Poecilia reticulata (guppy): 103476918
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Entry
103476918 CDS
T05149
Symbol
slit1
Name
(RefSeq) slit homolog 1 protein isoform X1
KO
K06838
slit 1
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
103476918 (slit1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pret00536
]
103476918 (slit1)
Glycosaminoglycan binding proteins [BR:
pret00536
]
Heparan sulfate / Heparin
Axon guidance molecules
103476918 (slit1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
EGF
Laminin_G_2
Laminin_G_1
hEGF
LRRNT
LRR_1
LRRCT
EGF_TEN
LRR_9
LRR_14
EGF_Teneurin
LRR_EndoS
EGF_DL_JAG
EGF_3
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
103476918
NCBI-ProteinID:
XP_008427880
LinkDB
All DBs
Position
LG15:complement(16855252..16951427)
Genome browser
AA seq
1544 aa
AA seq
DB search
MPVGGFESSMGRLPRQWMWLLMLAALMVGNASACPALCTCSGTTVDCHGLGLKTMPRSIP
RNTERLELNGNNLTRITKSDFAGLKYLRVLQLMENQITVIERGAFDDMKELERLRLNRNQ
LQQLPELLFQKNPGLSRLDLSENFIQSIPRKAFRGATDIKNLQLDKNHISCVEDGAFRAL
RGLEVLTLNNNNISSIPVSSFNHMPKLRTFRLHSNNLNCDCHLAWLSQWLRQRPTIGLFT
QCASPPELRGLNVAEVQKHEFTCSGHQESSSLQPCSTGGGSCPAMCTCSNNIVDCRGKGL
TAIPANLPDSMSEIRLEQNGIKSVPPGTFSPYKKLRRIDLSNNQISEIAPDAFQGLRSLN
SLVLYGNKITDLPKGVFDGLYSLQLLLLNANKIHCVRANAFQDLQNLSLLSLYDNKIQTL
AKGTFTSLRAIQTLHLAQNPFICDCNLKWLADYLRSNPIETSGARCASPRRLANKRIGQI
KSKKFRCSAKEQYVIPGTEDTHLNNVCNTDPVCPPKCRCESNVVDCSNLKLTKIPEHIPA
STAELRLNNNELTTLEATGVFKNLSQLKKINLSNNKITEIEDGAFEGASSVFELHLTANQ
IDSVRSGMFRGLEGLRMLMLRNNKISCVHNDSFTGLHNVRLLSLYDNHLTTITPGAFDTL
QTLSTLNLLANSFNCDCRLAWLGDWLRSRKIVTGNPRCQRPAFLKEIPLQDVALPDFRCE
EGQEESSCVPRPQCPSECACLETVVRCSNKHLRTLPKGIPRNVTELYLDGNQFSVVPKEL
SSFKYLQLVDLSNNIIYSLSNTSFANMSQLTTLILSYNSLRCIPKMAFSGLHSLRLLSLH
GNEISELPDGIFNDVTSLSHLAIGANPLHCDCHLRWLSDWVKTGYKEPGIARCAGPQGME
SKLLLTTPAKKFECTGDVDNSVLAKCNPCLSNPCLNHGICHNDPTEIYRCNCPPGFKGRN
CETALNGCVSSPCANGGTCQVTDEDEGEYRCSCLPGFEGPTCQINVDDCEDNDCENGATC
IDGINNYTCFCPPYYTGEMCEEMEDVCAPGRSPCQHQSTCLISTSGPKCVCSPGYVGDDC
SVNYDDCREHRCQNGAQCVDELNGYSCICPNGYSGQLCEVPPSPLSLCELADCQNNAPCV
ERGGRALCQCPPEFGGPRCEKLVSVNFVDRDSYLLLSDLKNWPQANITLQVSTAEDNGIL
LYNGDNDHIAVELFQGHVKVSYDPGSQPGHAIYSTETINDGQFHTVELVTFDQMVNLSID
GGLPTTMDSFGAVRPLNGEAPLYVGGRGPLQNTPPSSAGMPVDVHSGTFRLWQIQNGSSF
HGCIQNLYINNELQDFTKTQMKPGVVPGCEPCKKLYCVHGICQPDGLQGPVCHCQPGWSG
AHCDQPALNPCQGSKCVHGKCIPLDLQSYRCECEEGYRGALCNQQGELFNPCRRLTCKHG
RCQISDSGDAYCHCESGYTGELCDAESECRGEPVRDFYQVQRGYAICQTTRMVSWVECTG
ACDTGSCCVSQRMKRRKYTFECSDGTSFTEEVEKTIKCGCVGCM
NT seq
4635 nt
