Candidatus Peribacter riflensis: PeribacterA2_0139
Help
Entry
PeribacterA2_0139 CDS
T04147
Name
(GenBank) isoleucyl-tRNA synthetase
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
prf
Candidatus Peribacter riflensis
Pathway
prf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
prf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PeribacterA2_0139
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
prf01007
]
PeribacterA2_0139
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
prf03016
]
PeribacterA2_0139
Enzymes [BR:
prf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
PeribacterA2_0139
Amino acid related enzymes [BR:
prf01007
]
Aminoacyl-tRNA synthetase
Class I (U)
PeribacterA2_0139
Transfer RNA biogenesis [BR:
prf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PeribacterA2_0139
Prokaryotic type
Other AARSs
PeribacterA2_0139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
His_Phos_1
DUF5915
Anticodon_1
tRNA-synt_1g
tRNA-synt_1e
tRNA-synt_1_2
Motif
Other DBs
NCBI-ProteinID:
ALM09534
UniProt:
A0A0S1SIR3
LinkDB
All DBs
Position
complement(137856..142265)
Genome browser
AA seq
1469 aa
AA seq
DB search
MFDPVDPKQSLPALEEGILRYWKEEDTFKRSLKQRSTGTGDLLDGPMGQKQETYSFYDGP
PFATGLPHYGHLLAGTIKDVIPRYQTMRGKYVERRFGWDCHGLPVENIIEQEKGIKSHKE
IEEMGIAAFNGLCRTAVQRYAKEWRTVVERMGRWVDMDWDYRTMDPEYMESIWWVFSELA
KKDLIYEGHKPMHICPRCVTPLSNFEVTQGYKDITDTSVTVKFELADEPGTFILAWTTTP
WTLPGNLLLAVDPHIKYVKYQYGCERYILAKKIFDQRKDPKNLLHPLLYAKAKREGEEIE
ENPESVEDISIKTLLGKRYIPLFPYFQNQKEYANAYRIVGADFVTADEGTGIVHIAPGFG
EDDYNLGKKEKLPVLQHVNMEGKFVSEVTDFAGMEVKPIADPGKTDRLVTKWLKEHGKLF
DAKPYTHSYPHCWRCDSPLLNYATSSWFVSVEKIKEDVLAANAETEWVPAHIRDGRFGKW
LEGARDWAISRNRYWGTPLPIWRCPETKDMTVIASREELTAQKKLRFTKVTALRHGESEG
NLVPVYQGKEPGTNLTAKGKEQARKAADYLNTAEVTAIYCSPLARTRQTAEAIAKKTGAP
VIVDPRLCEVCFGDYEGKTVDFSDLTFVKARRAHKLSTATPESIYHFPGMEKWSDVAQRM
RAFMEDVLPLHRGGHIVLVTHADPIQNIRHFFSNEDPVKLSHQPYPFFATPYTFYWDHEA
GKELDLHKHIVDEITWNAGSKKTDTLLTVVRHGQTDYNKQDLVNGGNIDTLLNETGREQV
HALAKKLKKRKFDVIISSDLKRAVETAEILSAELKVPHTARWKELRERDTGDWTGKPVKD
FITLLPRSITASPALHPGTPPGGESLQAFLQRLETVLEKIRAEFPGKRVLVACHSGPLRG
LQAIVDNLSFAEAAVIDPKNAETTDLALPALMHRIPEVLDCWFESGSMPYAQSHFPFDFA
QAGKGKKSPPGFPADFIAEGIDQTRGWFYTLMILSSALFKKPAFFNCIVNGIVLAEDGKK
MSKRLKNYPEPTEVVNRHGADAVRFTFMSSPAVRGEDLRFSEKLVEETVRSVLLPLWNVY
SFFVTYANAAGFEPTGSRGHSGHPLDRYLRAEVQDLVNRMTKQLDGYDLSAACAEIHETI
DALTNWYVRLSRRIFAGKGAADEEDTSPSAELSEHDAEQAAALGTLYDALLTLCQTLAPF
CPFLTEAIYLNLVPEAHTSIHLSDWPEPRALTAEEWELLKRNRLMRHIVSLGHAIRSGKK
