatcact
gatggccaagaacccgccagctacaacaacacggattatgtcaacaacaagcttcctgcc
gatctcaataagatgcacctgacggaccacgcccaccagcaggtgatgcacatggcgccc
agccaatcagggtgcagcatcaccagcgactcgggcagcagcagcttgtcggacatttac
caggccacagagagcgacctgggagacgtggatctgtctggactgccagaggctccagtg
gacagcgaggaagaggaggaggaggatgaagacctggagagagcgtcagacggactcctg
ggccgggacctggtccgagagtgtctggaaaaagacccagccgaccgcaacgacgacgac
atcgaacaactgctggagtttctgcaccagctgcctgcgttcgccaacatgaccatgtcc
gtacggcgagagttgtgcagcgtcatggtgtttgaggtggtggagcaatctggcacggtc
atcctgcacaacaaacaagagctcgaccactggtatgtgatcttgaacggagccgtggag
atcagccgtgcagaaagccgaacagagactctttgtatggggaacagctttggcatctcg
ccctcactggataagcagtacatgaacggagaagttcgcaccaaaggagatgactgccag
ttcgtctgcatcgcccaggaggattactggcgcatcctcaaccacgtggagaaaaacacg
cacaaggtggaggaggagggggagatcgtgatggtgaaggagcaccgcgagctggaccgc
agcggcaccagaaagggtcacatcgtcatcaagggaactccagagcgtctgatcatgcac
ctggtggaagagccgtcggtggtggaccccacctacatcgaggacttcctgctgacctac
aggaccttcctgtccagtcccatggacgttggcaggaaactgctggactggttccaggtg
gactgctaccgggacacggtgacgagaatagtgctgctttgggtcaacaaccacttcaac
gactttgagggcgactcggccatgacgcgcttcctggaggaatttgagaaacgtctagaa
acatcaaaaatgaagggtcatctgaggttgctgaacattgcatgcgcagccaaggccaag
tggaggcagatcacgctgcagaaggcgtccagagagtcgcagctgcatttcagcgtgcaa
ggaggcagcgagagaggattcggcgtctttgtggagtcggtggaagaaggaagcaaagcg
gcagagaccggactcaagcggggggatcagatcatggaggttaatggtcagaactttgag
aacatcggcttgtccaaagccgtggacatcctgagaaataacacacacctttccctcact
gtgaaaaccaacatctttgtgttcaaagagctgctgagcaggatcatgcacgaaaagaaa
aacggtggccctcacattcctaagatccaggagaaaaagggcaaccgtttctccatcgcc
gacttctccggagacatcgagttccccacggacagcaaaagcacccggaagatgaaagcg
aacaccgtgtcggggggacgcaacaagatcaggaagatgctggagaaaacgcgcttcagc
atactaccgcccaaaccattcaggggcctgtttggtgacggcggcctgggtcagagtcag
gatgacagcatcgtgggcaccaaacagtgccgtcacagcgtcgccatcatgcccattcct
ggaaacctgtcgtcaagcagccctgacctgctgcagccggccaccagcatactcgacttc
tccaaccccgccgctcttggattgtactacatcccagaccaggtaatccgcgtgttcaag
gcagaccagcagagctgctacatcatcatcagcaaggacacgacggccaaggacgtcgtc
acacacaccgtcaacgagttcagcctcccggcgccgccggacacctactccctgtgcgag
gtgtccgtcagcccagagggggtcatcaagcagcgccggcttcccgaccagctctccaaa
ctggccgaccggattcagctgaacggcagatattacctgaagaacaacatggagacggag
acgttgtgttcagatgacgacgctcaggatctcctcagagagagtcagatctccctgctg
cagctcagcaccatggaggtcgccgcccagctgtcgatgagagactttgaactcttcaga
aacatcgagtccacagaatatgtggaggacttgttcaagctggacctgtctgctgggtgt
acaaacctgaaacagtttgaggaggtgataaaccaggagaccttctgggtggctactgag