NT seq
+upstream
nt +downstream
nt
atgcccgttggaggttttgaatcaagcatgggtaggctgcccagacagtggatgtggctg
ctgatgctcgctgccctgatggtgggcaatgccagcgcctgcccggcactttgtacctgc
agcggcaccacagtggactgccacggactgggtctcaaaactatgccaaggagtattccc
cgcaacaccgaaagactggagctgaacggaaacaacctcacacgcatcaccaagagtgac
tttgctggcctgaagtacctcagagttctacagctgatggagaatcagattacagtgatc
gagcgaggggcttttgatgacatgaaggagctggagagactgcggctgaaccgtaatcaa
ctgcagcagcttccggagctgctgtttcagaagaaccctggcctgtctcggctcgatctc
agtgagaacttcatccaatctatcccccggaaagcattcagaggagctacagacatcaaa
aacctgcagctggataaaaaccacatcagctgcgtcgaggacggagccttcagagctctg
agaggcctggaagtactaacgctgaacaacaacaacatcagcagcattcctgtctccagc
ttcaaccacatgcccaaactccgaactttccgacttcactccaacaacttaaactgtgat
tgtcacctggcctggctgtcccagtggctcaggcagaggcctacaatcggcctgttcacc
cagtgtgcttcacccccagaactcagaggactcaatgtggcagaggtccagaagcacgaa
ttcacatgctcaggtcatcaggagtcttccagcctgcagccgtgcagcactgggggaggc
tcctgtcctgccatgtgtacctgcagcaacaacatcgtggactgcagagggaaaggtcta
actgctattccagccaatctgcctgacagcatgtcggaaatacgtctggagcagaacggg
atcaagtctgttcctcctggaaccttctctccctacaagaaactgcgcaggatagacctg
agcaacaaccagatctcagagatagctcctgatgcctttcagggcctgcgctctctcaat
tcccttgtgctatatggaaataagatcaccgacctgccgaagggtgtgtttgacggcctc
tactctctgcaactgctgctgctgaatgccaataagattcattgcgttcgtgccaatgcc
ttccaggatctgcaaaatctctccctgctatcgctgtacgataacaagatccaaaccctt
gccaagggcaccttcacttcacttcgagctattcaaacccttcacctggcacagaacccg
tttatttgtgactgcaatctgaagtggctcgcagactacctccgctccaacccgatcgag
accagcggcgcccgctgtgccagtccacgccgcctcgcaaacaaacgaatcggacaaatc
aagagcaagaagttccgctgctccgccaaagagcagtacgtcatcccaggtactgaagac
acccatttgaataatgtctgcaacactgatcctgtgtgtccacccaagtgtcgctgtgag
tccaatgtagtggactgctccaacctgaaactcaccaagatccccgagcacatccctgcg
tccacagctgaactccgccttaacaataatgaactaacaactcttgaggctaccggtgtg
tttaagaacctttcccaactcaagaaaattaacctgagtaacaataagatcacagagatt
gaggatggagcgtttgaaggtgcatcatccgtctttgagcttcacctcacagccaatcaa
atcgactcagttcgaagcgggatgtttcgaggcctcgagggacttcgtatgctgatgttg
aggaacaacaaaatcagttgtgttcacaacgacagtttcacagggcttcacaacgttcgt
ttgctgtctctgtacgacaaccatctgaccaccattactccgggggcctttgacacgctg
cagactctctctactctaaacctcttggccaactccttcaactgcgactgtcggttggcg
tggcttggcgattggctgaggagcagaaagattgtgacaggtaaccctcgctgccagcgc
ccggccttcttaaaggagatccccctccaggatgtagctctgccagattttcgctgtgag
gaaggccaagaggagtcgagctgtgttcctcgaccccagtgtcccagcgagtgtgcttgt
ctagagactgtggtgcgctgcagcaacaaacatctccgcacactacccaaaggcatcccc
aggaatgtgactgaactgtaccttgatggcaaccagttcagtgttgttcctaaggagctg
