Protaetiibacter sp. SSC-01: H4J02_04950 Help Entry H4J02_04950       CDS       T09940                                  Symbol ligA Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism proa  Protaetiibacter sp. SSC-01 Pathway proa03030   DNA replication proa03410   Base excision repair proa03420   Nucleotide excision repair proa03430   Mismatch repair Brite KEGG Orthology (KO) [BR:proa00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     H4J02_04950 (ligA)    03410 Base excision repair     H4J02_04950 (ligA)    03420 Nucleotide excision repair     H4J02_04950 (ligA)    03430 Mismatch repair     H4J02_04950 (ligA)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:proa03032]     H4J02_04950 (ligA)    03400 DNA repair and recombination proteins [BR:proa03400]     H4J02_04950 (ligA) Enzymes [BR:proa01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      H4J02_04950 (ligA) DNA replication proteins [BR:proa03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      H4J02_04950 (ligA) DNA repair and recombination proteins [BR:proa03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      H4J02_04950 (ligA)    NER (nucleotide excision repair)     GGR (global genome repair) factors      H4J02_04950 (ligA)    MMR (mismatch excision repair)     DNA ligase      H4J02_04950 (ligA)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       H4J02_04950 (ligA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 DNA_ligase_ZBD BRCT HHH_5 HHH PTCB-BRCT Nlig-Ia BRCT_2 Motif Other DBs NCBI-ProteinID:  QNO38808 UniProt:  A0A7G9XTV0 LinkDB All DBs Position 1049934..1052249 Genome browser AA seq 771 aa AA seqDB search MDQVPEQTRETLQRAHAEAEALTARIIELREAYYERDTTLVDDAEYDAMMRRLEELERVF PELQSQDSPTQTVGGGVQAGGLDTIQHAERMLSLDNVFSAEELRDWCVKTQTAAGRQVHW LTELKIDGLAINLRYENGVLTSAATRGDGRVGEIVTENALRLADIPERLSGSDHPAIVEV RGEVFIPVKSFEELNALQAELRERVVAEAEQRAAARNAEFDREKAETGAARRFPAFANPR NAASGGLRQQLDKKDGLELEAALARIGSLRLYVHGIGAWPDPPVSAQSEIYDILQGWGLP TTPYSKVSADIDEVLAYVEHYGEHRHDVEHEIDGIVVKVDELALHDELGATSRAPRWAIA YKYPPEQVQTKLLDIVVSVGRTGRATPFAVMQPVRVAGSTVRQATLHNQDVVKAKGVLIG DTVVLRKAGDVIPEVLGPVDELRDGTEREFVMPENCPECGTPLAPAKEGDIDLRCPNARA CPAQVRGRVEHIGSRGALDIEGLGEVSAAALTQAEVGAPLETEAGLFDLTLEQLMPIEVV VRDAETGERKVLPDGSFDVRAPFRKIVQHARKGQDVVEGPSEVAKTLLAELEKAKTKELW RFLVALNIRHVGPVAARALADWFGSLDAIRSASRDELAAVDGVGGIIADAVLDWFAVDWH VEIVERWAAAGVPWATPGHPGPGKAAAVDGPLSGLTIVVTGAMPEHSRDEAQEAVIRAGG KPASSVSKKTDFVVIGPGAGSKATKAADLGLPIVDADDFSRFLAEGPSILG NT seq 2316 nt NT seq  +upstreamnt  +downstreamnt atcgaccaggttcccgagcagacgcgcgagacgctccagcgcgcccacgccgaagccgag gcgctgacggcccgcatcatcgagctgcgcgaggcgtactacgagcgcgacacgacgctc gtcgacgacgcggagtacgacgcgatgatgcgccgcctcgaggagctcgagcgcgtcttc cccgagctgcagagccaggactcgcccacgcagacggtcggcgggggagtgcaggcgggc ggtctcgacaccatccagcacgccgagcggatgctgtcgctcgacaacgtgttctcggcc gaggagctgcgcgactggtgcgtcaagacgcagaccgccgcgggtcggcaggtgcactgg ctcaccgagctcaagatcgacggcctcgccatcaacctgcgctacgagaacggtgtgctc acgtcggcggccacgcgcggcgacggccgcgtcggcgagatcgtgaccgagaacgcgctg cggctcgccgacatcccggagcggctctcgggctccgaccacccggcgatcgtcgaagtg cgcggcgaggtcttcatccccgtgaagtcgttcgaagagctcaacgcgttgcaggccgag ctgcgcgagcgcgtcgtggccgaggccgagcagcgcgccgccgcccggaacgccgagttc gaccgcgagaaggccgagacgggagccgcgcgccgcttccccgccttcgcgaacccgcgc aatgcggcatccggcggtctgcgccagcagctcgacaagaaggacggcctcgagctcgag gcggcgctcgcgcgcatcggctcgctgcgcctctacgtgcacggcatcggcgcgtggccc gacccgcccgtctcggcgcagagcgagatctacgacatcctccagggctggggcctcccc acgacgccctacagcaaggtgagcgccgacatcgacgaggtgctcgcctacgtcgagcac tacggcgagcaccgtcacgacgtcgagcacgagatcgacgggatcgtcgtcaaggtcgac gagctcgccctccacgacgagctcggcgccacgagccgcgcgccccgctgggccatcgcc tacaagtacccgcccgagcaggtgcagacgaagctgctcgacatcgtcgtctcggtcggt cgcacgggccgtgccaccccgttcgccgtcatgcagcccgtgcgggtcgcgggctcgacg gtgcggcaggcgaccctccacaaccaggacgtcgtgaaggcgaagggcgtgctcatcggc gacacggtcgtgctgcgcaaagccggcgacgtgatccccgaggtgctcggccccgtcgac gagctgcgcgacggcaccgagcgcgagttcgtgatgcccgagaactgccccgagtgcggc acccccctcgcccccgcgaaggagggcgacatcgacctgcgctgccccaacgcgcgcgcc tgccccgcccaggtacgcggccgcgtcgagcacatcggctcgcgcggcgcgctcgacatc gagggcctcggcgaggtgagcgccgccgcgctcacgcaggcggaggtcggcgcacccctc gagaccgaggcgggcctcttcgacctcaccctcgagcagctcatgcccatcgaggtcgtc gtgcgcgacgccgagacgggcgagcgcaaggtgctgcccgacggctcgttcgatgtgcgc gccccgttccgcaagatcgtgcagcacgcgcgcaagggtcaggatgtcgtggagggcccg tcggaggtcgccaagaccctgctcgccgagctcgagaaggcgaagacgaaggagctgtgg cgcttcctcgtcgcgctcaacatccgccacgtcgggccggtcgccgcccgcgctctggcc gactggttcggctcgctcgacgcgatccgctccgcgagccgcgacgagctcgcggcggtc gacggcgtgggcggcatcatcgctgacgccgtgctcgactggttcgcggtcgactggcac gtcgagatcgtcgagcgctgggcggccgcgggcgtcccgtgggccacgcccgggcatccg ggaccgggcaaggcggcggccgtcgacggtccgctctcggggctcacgatcgtcgtcacc ggcgcgatgcccgagcactcgcgcgacgaggcgcaggaggccgtcatccgcgccggcggc aagcccgcgtcgagcgtcagcaagaagaccgacttcgtcgtcatcggacccggcgcgggc tcgaaggccacgaaggcggccgacctcggcctgcccatcgtcgacgccgacgacttcagc cgcttcctcgcggaggggccctcgatcctcggttga

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