Pedobacter riviphilus: H9N25_07035
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Entry
H9N25_07035 CDS
T08657
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
prk
Pedobacter riviphilus
Pathway
prk01501
beta-Lactam resistance
prk01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
prk00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
H9N25_07035
01503 Cationic antimicrobial peptide (CAMP) resistance
H9N25_07035
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prk02000
]
H9N25_07035
01504 Antimicrobial resistance genes [BR:
prk01504
]
H9N25_07035
Transporters [BR:
prk02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
H9N25_07035
Antimicrobial resistance genes [BR:
prk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
H9N25_07035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Omp28
4HB_MCP_1
Motif
Other DBs
NCBI-ProteinID:
QNR86160
UniProt:
A0ABX6TRD5
LinkDB
All DBs
Position
1737637..1740807
Genome browser
AA seq
1056 aa
AA seq
DB search
MFSKFIQRPVLSIVISLVIVFLGVLAISYLPVTQFPTISPPKVNITAEYPGANNELLIKS
VIIPLERALNGVPGMKYIASDAGNDGEASIQVVFNLGTDPNQASLNVQNRVAAVTNKLPP
LVIREGVKITREESNMLMYINLYSKDPKMNQNFLYNYADINLLSELKRVDGVGFADILGD
RDYAMRIWLKPDRMQAYKISVDEVMNALEGQSLEASPGKTGESSGKRSQAFEYVLKYSGR
FSTKEGYENIVVRATPNGQLLRLKDVADVDFSASAYNLYSTLNGKASAAIVLKQSYGSNA
SQVIKDVKAKMAEIKSASFPKGLDYEISYDVSKFLDASIEKVIHTLVEAFILVGLVVFLF
LGDWRSTLIPAIAVPVSLIGTFVFMQFFGITLNLITLFALVLAIGVVVDDAIVVIEAVHA
KMEHDRHLSVLKATQQAMKEIGGAIIAITFLMASVFIPVAFMSGPVGIFYRQFSITMATA
IILSGIVALTLTPALCAIMLKNNHGSKKRKTPIDRFLDGFNNGFAKLSGKYELVLTKVVS
RRILTFGILVAFCLGIWGLSGSVPSGFIPNEDQGMVYAIIQTPPGSTLERTDQIAEKLQK
MCEDIDGVKSVSSLAGYEILTEGTGSNSGTCLINLKDWSERKHSAQEIIQELEEKSKSIL
GAAIEFFQPPAVPGYGAAGGFELRLLDKAGSGDYKKMETVANDFVRELNKRKELSSVFTF
YSASFPQYMLDVDNDIAQQKGVSIDNAMNTMSTFVGSDYETSFIKYDRQYKVIVQALPQY
RALPEDILKLSVKNNRDEMVPFSAFIKMRRVYGLSEITRHNMYNASEISGQAAPGYSSGE
AIKAITEVAQKTLPRGFGIDWAGISKDEVSRGNEAIYIFLICLGFVYLVLAAQYESFILP
LSVILSLPAGIFGAFLFLKLLGLENNIYAQVAMVMLIGLLGKNAVLIVEFATQRHAQGAS
VLKAAMEGASVRFRPILMTSFAFIAGLIPLMIATGPGKIGNRTIGSAAAGGMLFGTIFGV
IVIPGLYYIFGSIAAKHKLIKIEEEHPLTEEIENNV
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtaaattcatacaaaggcctgtcctttctatcgtaatatcacttgttattgtg
tttttgggtgtgctggccattagctacctgcccgttacacagtttcctactatatcccct
cccaaagtaaatataactgcagaatatccgggagcgaataacgaattgttgattaaatct
gtaattattccacttgagcgtgcacttaacggtgtaccgggaatgaaatacattgcatct
gatgcaggtaatgatggtgaggcatctatacaggtggtatttaacctgggtaccgatccc
aatcaggcctcgcttaacgtgcagaaccgtgtagcagccgttaccaataaacttcctcct
ctggtaattcgcgagggtgtaaaaatcacacgagaagagtctaacatgttgatgtacatc
aacttgtatagtaaagatcctaaaatgaaccagaactttctgtataactatgccgatatc
aacttgctttcggagcttaaaagggttgatggtgtgggttttgccgatattttgggtgat
agggattatgccatgcgtatctggttaaaacccgatcgtatgcaggcttataaaatctcc