tcttccttcaaatacctacagctggttgacctgagcaacaacataatctactctctgagc
aacacatcctttgctaacatgagtcaactgaccactctaatcctgagctacaactctctg
cgctgtatacccaaaatggctttcagtggactgcactcactgcgactgctgtctcttcat
ggaaatgaaatctcagagcttccagatggcatattcaacgatgtgacctccctctcccat
ttggcaattggcgccaaccctctgcactgtgactgccacctgcgctggctctctgactgg
gtgaagaccggatacaaagaacccgggatcgctcggtgtgccggcccacaggggatggag
agtaaactgctcctcaccacgccggctaagaaatttgaatgcacaggtgatgtagacaac
tctgtgctggccaagtgtaatccatgcctgtccaatccctgcctgaatcacggcatctgt
cacaatgacccaacggagatatacaggtgcaactgtcctcctggattcaagggcaggaac
tgtgaaacagctctgaacggctgtgtgagtagcccatgtgccaacggaggaacctgccaa
gtgactgacgaggatgagggagagtaccgctgctcctgtctgccgggctttgagggcccg
acttgccaaatcaatgttgacgactgtgaagacaacgactgtgagaacggagcaacatgc
attgacggaatcaacaactacacttgtttttgtcccccctactacacgggggagatgtgt
gaagaaatggaagatgtgtgtgctccaggacgaagcccctgtcaacatcagtctacctgc
ctcatcagcacctctgggcccaagtgtgtgtgttctcctggttatgttggcgatgactgc
agcgtaaactacgatgactgcagggagcatcgctgtcagaacggagctcagtgtgtggat
gagttgaatggatattcgtgcatctgcccgaacggatatagcggtcagttgtgtgaagtt
cccccatctcctctgtctttgtgtgagctggcagactgccagaacaacgccccctgtgtg
gagcgaggtggccgcgctctctgccagtgtcctccagagtttgggggtccacgctgtgaa
aaactggtcagcgtcaactttgttgacagagattcttatttactactctctgacctgaag
aattggccacaagctaacatcaccctacaggtttctacggccgaggacaacggtatcctg
ctgtacaatggtgacaatgatcatattgcagtggagctcttccaaggccacgtaaaagtg
agctatgatcccggcagccagccaggacacgccatatacagtaccgagaccatcaatgat
ggtcagttccacacagtggagctggtgaccttcgaccagatggtgaacctgtccattgat
gggggtctccctaccacaatggacagctttggggcagtgcggcccctcaacggagaggca
ccactatacgtggggggtaggggccctctccagaacacacctccctcctctgcaggcatg
cctgtggatgtccactctggaactttccgtctctggcagatccagaacggttccagcttc
cacggctgcatccagaacctgtacatcaacaacgagctccaggacttcaccaagactcaa
atgaagcccggcgtggtgccgggctgtgagccctgcaagaagctctactgtgtccacggc
atctgccagcccgacgggttgcaggggcccgtgtgtcactgccagccaggttggagtggc
gcgcattgtgatcagccagctctcaacccttgccagggcagcaagtgcgtccatggaaag
tgcattcctctggacctgcagtcatatcgctgcgagtgtgaagagggctaccgaggcgcg
ttatgcaaccagcaaggagagctgttcaatccctgccgccgcctcacctgcaaacatggc
cgctgccagatctccgacagcggagacgcgtactgtcactgcgaaagcggctacacgggg
gaactctgtgatgcagagtccgaatgtcgaggtgagccggtgcgagacttctaccaggtg
cagcgaggctacgccatctgtcaaacaacccgcatggtgtcctgggtggagtgcaccgga
gcttgtgacacggggagctgctgcgtcagccagaggatgaaacgccgaaaatacaccttc
gagtgcagcgacggaacgtccttcaccgaggaggtggaaaagaccatcaagtgcggctgc
gtgggctgcatgtag
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integrated database retrieval system