IKVRQPLARATVALPPSLAALRLTEEDRDLLKNELNVKDLEFTDDPGTLACRIAQVDARK
VGPRLGARVQEIIRAGKSGAFTVKEDGSVLILDEVLAPDEVAIVYRGKEGQDAAVDQGIV
VCMETAITEELKREGLARDVIRAVQKLRKEAGLHFTDRIALSMDGLADVQKEHGAAIAQE
TNALWEQNDGEAQSVTIDGTDVTVRLQKR
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatcccgttgatccgaaacaatccctgccggcccttgaggaaggcatcctccgc
tactggaaagaggaagacaccttcaagcgcagcctcaaacaacgctccaccggcacgggt
gacctgctggatggaccgatgggccagaaacaggagacctacagtttctacgacggaccc
ccgttcgccacggggctcccccactacggccacctgctggcgggaacgatcaaggatgtg
atcccacgctaccagacgatgcgcggcaagtatgtggaacggcgcttcggctgggactgt
cacgggctccccgtcgagaacatcatcgaacaggagaagggcatcaagtcccataaggag
atcgaagagatgggaatcgcagcgttcaacgggctctgccgcacggcagtgcagcgctat
gccaaggaatggaggacggtggtggagcgcatgggacgctgggtggacatggactgggat
taccgcaccatggatccggagtacatggaatcgatctggtgggtgttcagcgagctggcg
aagaaggatttgatctatgaaggccacaagcccatgcatatctgtccacggtgcgtcaca
ccactctcgaacttcgaggtgacacagggctacaaagacatcacagatacgtccgtgacg
gtgaagttcgaactcgccgacgagccgggcacgttcatcctcgcatggaccacgaccccg
tggacactgccggggaatttgctcctcgccgtggatcctcacataaaatatgtgaaatac
cagtatggttgtgaacgctatattctcgccaaaaaaatatttgatcagagaaaggatccg
aagaatttgctgcatcctctgttgtatgcaaaagcgaaaagggaaggtgaggagattgaa
gaaaatccggaaagcgtcgaagatatttcaatcaaaacccttctgggcaagcggtacatt
ccgctcttcccctacttccagaaccagaaagaatatgcgaacgcctaccggatcgtgggg
gcggactttgtgactgcggacgagggcaccggtatcgtgcacattgcgccggggttcggt
gaggacgactacaacctgggaaagaaggagaagctccccgtgctgcagcacgtgaacatg
gaagggaaattcgtttcggaggtgacggactttgcgggcatggaagtgaagcccatcgcc
gatccgggcaagaccgaccgtctggtgaccaagtggctcaaggaacacggcaagctcttc
gacgcaaaaccctacacgcacagctacccgcactgctggcgctgcgactcccctctcctg
aactacgctacgagctcatggttcgtttcggtggagaagatcaaagaagacgtactcgcc
gcgaatgcggaaacggagtgggtgcccgcgcacatccgcgacggacggttcggcaagtgg
ctggaaggggcacgagactgggcgatcagtcgcaaccgctactggggcacgcctttgccg
atctggcgctgcccggagacgaaggacatgaccgtgatcgccagcagagaggagctcacg
gcgcagaagaaattgcgcttcaccaaagtcacggcgctgcgccacggcgagagcgaaggc
aatctggtccctgtctatcagggcaaggagcccggaacgaacctgacggccaaaggaaaa
gagcaggcacgcaaggcagccgactacctgaacaccgcagaagtcactgcgatctactgc
tccccgctcgcccgcacgcggcagactgccgaggcaatcgccaagaagacgggggctccc
gtgatcgtggatccgcgcctgtgcgaggtgtgcttcggggactacgagggaaaaaccgtc
gacttctcggacctgaccttcgtgaaggcgcggcgcgcccacaagctttcgacggcaacg
cccgagagcatctatcactttccgggcatggagaaatggagcgatgttgcacagcgcatg
cgtgcgttcatggaggatgttctgccgctccaccgcggcggccatatcgtcctcgtcacg
catgccgaccccatccagaatatccgccacttcttcagcaacgaagatcccgtgaagctg
