Pseudomonas rhizosphaerae: LT40_09155 Help Entry LT40_09155        CDS       T03339                                  Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism prh  Pseudomonas rhizosphaerae Pathway prh03030   DNA replication prh03410   Base excision repair prh03420   Nucleotide excision repair prh03430   Mismatch repair Brite KEGG Orthology (KO) [BR:prh00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     LT40_09155    03410 Base excision repair     LT40_09155    03420 Nucleotide excision repair     LT40_09155    03430 Mismatch repair     LT40_09155  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:prh03032]     LT40_09155    03400 DNA repair and recombination proteins [BR:prh03400]     LT40_09155 Enzymes [BR:prh01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      LT40_09155 DNA replication proteins [BR:prh03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      LT40_09155 DNA repair and recombination proteins [BR:prh03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      LT40_09155    NER (nucleotide excision repair)     GGR (global genome repair) factors      LT40_09155    MMR (mismatch excision repair)     DNA ligase      LT40_09155   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       LT40_09155 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase HHH_2 BRCT HHH_5 DNA_ligase_ZBD PTCB-BRCT Nlig-Ia DUF4796_N PASTA RUBY_RBDX Motif Other DBs NCBI-ProteinID:  AIS17555 UniProt:  A0A089YUY5 LinkDB All DBs Position 1997042..1999384 Genome browser AA seq 780 aa AA seqDB search MTDATRILELRAELDQHNYRYHVLDEPSIPDAEYDRLFRELKALEADHPNLITPDSPTQR VGNAALSAFTQVRHEIPMLSLGNAFEEVDLREFDRRVTEGLDLPTGDLFGSGAAIHYSCE PKLDGLAVSLLYQDGALVRGATRGDGTTGEDISVNVRTIRNVPLKLHGSGWPPVLEVRGE VFMSKAGFERLNASQMEVGGKTFANPRNAAAGSLRQLDSKITASRPLEFCCYGIGQVTQD IATTHTGNLEQLKQWGMPISRELKVAENIEQCLEYYHDIGARRTQLPYEIDGVVFKVNSL AAQRELGFRAREPRWAIAHKFPAMEELTELLDVEFQVGRTGAVTPVARLKPVKVAGVTVA NATLHNMDEVARLGLMIGDTVIIRRAGDVIPQVMQVVTERRPENARLVHVPETCPVCGSH VERTQLIKRSKGKQTVSEGAVYRCVGRLACGAQLKQAIIHFVSRRAMDIDGLGEKSVEQL VDEGLVSSPADLYTLQFDDVVKLEGFAEVSSNNLLKAIEDSKRPSLARFIYALGIPDVGE ETAKVLARSLGSLQRVSEALPQVLTYLPDVGLEVAFEIHSFFEDPHNRTVIQQLLERGLQ LQEEGEVHPEYAASTTLAGMIAKLDISSVGPTGAEKLVAKLGSLNAIIAADGIDLRQALN TRQAEAVREYFKQPHHAETARAVEAQLQAFGMHWASEKKAVEGLPLAGQTWVLTGSLEQM SRDEAKQKLEALGAKVSGSVSAKTHTVVAGPGAGSKLAKASELGIKVLDEEQFLKFLASM NT seq 2343 nt NT seq  +upstreamnt  +downstreamnt atgaccgacgccacccgtatcctcgaactgcgtgccgaactcgaccagcacaactaccgc taccacgtgctcgacgaacccagcattcccgacgccgaatacgaccgtctgttccgcgag ctcaaagcccttgaagccgaccaccccaacctcatcactcccgactcgcccacccagcgc gtcggcaatgcggccttgagcgcattcacccaggttcgtcacgaaatccccatgctcagc ctgggcaacgccttcgaagaagttgatctgcgcgaattcgaccgtcgcgtcaccgaaggc ctcgacctgcccactggcgatctgttcggcagcggcgccgccatccactacagttgcgaa cccaagctcgacggcctggccgtgtcgctgctgtaccaggacggcgcccttgtgcgtggc gcgacccgcggcgatggcaccaccggcgaagacatcagcgtcaacgtgcgtaccattcgc aacgtcccgctcaagctgcacggcagcggctggccgccggtgctggaagtgcgcggcgag gtgttcatgtccaaggccggtttcgaacggctcaacgcaagtcagatggaagtcggcggc aaaaccttcgccaatccgcgcaacgccgcggccggcagtctgcgccagttggactcgaag atcaccgccagccgtcccctggaattctgctgctacggcatcggtcaggtcacccaggac attgccaccacccacaccggcaacctcgaacagctcaagcagtggggcatgccgatcagt cgcgaactcaaggtcgccgagaacatcgagcagtgcctggagtactaccacgacatcggc gcgcgccgtacccagctgccctatgaaatcgacggcgtggtgttcaaggtcaacagcctg gcagcgcagcgcgaactcggtttccgcgcccgcgagccgcgctgggccatcgcccacaag tttccggccatggaagagctcaccgaactgctcgacgtggagttccaggtcggccgcacc ggcgccgtcacgcctgtggcgcgcctcaagccggtcaaggtggccggtgtgacggtggcc aacgccaccctgcacaacatggacgaggtggcacgcctgggcctgatgatcggcgacacc gtgatcatccgccgcgccggcgacgtaattccccaggtcatgcaggtcgtcaccgaacgc cgtccggaaaacgcccgcctagtgcacgtgccggaaacctgcccggtgtgcggttcccat gtcgagcgcacgcagttgatcaagcgcagcaaaggcaagcagaccgtcagtgaaggtgcg gtgtatcgctgcgtcggacgcctggcctgtggtgctcagctcaagcaggcgatcattcat ttcgtttcccggcgtgccatggacatcgacggcctgggtgaaaaaagcgtcgagcaactg gttgatgaaggcttggtgagctcgccggccgacctctacaccctgcagttcgacgacgtg gtcaaactggaaggtttcgccgaggtgtccagcaacaacctgctcaaggccatcgaagac agcaagcgacccagcctggcgcggttcatctacgccctgggcattccggacgtaggcgag gagacggcgaaagtactggcgcgttcgttaggttcgctgcaacgcgtcagcgaggcgttg ccgcaggtgctgacctacctgccggacgtcggcctggaagtggccttcgaaatccacagc ttcttcgaggacccgcacaaccgcaccgtcatccagcaactgctcgaacgcggcctgcag ttgcaggaggagggcgaggtgcaccccgagtacgccgccagtacgaccctggccgggatg atcgccaaactggacatcagctcggtaggcccgaccggcgcggaaaagctcgtggccaaa ctcggcagcctgaacgcgatcatcgccgccgacggcatcgacctgcgccaggcactcaac actcggcaggcagaagcggtgcgcgagtacttcaagcaaccgcaccacgccgagacggcg agggcggtagaagcgcaactgcaggcgttcggtatgcactgggccagcgagaagaaggcc gtcgaaggcctgccgctggcagggcagacctgggtgctgaccggctcgctcgaacagatg agccgtgacgaagccaagcagaaactcgaagccctcggtgccaaggtatcaggctcggtc tccgccaagacccacaccgtcgtcgccggccccggcgccggctccaagctggccaaggcc agcgaactgggcatcaaggtcctcgacgaagagcaattcctgaagttcctggcatcgatg taa

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