Pseudomonas rhizophila: CRX69_13770 Help Entry CRX69_13770       CDS       T09779                                  Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism prhz  Pseudomonas rhizophila Pathway prhz03030   DNA replication prhz03410   Base excision repair prhz03420   Nucleotide excision repair prhz03430   Mismatch repair Brite KEGG Orthology (KO) [BR:prhz00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     CRX69_13770    03410 Base excision repair     CRX69_13770    03420 Nucleotide excision repair     CRX69_13770    03430 Mismatch repair     CRX69_13770  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:prhz03032]     CRX69_13770    03400 DNA repair and recombination proteins [BR:prhz03400]     CRX69_13770 Enzymes [BR:prhz01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      CRX69_13770 DNA replication proteins [BR:prhz03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      CRX69_13770 DNA repair and recombination proteins [BR:prhz03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      CRX69_13770    NER (nucleotide excision repair)     GGR (global genome repair) factors      CRX69_13770    MMR (mismatch excision repair)     DNA ligase      CRX69_13770   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       CRX69_13770 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT Nlig-Ia DNA_ligase_ZBD 5_3_exonuc PTCB-BRCT DUF4796_N Motif Other DBs NCBI-ProteinID:  AVU76222 UniProt:  A0ABM6UFL4 LinkDB All DBs Position 3012320..3014677 Genome browser AA seq 785 aa AA seqDB search MTAVQTRIQQLRTELDQHNYRYHVLDEPSIPDAEYDRLFHELKALEEQHPELVTSDSPTQ RVGSVALSAFSQVRHEIPMLSLGNAFDETTMREFDRRVTEGLDLPMGDLLGGGAAVEYSC EPKLDGLAVSLLYQDGLLVRGATRGDGTTGEDISVNVRTVRNIPLKLQGSGWPPVLEVRG EVYMSKAGFERLNATQLEAGGKTFANPRNAAAGSLRQLDSKITANRPLEFCCYGIGQVTA DIADTHIGNLKQLKAWGLPISRELKLAHGIDECLDYYRDIGERRNALPYEIDGVVFKVNS IASQRELGFRAREPRWAIAHKFPASEELTELLDVEFQVGRTGAVTPVARLKPVKVAGVTV ANATLHNMDEVARLGLMIGDTVIIRRAGDVIPQVVQVVTERRPENARPVAIPQQCPVCGS HVERTQLIKRSKGRETISEGAVYRCVGRLACGAQLKQAIIHFVSRRAMDIEGLGEKSVEQ LVDEGLVGSPADLYALTFEQVVDLEGFAELSSKNLLAAIVDSKKPSLARFIYALGIPDVG EETAKVLARSLGSLERVQAALPQVLTYLPDVGLEVAHEIHSFFEDSHNRQVIEGLLRHGL DIQDQGELGAEFSASTTLGGFLDKLNIPSVGPGGAQKLADKFGSLEAVMNADWLDMRQAL PEKQANAVREFFAIAANRQQAEAAEKQLQAFGMHWQSEKKVVEGLPEAGHTWVLTGSLEL MSRDVAKDKLESLGAKVAGSVSAKTHCVVAGPGAGSKLTKANELGLKVLDEEAFVAFLSQ HGITV NT seq 2358 nt NT seq  +upstreamnt  +downstreamnt atgactgccgtccaaacccgcatccaacagttgcgtaccgagctggatcagcacaactac cgctaccacgtcctcgacgaaccgagcatcccggacgccgagtacgaccgcctgttccat gagctcaaggccctggaagagcagcatccggagctggtgaccagcgactccccgacccag cgtgtcggcagtgttgcactgtcggccttcagccaggtccgccacgaaatcccgatgctc agcctgggcaatgccttcgacgaaaccaccatgcgtgaattcgaccgccgggtgaccgaa ggcctcgacctgcccatgggcgacttgctgggcggtggcgcggcggtggagtacagctgt gagccgaagctcgacggcctggcggtcagcctgctgtaccaggacggcctgctggtgcgc ggcgccacgcgcggcgacggcaccaccggcgaagacatcagcgttaacgtgcgcacggtg cgcaacatccccctcaagttgcagggcagtggctggccgccggtgctggaagtgcgcggc gaggtatacatgtccaaggccggcttcgagcgtctcaacgccacgcaactggaggcgggc ggcaagaccttcgccaacccgcgcaacgcggccgcgggcagcctgcgccagctggattcg aagatcaccgccaatcgtccgctggaattctgctgttacggcatcggccaggtgacggcg gacattgccgacacccacatcggcaatctcaagcagctcaaggcctggggcttgcccatc agtcgcgaactgaaactggcccacggcatcgacgagtgcctggactactaccgtgacatc ggcgagcggcgtaacgcgctgccatacgaaatcgatggcgtggtgttcaaggtcaacagc atcgcctcccagcgcgaactgggtttccgcgcccgggaaccgcgctgggccatcgcccat aaattcccggccagcgaagaactcaccgaactgttggacgtcgagttccaggtcggccgc accggcgccgtgacacccgttgcgcgactcaagccggtcaaggtagccggtgtgaccgta gccaacgccacgctgcacaacatggacgaagtggcgcgcctgggcctgatgatcggcgac acggtgattatccgccgcgccggtgacgtgatcccgcaagtggtgcaagtggtcaccgag cgtcgcccggagaacgcccgccccgttgcaatcccgcaacagtgcccggtgtgtggctcc catgtggaacgcacgcaactgatcaagcgcagcaagggccgtgaaaccatcagcgaaggc gcggtgtaccgctgcgttggtcgtctggcctgtggtgcgcagctcaagcaggcaatcatt catttcgtgtcgcgccgggccatggacatcgaaggcctgggcgagaagagtgtcgagcag ttggtggacgaagggctggtgggctcgcctgccgatctgtatgccctgaccttcgagcaa gtggtcgacctggaaggcttcgccgaactgtcgagcaagaacctgttggcggccatcgtc gacagcaagaagccgagcctggcgcgcttcatctacgccctcggcatcccggacgtgggc gaggaaaccgccaaggtcctggcccgctccctcggctcactggagcgtgtgcaagcggcc ttgccgcaagtgctcacgtacttgccggacgtcggcctggaagtggcccacgagatccac agcttcttcgaagactcgcacaaccgccaggtgatcgagggcttgctgcgccatggcctg gatatccaggaccagggcgaactgggcgccgagttctccgccagcaccaccctgggcggt ttcctggacaagctgaacattccctcggtcgggccgggcggggcgcagaagctggcggac aagttcggttcgctcgaagcggtgatgaacgccgactggctggacatgcgccaggccctg ccggaaaaacaggccaacgccgtgcgcgagttcttcgccatcgccgccaaccgccaacaa gccgaagccgccgagaagcaactgcaggccttcggcatgcactggcagagcgagaaaaaa gtcgtcgaaggtttgcccgaagccgggcacacctgggtgctgaccggatcgctggagttg atgagccgcgatgtcgccaaggacaaactggaaagcctgggggccaaggtggccggttcc gtgtcggcgaaaacccattgcgtcgtcgccgggcctggggccgggtcgaaactgaccaag gccaatgagctggggctcaaggtgctggatgaagaagcgtttgtggcgttcttgagtcag cacggcattacggtttag

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