atcctgaaagagccaaacaccctgaagaggatgaagaccatcaagcacttcatcaagatc
gctctgcactgcagagagtgcaagaacttcaactctatgttcgccatcatcagcgggctg
aacttggcaccggtggctcggctgcgaagctcctgggagaaattgcccagtaagtatgag
aagctctttgaagacctgcaggacgtcttcgacccgtccaggaacatggccaagtaccgc
aacgtgctgagcagccaaagcatgcagccgcccatcatcccgctgtttcctgtggtcaag
aaggacctcaccttcctgcacgaaggcaacgactccaacgttgacggccttgtgaacttt
gagaagctgcggatgatcgcgaaggagatcagacatgtggtgcggatgacctcggccaac
atggaccccgccctcatgttcagacagaggaagaagaggtggaagagtttagggtctctg
agtcaaggcagcaccaactccaacatcctggacgttcagggtggagcccataagaagcgc
gtgcgccgcagctccctcctgaacgccaagaagctttacgaagacgcccagatggccagg
aaggtgaagcagtacctgtccaacctgacggtggagacggatgaggacaaacaccaaatc
atgtccctgcagtgtgagccgtcttacaacacattgggtaaaaacctgagcgagcggcgg
gcgaacaagtcggacatgtctccggtgtccctcagggcgacgctaccctcagggaaaact
cagaacagggtgtcacaagtcctgcaggtccaggtgcctctgaaccctctgaggaagaag
agcaccgccaaggacttcggcacctccaactcaaattctccgcaggtggtgaagaaacct
tcagcgaactcgtcggatgagtggagcgccaagaggccgtctgatgacaccgtttccatc
gtgtcgtcgctccactccagccccacagtgtcgcctcagggctcgccacgcaaagtgggc
ggcgccgcaaaatcacagaactccagccagatgaacttatcgggatcctcgtcgtcgctg
accagcgacgccagtacaaagacgggcaccatcagtctgcgcagctacggcataggttgt
cccctcctcccttctgccaaatcggacaacctgtcggactccagtcacagcgagatctcg
tcccgctccagtatctgctccgtggactcggcgcaggcctccggaccggacgaccgctgt
aaccgggccggttccggtacggctgccaccgttgctgtcaatgctacggccgcgacggct
gctgtggtcgctgagggcacagcggcattaaatgcacacttaactgctgattacagccag
cccagcacaagctcttcagtcgtggctcgaggaggacatgcagcgcgacctttcacctcc
tccctctccacggaggagctgaccccggaccacgcctccctgtccctggactcggtggtg
gacagcggtcgcggcagctggacttcctgttcctccaactctcacgaatccttccaaatc
ctccccgcctcgtcctgccggccctgggaccacggcatccacggccacccgctctccctc
ccccacacgcacctgagcggcttcaaactcccgccgctgggccggacgatggccgaggcg
gacgccgccaggccctcgtgggccggcgacaccgccgccggccgcctcgccagagactcc
agctcagatctgagcgttgcggcgcgggagagccggacgtcgtcgggctccctgtcggat
aactacgaggggaattacggaacgataaagcggcgaaacgcctcggagcttccttcctcg
ccggccaacgaggaaggagggcaaagcgcagacgcctcgtacaaaacggtgacgtcgagc
acagagaagggcctgatagtgtactgtgtcacgtcccccactaaggatgagcgttaccga
gctccccctcccacccctccaggctaccagggtctggctctgggcgacctcggggtcgca
gacggagtaggcggcgggccggggtctcccgccccccgacctcctcacctcagacctcca
gactacagcgtggccttgcagaggagcaagctcctgcagagccccggcgcggccagcggg
ctggccgaggcgcggaggcttcacctccgaacggccagccccattcagggccagtccaga
ccgcccagcgtcgtccccccagcgcaggacctggctgacagcgaggacgatgaacaggtg
tcggcggtgtga

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