Pedobacter riviphilus: H9N25_16985
Help
Entry
H9N25_16985 CDS
T08657
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
prk
Pedobacter riviphilus
Pathway
prk00020
Citrate cycle (TCA cycle)
prk00785
Lipoic acid metabolism
prk01100
Metabolic pathways
prk01110
Biosynthesis of secondary metabolites
prk01120
Microbial metabolism in diverse environments
prk01200
Carbon metabolism
prk01210
2-Oxocarboxylic acid metabolism
Module
prk_M00009
Citrate cycle (TCA cycle, Krebs cycle)
prk_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
prk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
H9N25_16985
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
H9N25_16985
Enzymes [BR:
prk01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
H9N25_16985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
QNR83629
LinkDB
All DBs
Position
complement(4136858..4139653)
Genome browser
AA seq
931 aa
AA seq
DB search
MDKLSYLNGANAEYIESLYQSYQQDPESVEFGWQKFFEGFDFGRGSEAPAVTAETPEQFL
KEVNVLNLIDGYRSRGHLFTHTNPVRERRKHLPTLDLANFGLSDADLETVFNSGVEIGIG
AAKLKDIVAFLKQTYAGSIGAEFKFLRTPEVLNWIQQKMESARNTPNFSIDEKKRILRKL
NEAVSFENFLGTKFLGQKRFSLEGAEALIPALDSVIEKGAELGIEEFVIGMAHRGRLNVL
ANIMQKTYKDIFAEFEGKSYNPDTPFGGDVKYHLGYSTDVATVSGKSVHLSLCPNPSHLE
TVDGVVEGMSRSKIDFKYGGDNSRLAPILIHGDASVAGQGIVYEVIQMAGLEGYKTGGTI
HLVINNQIGFTTNYKDARTSTYCTDIAKVTLSPVFHVNGDDPEALVYAINLAMEYRQKYK
NDVFIDILCYRRFGHNESDEPKFTQPLLYKTIEKHPNPREIYIDQLTKEGKLEAGLAKEM
EKDFRNILQERLNEAKEFVAGNAEVKFGGAWADLRMATPKDFESSPVTAVKKSTLLEIGK
RITTLPSNKKFFKKIEKLFLERTKMVNETHVFDWAMGEQLAYGTLLSEGKRVRLSGQDVE
RGTFSHRHAVLTLEDSEEEYVPLANISDQQAAFDIYNSHLSEYGVLGFEYGYAMANPNAL
TIWEAQFGDFFNGAQIVVDQYIASAETKWQRENGLVMLLPHGYEGQGPEHSSARIERFME
LCADYNMQVTNCTTPANFFHVLRRQFKRDFRKPLVVFTPKSLLRHPACVSKLEEFTEGGF
KEVIDDVNVKVADVTRIVFCSGKIYYELLEKQQADKLKHVALVRVEQLYPTPVDQMEAIQ
KKYKNAKEVFWVQEEPENMGAWPYLFRKLYKTALKGIDVISRRESSSTATGFAKQHANQQ
AYILAKALEISVTDDVKDIAKKATKKLVQID
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggataaattatcttatcttaatggcgcaaacgccgaatatatagagtctttatatcaa
tcctatcaacaagatcctgagtctgttgaatttggttggcagaaatttttcgaaggtttc
gattttggaagaggatcagaagcccctgcagtaacagcagaaactcctgaacaattttta
aaagaggttaatgttttaaatctgattgatggctatcgcagccgcggtcacttgtttaca
cataccaatccggttcgcgaaagacgtaaacatttaccaacattagatctggcaaatttt
ggattatctgatgccgatttggaaaccgttttcaactctggtgtggaaattggtatcggt
gcagcaaaattgaaagatattgtagcctttttaaaacaaacatacgcaggttctatcgga
gccgaatttaagtttttacgtacacctgaagtgttgaactggattcagcaaaaaatggaa
