Porifericola rhodea: PZB74_02960
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Entry
PZB74_02960 CDS
T09201
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
prho
Porifericola rhodea
Pathway
prho03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
prho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PZB74_02960 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prho03400
]
PZB74_02960 (nth)
Enzymes [BR:
prho01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PZB74_02960 (nth)
DNA repair and recombination proteins [BR:
prho03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PZB74_02960 (nth)
Prokaryotic type
PZB74_02960 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
EndIII_4Fe-2S
HHH_8
HHH_5
ZYG-11_interact
DUF2400
Motif
Other DBs
NCBI-ProteinID:
WKN32311
LinkDB
All DBs
Position
671219..671866
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AA seq
215 aa
AA seq
DB search
MNKKERFQAFTQYFAETKPEPQTELSYRNPFELLVAVILSAQCTDKRVNMVTPALFQSFP
TPELLAQATFDELFPFIKSISYPNNKTKHLIGMANMLVNDFGSEVPETVEQLQKLPGVGR
KTANVISSVIFNQPAMAVDTHVFRVSKRLGLVTLSAKTPLEVEKQLVRHIPEEYIAKAHH
WLILHGRYVCLARTPQCSKCELTHFCRYYEKNITT
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaaagagcgctttcaagctttcactcaatattttgctgaaacaaaacctgaa
cctcaaacagaattaagctaccgtaacccttttgagttattggtagctgttattttgagt
gctcagtgtacagataagcgggtaaatatggtaactcccgctctttttcagtcttttcct
acaccggagcttttagctcaggctacttttgatgaactctttccttttatcaaaagcata
tcttatcccaataacaagactaagcatctgattggtatggctaatatgctggtcaatgac
tttggcagcgaagtaccagaaacagtagagcagttgcaaaaactgccgggagtgggccgc
aaaacagctaacgtaatttcttcagtcatctttaaccagccagccatggcagtagatacg
catgtgtttagggtatctaagaggttaggcctagtcacgctgtctgcaaagacaccactt
gaagtagagaagcaactggttcgccacattccagaagaatatattgctaaagcccaccat
tggctcatacttcatggacgctacgtatgccttgcgcgtaccccccaatgtagcaaatgc
gagctcacacatttttgtagatattacgagaagaatataactacttaa
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