gttgatgaagtaatgaatgcccttgaagggcaaagcttagaggcctcgcctggtaaaaca
ggagagagttcgggtaaacgctcgcaggcttttgagtatgtattaaagtactcaggccgt
ttcagtactaaagaggggtacgaaaatatcgtggtcagagctacacctaatggccaattg
ctccgcttaaaagatgtggcagatgtagattttagtgcttcggcttacaatttatattct
actttaaatggaaaagcatctgcggctatcgtgttaaaacaatcgtatggtagtaatgca
agtcaggttattaaagatgtgaaggctaaaatggccgaaattaaatctgcttcatttcca
aaaggtttagattacgagatcagttacgacgtttccaaattcctggatgcatctatagaa
aaggtaatccatactttggtagaggcctttatcctagtgggtttagtggtatttctgttc
cttggcgattggcgttcaacccttatcccagccattgctgtaccagtatcgttaatcgga
acatttgtatttatgcagttctttggcattacacttaacttaattaccttatttgcattg
gtgcttgccattggggttgtagtggatgatgcaattgtggtaatcgaggcggtgcacgct
aagatggagcacgataggcatctatcggtattaaaagctacacaacaagccatgaaagag
attggtggtgccattatcgccattacctttctaatggcatcggtatttattccggtagct
tttatgtcgggcccggtaggtattttctaccgtcagttctctattaccatggcaacggcg
attatcctttcaggtattgtagccttaacacttacacctgcattgtgtgccattatgttg
aagaataaccatggatcgaagaaaaggaaaactcctattgatcgcttcttagacggtttt
aataatggttttgccaaactttcgggtaaatatgaactggtgttaaccaaagtagtaagc
cgtaggatattaacttttggtatactagtggccttttgtttaggtatttggggattaagt
ggaagtgtgccttcaggttttattccgaacgaagatcagggaatggtttatgccattatc
caaactcctccagggtctactttagaacgtaccgatcagattgctgagaaactgcagaaa
atgtgcgaagacattgatggcgtaaagtcggtttcatctttggcaggatacgaaattcta
acagaaggtacaggatctaactcgggtacctgcttaattaaccttaaagactggagcgaa
cgtaaacactctgcgcaagaaattattcaggaactggaggaaaaatcaaaatctatacta
ggtgcagctatcgaatttttccaaccaccagcggttccgggttatggtgctgcgggcggt
ttcgaactccgtttattggataaagcaggtagcggcgattacaaaaaaatggaaaccgtt
gccaatgattttgtgcgcgagctgaacaaacgcaaagagttatcatctgtatttactttc
tacagtgccagtttccctcaatatatgttggatgttgataacgatattgcccaacaaaag
ggggtaagcatcgataacgcgatgaataccatgtctacttttgtaggtagtgattatgaa
accagttttattaagtacgaccgtcagtacaaggtaattgtacaggccttacctcaatac
agggctttaccagaagatattttaaaactttcggttaaaaacaaccgcgatgaaatggtg
cctttctcggcctttatcaaaatgcggcgggtttacggtttgtcggagataaccagacac
aatatgtacaatgcttctgagatcagtggacaagcggctccgggttatagttctggtgaa
gcgattaaagccattacagaagtagcacagaaaacattgccaaggggatttggtatcgat
tgggctggtatctctaaagatgaggtatcgagaggtaacgaagccatttacatcttcctg
atctgtttgggattcgtttacctggtgttggcagcacaatacgaaagttttattttacct
ctttcggttatcctttctttaccagcaggtatttttggggctttcttattcttaaaattg
ttaggattggaaaataacatttatgcacaggtagccatggtaatgttaatcggtttgctg
ggtaaaaatgcggtgctgattgtggagtttgctacgcagcggcatgcccaaggcgcgtct
gtactaaaagcggcaatggaaggcgcaagcgtgcgtttccgaccaattttaatgacctct
tttgctttcatcgcaggcttgatccctttgatgatcgcaaccggaccaggtaagatcggt
aaccgcaccattggttcggctgctgcagggggtatgcttttcggtaccattttcggggta
attgtaatccctggcttatattatatattcggatcaattgcagcaaaacacaagctgatc
aaaattgaagaagaacatccattaactgaagaaattgagaataatgtttaa
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