agccaccagccctaccccttcttcgccactccctacacgttctactgggatcacgaggcg
ggaaaggagctggacctgcacaagcacatcgtggacgagatcacgtggaatgcgggttcc
aagaaaaccgacacgcttctcaccgtcgtccgccacgggcagacggattacaacaaacag
gatctggtgaacggcggcaacatcgataccctcctcaacgagacgggacgcgaacaggtg
catgcactcgcgaagaaattaaagaagcggaagttcgacgtgatcatctcatcggatctc
aagcgcgccgtggagactgcggaaattctctccgcagaactcaaggtgccgcacacagcc
cggtggaaagaattgcgcgaacgcgatacgggagactggacgggaaagcccgtgaaggac
ttcatcacgctgctcccccgcagcatcacggcaagccccgctctccacccgggcacgccc
cccggtggggaaagcctgcaggcattcctgcagcggctcgaaaccgtgctggagaagatc
cgcgcggaattccccggcaagcgcgtgctcgtcgcctgtcattcgggtccgctcaggggc
ctgcaggcgatcgtggacaatctttccttcgcagaagcggccgtcatcgatccgaagaat
gcagagacgaccgacctcgccctccccgctctcatgcaccgcatccccgaggtgctcgac
tgctggttcgagagcggctcgatgccctacgcacaatcgcacttcccgttcgacttcgca
caggccggcaagggcaaaaaatccccgccgggctttccggcggacttcatcgccgagggc
atcgaccagacacgcggatggttctacacgctcatgattctctcttccgcgctcttcaag
aaaccggcgttcttcaactgcatcgtcaacggcatcgtgctggcggaggacggcaagaag
atgagcaagcggctcaagaactacccggaaccgaccgaggtcgtcaatcgtcacggcgcg
gatgccgtgcgcttcacattcatgagctcgcccgccgtgcgcggcgaggatctgcgcttc
tctgagaaactggtggaggagacggtgcgctccgtgctgctccccctctggaatgtctac
agtttcttcgtgacctacgcgaatgccgccgggttcgagcccacaggatcgcgcggacac
tccggccatccgctcgaccggtacctgcgcgccgaggtgcaggacctggtgaatcgcatg
accaagcaactcgacggctatgacctctctgcggcgtgtgccgaaatccacgaaaccatc
gatgccctgaccaactggtacgtgcgcctgtcgcgcaggatcttcgccggcaagggggca
gccgatgaggaagatacgagcccgtctgcagagctgagtgaacatgacgcggagcaggca
gccgcgctgggtacgctctacgatgcgctcctgaccctgtgccagacactcgctccgttc
tgtcctttcctcacggaggccatctacttaaacctggtaccggaggctcacacctcgatc
cacctgagcgattggcccgagccgcgcgccctcaccgccgaggaatgggaactcctgaaa
cgcaaccgcctgatgcgccacatcgtttcgctcggacacgccatccgctccggcaagaag
atcaaagtgcgccagccgctcgcgcgcgcaacggttgccctccccccctcgcttgccgct
ctcaggctcaccgaagaagaccgcgatctgctcaagaacgaactcaatgtgaaagatctg
gaattcaccgatgatccgggcacgctcgcctgccgcatcgcacaggtggacgcgcgcaaa
gtgggcccacgtctgggcgcccgcgtgcaggagatcattcgcgccggcaagagcggcgca
ttcaccgtgaaggaggatggctctgtgctgatcctcgacgaagtgctggcgccggatgaa
gtggcgatcgtctaccgcggaaaggaggggcaggatgctgcggtcgatcagggcatcgtc
gtctgcatggagaccgccatcacggaagagctcaagcgcgaagggctggcccgcgacgtg
atccgcgcggtgcagaagctccgcaaggaggcggggctgcacttcaccgatcgcatcgca
ctcagcatggatggcctggcggacgtgcagaaggagcacggggccgccattgcccaggaa
acgaatgccctctgggagcagaatgacggcgaggcccagtccgtcaccatcgacggaacc
gacgtgacggtgaggctgcagaagaggtag
DBGET
integrated database retrieval system
