Pseudomonas rhizosphaerae: LT40_04075
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Entry
LT40_04075 CDS
T03339
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
prh
Pseudomonas rhizosphaerae
Pathway
prh00300
Lysine biosynthesis
prh00550
Peptidoglycan biosynthesis
prh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LT40_04075
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LT40_04075
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
prh01011
]
LT40_04075
Enzymes [BR:
prh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
LT40_04075
Peptidoglycan biosynthesis and degradation proteins [BR:
prh01011
]
Precursor biosynthesis
Amino acid ligase
LT40_04075
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
AIS16627
UniProt:
A0A089YQE7
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Position
879022..880485
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AA seq
487 aa
AA seq
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MTMPLSKLFPEASRDPLIRELTLDSRNVRPGDLFLAVPGSKVDGRAHIADALKLGAAAVA
YEVEGATVLPLTDVPLIPVKGLIAQLSSIAGRFYGEPSRLVNMVGVTGTNGKTSITQLVA
QALDALGEHCGLIGTLGTGFYGALQSGRLTTPDPIAVQSTLYDLKKGGAHAVAMEVSSHA
LDQGRVAALDFDIAVLSNLSRDHLDYHGSMQAYAEAKARLFAWPGLKCRVLNLDDDFGRQ
LAEQEQDSRLITYSLADSAATLYCRDTRFDDHGVRATLVTAHGEYSLSSRLLGRFNLSNV
LAAVGVLMGMAYPLDDILKVMRNVEGPVGRMQRLGGGDKPLVVVDYAHTPDALDQVLQAL
RPHAKGQLLCLFGCGGDRDSGKRPLMAEVAERLADRVLVTDDNPRSEDPLRIFDDIRAGF
SSAANATFVAGRAAAIVQLIASASVDDVIVLAGKGHEDYQEINGERQPFSDLQQAEQALA
AWGAADA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgcccctgagcaagctttttcccgaggccagccgcgatcccttgatccgcgag
ttgaccctggacagccgcaacgtgcgccccggcgatctgttcctggccgtgcccggaagc
aaggtcgatggtcgtgcgcacatcgccgacgcgctcaagctcggcgcagccgccgtggcc
tacgaagtggaaggcgccaccgtgttgccactcaccgacgtgccgctgattccggtcaag
gggttgatcgcgcagttgtccagcattgccgggcgcttctatggcgagccgagccgcctg
gtcaacatggtcggcgtgaccggtaccaacggcaagaccagcatcactcaattggttgcc
caggcgcttgatgcgctgggcgaacactgtggcctgatcggcaccctgggcaccggtttc
tacggcgccctgcagagcggccgattgaccacgcccgacccgatcgccgtgcagtccacg
ttgtacgacctgaagaagggcggtgcccacgcggtcgccatggaagtgtcgtcgcacgcg
ctcgatcagggtcgcgtagctgcgctggatttcgacatcgcagtgctcagcaacctctcc
cgcgaccacctggactaccacggcagcatgcaggcgtatgccgaagccaaggcgcggctg
ttcgcttggccgggcctcaaatgccgcgtgctcaacctggacgacgacttcggccgacag
ctggccgagcaggaacaggattcacgcttgatcacctacagcctcgccgacagcgcagcg
accctgtactgccgtgacactcgtttcgacgaccacggcgtgcgcgccacactggtcacc
gcgcacggtgaatacagcctgagcagtcgcctgctgggccgtttcaacctgagcaacgtg
ttggcagcggtgggtgtgttgatgggcatggcctatccgctcgacgacattctcaaggtg
atgcgcaacgtcgagggcccggtcgggcgcatgcaacgcctgggcggcggcgacaagcca
ctggtggtggtcgactacgcgcacacgcccgatgccctggaccaggtcctgcaagcgctg
cggccccatgccaagggccagttgctgtgcctgttcggctgcggcggcgatcgcgacagt
ggcaagcgtccgctgatggccgaagtggccgagcgtctggccgaccgcgtgctggtcacc
gatgacaacccccgcagcgaagatccattgcgcattttcgacgacattcgtgccggtttt
tccagtgcggccaatgcgaccttcgtggccggtagggccgcggccatcgtccagttgatt
gcctcggcttcggtcgacgatgtcatcgtgctggctggcaagggtcacgaagactatcaa
gagatcaacggcgagcgtcagccgttctccgacctgcagcaggccgaacaggcgcttgct
gcatggggagctgccgatgcttga
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