Phodopus roborovskii (desert hamster): 127215391
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Entry
127215391 CDS
T08852
Symbol
Irf5
Name
(RefSeq) interferon regulatory factor 5
KO
K09446
interferon regulatory factor 5
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
127215391 (Irf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prob03000
]
127215391 (Irf5)
Transcription factors [BR:
prob03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
127215391 (Irf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
127215391
NCBI-ProteinID:
XP_051031775
UniProt:
A0AAU9YUA3
LinkDB
All DBs
Position
Unknown
AA seq
497 aa
AA seq
DB search
MNQPAPGVPPPPRRVRLKPWLVAQVNSCQYPGLQWVNGERKLFYIPWRHATRHGPSQDGD
NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV
CSNGPAPTESQPIDDYAPGEEEEEEEEELQRMLPGLSITEPVLPGPPIAPYSLPKEGVKW
PPALQPSAGLGPPAPDPNLLAHPSGNHAGFGQLLPEDLEPGPLASSQPPTEQLLPDLLIS
PHMLPLTDLEIKFQYRGRPPCALTISNPQGCRLFYSQLEATQEQVELFGPVSLEQVRFPS
PEDIPSAKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCALAHGSHPNPI
QREVKTKLFSLEQFLNELILFQKGQTNIPPPFEIFFCFGEEWPDLKPREKKLITVQVVPV
AARLLLEMFSGELSWSADSIRLQISNPDLKDHMVEQFKELHHIWQSQQRLQPMVQAPPMA
GLGAGQGPWPMHPVGMQ
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagccagccccgggggttcccccaccaccccgacgcgtgaggctgaagccctgg
ttggtggcccaagtgaacagttgccagtacccagggcttcagtgggtcaacggggaaagg
aagctcttctacatcccctggcgacatgccacacggcatggtcccagccaggatggagac
aacaccatcttcaaggcctgggctaaagagacagggaagtacactgagggggtggacgag
gctgacccagccaagtggaaggccaacctgcgctgcgcccttaacaaaagccgtgacttc
cgtctgatctatgacggccctcgagacatgccaccccagccctacaagatctacgaggtc
tgctccaatggccctgcccccacagaatcccagcccattgatgattacgctcctggagaa
gaggaggaggaggaagaggaggagctccagagaatgctgccaggcctgagcatcacagaa
cctgttctacccgggccccccatagcaccctactccttacccaaagaaggcgtcaaatgg
ccacctgctctccagccatctgcagggctgggtccccctgccccagatccaaatctcctg
gcccatccctctggaaatcatgctggcttcgggcagcttctccctgaggacctggagcct
gggccgctggcttccagccagccccctacagaacaactcttgcctgacctgctgatcagc
ccccacatgctgcctttgactgacctggagatcaagttccagtatcgcggtcgtccaccc
tgtgcccttaccatcagcaacccacaaggctgtaggctcttctatagccagctagaagct
acccaggagcaagtggaactcttcggccctgtgagcctggagcaagtgcgcttccctagc
ccagaggacatccccagcgcgaagcagcgtttctatacaaaccagctgctggatgtcctg
gaccgtgggctcatcctccagctgcagggccaggacctgtatgccatccgtctgtgccag
tgtaaggtgttctggagtgggccctgtgccttagcccatggctcacaccccaaccccatc
cagcgggaagtcaagacaaaactcttcagcctagagcagtttctcaacgaactcatcctg
ttccagaagggtcagaccaacattccaccaccttttgagatcttcttctgctttggagaa
gaatggccggacctcaaaccccgagagaagaagctcattactgtacaggtggtaccggtt
gcagcccggttgctattggagatgttctcgggggagctttcctggtcagcagacagcatc
cgtctgcagatctccaacccggacctcaaagaccacatggtggagcagttcaaggagctg
caccacatctggcagtcccagcaacgcttgcagcccatggtccaggcccctcctatggca
ggccttggtgctgggcaagggccctggcccatgcacccagttggcatgcaataa
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