Candidatus Peribacter riflensis: PeribacterA2_0955
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Entry
PeribacterA2_0955 CDS
T04147
Name
(GenBank) polysaccharide biosynthesis protein CapD
KO
K15894
UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:
4.2.1.115
5.1.3.-]
Organism
prf
Candidatus Peribacter riflensis
Pathway
prf00541
Biosynthesis of various nucleotide sugars
prf01100
Metabolic pathways
prf01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
prf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PeribacterA2_0955
Enzymes [BR:
prf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.115 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-inverting)
PeribacterA2_0955
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Gene cluster
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
3Beta_HSD
GDP_Man_Dehyd
RmlD_sub_bind
NAD_binding_10
NAD_binding_4
NmrA
KR
adh_short
Semialdhyde_dh
TrkA_N
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
ALM10315
UniProt:
A0A0S1SK98
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All DBs
Position
1003582..1004658
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AA seq
358 aa
AA seq
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MRAVQSTERPFGKTGNFTRKKAEIWYDSGVGIDSNLSILVTGGTGSFGKKFVETLLKGTP
PRKLIVFSRDELKQHEMRMQGYNAVCMRYFIGDVRDKDRLRRAMSDVDIVVHAAALKHVH
ACEYNPIEAIQTNIIGAQNIINAAIDAGVKKVLALSTDKAVNPVNLYGASKLCAEKLFVQ
SNAYSRPEGPVFSCVRYGNVIGSRGSVIPSFMEQRKTGTVTITDERMTRFWLSVEQGVDF
VLKCLSLMRGGEIFVPKIPSTRLIDLVEAVAPGCKHVTTGIRPGEKLHECLLSDEEVRHT
VELADMYVIEPEDESWGFKHWEGKRPKENWRYSSDTNAEKLSPEQWRALLKDAALADA
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgagggcagtgcaaagcaccgagagaccgtttggcaaaacagggaattttacgcggaag
aaagcggagatatggtacgattccggcgtgggtatcgattcgaacctctctattctcgtg
accggcggaacgggatccttcgggaaaaaattcgtcgaaacgctcctgaaaggcactcct
ccacgcaagttgatcgtcttcagccgcgacgagttgaagcagcacgagatgcgcatgcag
ggatataacgcggtatgcatgcgatacttcatcggtgatgttcgcgacaaggaccggctg
cgccgcgccatgagcgacgtcgacatcgtggtgcatgcagcggcactgaagcacgtgcac
gcctgcgagtacaaccccatcgaggcaattcagaccaatatcatcggtgcccagaacatc
atcaacgccgccatcgacgccggcgtgaaaaaagtgctggccctcagcaccgacaaagcg
gtgaatcctgtgaatctctacggtgccagcaagctctgcgcggagaaactgttcgtccag
agcaacgcctactcccgtccggaggggccggtctttagctgcgtgcgctacgggaacgtg
atcgggagccgtgggagcgtgattccatctttcatggaacagcgcaagacaggcacagtg
accatcacggacgagcggatgacgcggttctggctctcggtggaacagggagtggatttt
gtgttgaagtgcctgtcgctcatgcgcggcggggaaatttttgttccgaaaattccatcg
actcgtcttatcgacctcgtggaggctgttgctcccggctgcaagcacgtgacgacgggc
atccggcccggtgaaaagctgcacgaatgcctgctctcggatgaagaggtgcggcacacc
gttgaactcgcagatatgtacgtcattgagccggaggatgaatcgtggggcttcaaacat
tgggaaggcaagcgaccgaaggaaaattggcggtacagcagcgatacgaacgccgagaag
ctctctccggagcagtggcgcgcactgctgaaggatgcggctctcgctgacgcttga
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