agtgcgcgtaatacccctaatttctcgatcgatgagaaaaaacgtattcttcggaaatta
aacgaagcagtaagttttgaaaatttcttaggtacaaagtttctgggccaaaaacgtttt
tcattagaaggtgcagaagctttaattcctgctttagattcagtaattgaaaaaggtgct
gaactgggaattgaagaatttgtaattggtatggcacaccgcggtcgtttaaacgtgctg
gccaatatcatgcaaaaaacatacaaagatatttttgctgagtttgaaggtaaaagctac
aatccagataccccatttggtggcgatgtgaaatatcacttaggttactctacagatgtt
gctaccgtttcgggcaaaagcgttcacttaagtttatgtcctaacccatcgcacttagaa
acagttgacggtgtggtagaaggaatgagccgctcgaaaatcgatttcaaatatggtggc
gataatagtcgcttagcaccaattttaattcatggcgatgcatcagttgccggacaaggt
attgtttacgaggtaattcagatggcaggtcttgaaggttataaaactggtggaactatt
cacttggtaattaataatcagattggttttaccaccaattataaagatgcccgtaccagt
acctattgtaccgatattgctaaagtaactttatctccggttttccacgtaaatggtgat
gatcccgaggctttggtttatgcaattaacctggcaatggaataccgtcagaaatataaa
aatgatgtttttattgacatcctttgctatcgtcgctttgggcataatgagtctgatgaa
cctaagttcacgcagccattattatacaaaaccatcgaaaaacaccctaatccaagggaa
atctatatcgatcagttaaccaaagaaggtaaattagaagctggtttggcaaaagaaatg
gaaaaagatttccgtaatattttgcaggaacgtttaaacgaagctaaagaatttgttgcg
ggtaatgccgaagttaaatttggtggtgcatgggcagatttgcgtatggctacacctaaa
gatttcgaatcttcaccggttactgcggttaaaaaatctactttattagaaatcggtaaa
cgcattactactttaccatcaaataaaaagttcttcaagaaaattgaaaaattatttctt
gagcggaccaaaatggttaacgaaacacatgttttcgactgggcaatgggcgagcagttg
gcttatggtactttgttatcagaaggtaaacgtgttcgtttaagcggtcaggatgtagaa
agaggaacattctctcaccgtcatgcggtactaacgttagaagatagtgaggaagaatat
gtaccgttggcaaacatttcagatcaacaagctgctttcgatatttacaattcacactta
tcagaatacggcgttttaggtttcgagtatggctatgctatggcaaatccaaacgcatta
accatttgggaagcacaatttggcgatttctttaacggagcacagattgttgtcgatcag
tatattgcaagtgccgaaaccaaatggcaacgcgaaaacggtttggttatgttattgcct
cacggttacgaaggccagggaccagagcactcatcagcacgtattgagcgttttatggag
ctttgtgccgattacaacatgcaggtaaccaactgtacaactccggcaaacttcttccac
gttttacgtcgccagtttaaacgcgatttccgtaaaccattggttgtatttactcctaaa
agtttattacgccacccagcctgtgtttctaaattagaggaatttaccgaaggtggcttt
aaagaagtaattgacgatgtaaatgttaaagttgcagatgtaacacgtattgtcttctgt
agcggtaaaatttactacgagttattggagaaacaacaggctgataaattgaaacacgta
gccttggttcgtgtagagcagttgtacccaactccggttgatcagatggaggccatccag
aagaaatataaaaacgctaaagaagttttctgggtacaagaagagccagaaaacatgggg
gcatggccatatctgttccgtaagttgtacaaaacggctttaaagggcattgatgtaatt
tcgaggagagaaagcagcagtaccgcaacaggttttgcaaaacaacatgctaaccaacag
gcttatattttagcaaaagctttagagatttcggtaacggatgatgtaaaggatattgcc
aaaaaagcaacaaaaaaattagttcagatcgattaa
DBGET
integrated database retrieval system
