Pedobacter riviphilus: H9N25_05330
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Entry
H9N25_05330 CDS
T08657
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
prk
Pedobacter riviphilus
Pathway
prk01501
beta-Lactam resistance
prk01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
prk00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
H9N25_05330
01503 Cationic antimicrobial peptide (CAMP) resistance
H9N25_05330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
prk03036
]
H9N25_05330
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prk02000
]
H9N25_05330
01504 Antimicrobial resistance genes [BR:
prk01504
]
H9N25_05330
Chromosome and associated proteins [BR:
prk03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
H9N25_05330
Transporters [BR:
prk02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
H9N25_05330
Antimicrobial resistance genes [BR:
prk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
H9N25_05330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
QNR85872
LinkDB
All DBs
Position
1272622..1273824
Genome browser
AA seq
400 aa
AA seq
DB search
MKSLHRLYPLLNAVKQFNSIKLLLTISLLSIILVSCKSSPDQAAAAPPPPALPVSAINAS
TETTYIEYPASIQGAVDIDVRPQVSGYLQSVLVNEGAYVTAGQTLFKINENPYREALNNA
KASLHAAEAAILNAQLEVDKLTPLVQNKVVSDIQLKTAKTAYKIAQANAEQAKASVAAAQ
INLGYTNVKATVSGYIGRIPKKQGSLVSPTDQVALTQLSDIHEVHVYFSLAENDFNSFNA
NYPGKTPADRIKHLPAVELLLADNSAYPIKGKIDMIDGQFDKNTGAITLRASFPNASGVL
RSGNTGKIRLGLQHDNAILVPQSSTVEMQDKVFVFTVGDSSKVKKQAITIVGKAGENYLV
KDGVKVGDQIVLSGVDKLQEGMVIQPQKAADKVAVAKTKN
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctctacatcgcttgtaccctttacttaacgctgttaaacagtttaatagtatt
aagttattgttaacaatttctctactatctataattctggtgagttgtaagtcgtctcct
gaccaggctgcagctgcaccaccgccaccagctttacctgtaagcgcaattaacgcgagc
acagaaactacgtatattgaatatccggcttctattcagggggctgttgatatcgatgtg
cgtccgcaggtaagtggttacttacaaagtgttttggttaacgaaggcgcttatgtaacc
gctgggcaaaccctgtttaaaattaacgaaaacccttatcgcgaggctttaaacaatgct
aaagcgagtttacatgcagcagaagccgctatcttaaacgctcagttagaggttgataag
ttaacaccacttgttcagaataaagttgtttctgatattcagttaaaaacggcaaaaaca
gcttataaaattgcgcaggcaaatgccgaacaagctaaagccagtgttgctgcagcacag
ataaacttaggttataccaatgttaaggctactgttagcggttacatcggccgtattcct
aaaaaacagggaagtttagtttctccgacagatcaggttgctttaacacagttatccgat
atccacgaagtgcatgtttatttctcccttgcagaaaacgacttcaacagttttaatgca
aactacccgggtaaaacacctgccgacaggattaaacatttgccagcggtagaactttta
ttggctgataattctgcctatccaattaaaggcaagatcgatatgatcgatggtcagttt
gataaaaacacaggtgccattacgcttagggcaagttttcctaatgcaagtggcgttctt
cgctcgggtaataccggtaagatccgtttaggtttgcagcacgataatgctattctggtg
cctcagtcatcaacggtagaaatgcaggataaagtatttgtatttactgtaggcgacagc
agtaaggtgaaaaaacaagctattaccattgttggtaaagccggcgaaaattacctggtt
aaagacggggtaaaagttggcgaccagattgtgttaagcggcgttgataaattacaggag
ggcatggtgatccagcctcaaaaagcagcagataaagtagctgttgcaaaaacaaaaaat
taa
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