Paenibacillus riograndensis: PRIO_6384
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Entry
PRIO_6384 CDS
T03849
Name
(GenBank) peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
KO
K07260
zinc D-Ala-D-Ala carboxypeptidase [EC:
3.4.17.14
]
Organism
pri
Paenibacillus riograndensis
Pathway
pri00550
Peptidoglycan biosynthesis
pri01100
Metabolic pathways
pri01502
Vancomycin resistance
pri02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pri00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PRIO_6384
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PRIO_6384
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PRIO_6384
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pri01002
]
PRIO_6384
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pri01011
]
PRIO_6384
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
pri01504
]
PRIO_6384
Enzymes [BR:
pri01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.14 zinc D-Ala-D-Ala carboxypeptidase
PRIO_6384
Peptidases and inhibitors [BR:
pri01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
PRIO_6384
Peptidoglycan biosynthesis and degradation proteins [BR:
pri01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
PRIO_6384
Antimicrobial resistance genes [BR:
pri01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
PRIO_6384
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VanY
VldE
DUF1244
SurA_N_3
Motif
Other DBs
NCBI-ProteinID:
CQR58731
UniProt:
A0A0E4HIH9
LinkDB
All DBs
Position
I:complement(7443940..7444866)
Genome browser
AA seq
308 aa
AA seq
DB search
MSKTAKIVILLIIVVAVGWGIGKYNSPSPSASQEEGASASAGGELQGQPGSAPEPSAVAS
GAPEGSDTATGDGASAEPDNSGNEAAVKPSPTPADKPSDPDSSGSADPAAELTAAEPDSV
AAMINKQYKLPDGYKPADLVYPDVPFIFSDKIEKRMLRKTAADALEKMFAGALKDGVHLA
GVSGYRSEATQTRLFNNYVKRDGEEKARTYSAVPGHSEHQTGLAIDLSGTDGKCAAETCF
AGTEEANWLAAHAAEYGFIIRYPEGKQAITGYMYEPWHVRYVGKDIAASIAERGITLEEY
YDAVPVSK
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagactgctaaaatcgtcattttactcattattgtagttgctgtaggctggggg
ataggcaaatataactcgccgtcgccttcggcttcacaggaggagggagcctccgcaagc
gcgggtggtgagcttcagggacagccaggctccgcaccggagccttcagccgtggccagc
ggcgctccagagggatcagacacggccactggagatggggcttctgccgagccggataat
tccggcaatgaggcggccgtgaagccttcgccaacgccagcggataagccctctgatccg
gacagctccggttcagccgatccggcagcagagcttaccgctgccgaaccagatagtgtg
gctgctatgatcaataagcagtacaagctgccggatggctataagccggctgatctggtc
tatcctgacgtgccgtttattttctcggataagattgagaaacggatgctgcggaagact
gctgctgatgcactggagaaaatgttcgcaggtgcactgaaagacggcgtacatctggcc
ggggtttccggctaccgttccgaggctactcagacccggctgtttaataactatgtcaaa
agagacggtgaagagaaagcccgtacctatagcgccgtgcctggacacagcgagcatcag
acagggctggcgatcgacctgtccgggacggatggcaaatgcgcggcagaaacctgcttt
gccggaacagaggaagccaactggctggcagctcacgcggctgagtatggcttcattatc
cgctaccctgagggcaaacaggcgatcaccgggtatatgtatgagccttggcatgtccgc
tatgtaggaaaagatattgctgcctccatcgcggagcggggcattacgctggaagagtac
tatgatgctgttccggtatccaaataa
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integrated database retrieval system
