Pedobacter riviphilus: H9N25_21965
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Entry
H9N25_21965 CDS
T08657
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
prk
Pedobacter riviphilus
Pathway
prk01501
beta-Lactam resistance
prk01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
prk00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
H9N25_21965
01503 Cationic antimicrobial peptide (CAMP) resistance
H9N25_21965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
prk03036
]
H9N25_21965
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prk02000
]
H9N25_21965
01504 Antimicrobial resistance genes [BR:
prk01504
]
H9N25_21965
Chromosome and associated proteins [BR:
prk03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
H9N25_21965
Transporters [BR:
prk02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
H9N25_21965
Antimicrobial resistance genes [BR:
prk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
H9N25_21965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
HH_MFP_RND
RND-MFP_C
BSH_CusB
BSH_CzcB
YknX_C
BSH_YknX
Biotin_lipoyl
HH_EMRA
HH_AAEA_pHBA
Beta-barrel_RND_2
HH_AprE
HH_CzcB
Motif
Other DBs
NCBI-ProteinID:
QNR87232
UniProt:
A0ABX6TNQ4
LinkDB
All DBs
Position
complement(5325624..5326763)
Genome browser
AA seq
379 aa
AA seq
DB search
MSIGMLLASCGNNDAAKKAAAAAAAGPQAYPVFTVNTQNTTLDSDYPATIEGIQNIDIRP
KVDGFIEKILVDEGAVVKKGQLLFTINAPQYEQQVRTARAAISSAEADVNAAQLTVNKTR
PLVEKDIISKYDLDAAQLTLQSRKAALAQAKAELVNAQVNLGYTSVKSPVDGVVGSIPFR
NGSLVSSSSTQPLTTVSNTSKVYAYFSLNEKQLLDFSNTYKGNTLAQQMKNIPPVSLVLA
DGTIYAQNGKIESINGQINTSTGSASLRATFPNPAFLLKNGASASVRIPQHVENAILIPQ
KSTIDLQGKKFVYILGDSAKVINTQIEVMELAKGNFYVVTKGLKVGDKVILEGFQSLKDG
TKIKPEVKNTDSVYAEIKK
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgagcattggtatgcttttggcatcctgcggaaataacgatgcagctaaaaaagctgcc
gctgcagcagcagccggtccacaggcttaccctgtatttacagtaaacacacaaaacaca
accttagattctgattatccagcaacaattgagggtattcaaaacatcgatatccgtccg
aaagttgatggttttatcgaaaaaatattagtggatgaaggtgcggtagttaaaaaaggt
cagttactttttaccattaatgcaccacagtacgaacagcaggtacgcacagcaagagct
gccattagcagtgcagaagcagatgttaatgcagcccagttaacagtaaataaaaccagg
cctttggtagaaaaagacatcatcagcaagtatgatcttgatgctgctcaattaacactc
caaagcagaaaagcggcattggcacaggcaaaagccgaattggtaaatgcacaggttaat
ttggggtatacttcggttaaaagcccagttgatggtgttgttggcagtatccctttcaga
aatggaagtttagtgagcagtagcagcacacaaccattaactactgtttctaacacttct
aaggtttatgcatatttttctttaaacgagaagcagcttttagatttttctaacacctac
aaaggcaacacacttgcacagcaaatgaaaaacattcctccggtaagtttagttcttgcc
gatggaacaatctatgcacaaaacggcaaaatcgaatccatcaacggacagattaacacc
agtactggttcggcaagtttaagggcaacattccctaatccggctttcttattaaaaaat
ggtgcaagtgcatccgttagaattcctcaacatgttgaaaatgcaattctgatccctcaa
aaatcgacgatcgatttacagggtaaaaaattcgtttacattttaggtgattcggccaag
gtgattaatactcaaattgaggtgatggaattggccaaaggtaatttctacgtagttacc
aaagggcttaaagtaggcgataaagttattttagaaggctttcaatctttaaaagacggg
actaaaattaaacctgaagtaaaaaacaccgattcagtttatgctgaaataaaaaaataa
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