Phodopus roborovskii (desert hamster): 127218390
Help
Entry
127218390 CDS
T08852
Symbol
Scn4a
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
prob04040
]
127218390 (Scn4a)
Ion channels [BR:
prob04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
127218390 (Scn4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
127218390
NCBI-ProteinID:
XP_051035359
LinkDB
All DBs
Position
Unknown
AA seq
1825 aa
AA seq
DB search
MASSSLPTLVPPGPHCLRPFTPESLAAIEQRAVEEEARLQRNKQMEIEEPERKPRSDLEA
GKNLPLIYGDPPPEVIGIPLEDLDPYYSDKKTFIVLNKGKAIFRFSATPALYMLSPFSVI
RRVAIKVLIHALFSMFIMITILTNCVFMTMSNPPSWSKDVEYTFTGIYTFESLIKMLARG
FCIDDFTFLRDPWNWLDFSVITMAYVTEFVDLGNISALRTFRVLRALKTITVIPGLKTIV
GALIQSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRQKCVRWPPPMNDTNTTWYGNDTW
YSNDTWYSNDTWSSQESWASNYTFDWDAYINDEGNFYFLEGSNDALLCGNSSDAGHCPEG
YQCIKAGRNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIFFVVIIF
LGSFYLINLILAVVAMAYAEQNEATLAEDQEKEEEFQQMLEKFKKHQEELEKAKAAQALE
GGEADGDPAHSKDCNGSLDTPGEKGPPRPSCSADSAISDAMEELEEAHQKCPPWWYKCAH
TVLIWNCCAPWVKFKHIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLTVG
NLVFTGIFTAEMVLKLIAMDPYEYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRL
LRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKI
ASDCSLPRWHMHDFFHSFLIVFRILCGEWIETMWDCMEVAGQAMCLTVFLMVMVIGNLVV
LNLFLALLLSSFSADSLAASDEDGEMNNLQIAIGRIKWGISFVKAFLLGLLHGKILRPKD
IMLSLGEPGGAEETGDDALEDEKKEPLPEDGNKELKDNHILNHLGLADGPRSSIELEHLN
FINNPYLTIQVPIASEESDLEMPTEEETDTFSEPEDIKKPLQPLYDGNSSVCSTADYKPP
EEDPQEQAEENPDGELPEECFTEACVQRCPCLYVDISQGRGKMWWTLRRACFKIVEHNWF
ETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFILEMLLKWVAYGFKVYF
TNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVNAL
LGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERFDISVVNNKSECESLM
HTGQVRWMNVKVNYDNVGLGYLSLLQVATFKGWMDIMYAAVDSREKEEQPHYEVNIYMYL
YFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYNAMKKLGSKKPQK
PIPRPQNKIQGMVYDFVTKQVFDISIMILICLNMVTMMVETDDQSQLKVDILYNINMVFI
IIFTGECVLKMFALRHYYFTIGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLA
RIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFAYVKKESGI
DDMFNFETFGNSIICLFEITTSAGWDGLLNPILNSGPPDCDPTLENPGTNIKGDCGNPSI
GICFFCSYIIISFLIVVNMYIAIILENFNVATEESSEPLSEDDFEMFYETWEKFDPDATQ
FIDYSRLSDFVDTLQEPLKIAKPNKIKLITLDLPMVPGDKIHCLDILFALTKEVLGDSGE
MDALKQTMEEKFMAANPSKVSYEPITTTLKRKQEEVCAIKIQRAYRRHLLQRSVKQASYM
YRHSQDGNEDGAPEKEGLLANTMNKMYGPENENIGVQSQGEEEKGSVGDAGPTMELKPTS
PLNTALPPSAPQGQTVRPGVKESLV
NT seq
5478 nt
NT seq
+upstream
nt +downstream
nt
atggccagctcatctctgcccaccctggtacccccgggcccccactgcctgcgtcccttc
accccagagtccctggcagccatagagcagcgggcagtggaggaagaggcccggctgcag
cggaataagcagatggagattgaggagcctgagcggaagccacgtagtgacctggaagct
ggcaagaacctaccgctcatctatggggaccccccacctgaagtcatcggcatcccgctg
gaggacctggacccttactacagtgacaagaagaccttcattgtgctcaacaaaggcaag
gccattttccgcttctctgccacgcctgccctctacatgctgagccccttcagcgtcatc
aggcgcgtggctatcaaggtgcttatccacgcgctgttcagcatgttcatcatgatcacc
atcttgaccaactgcgtgttcatgaccatgagcaacccgccttcttggtccaaggatgtg
gagtacaccttcacagggatctacaccttcgaatctctcattaagatgttggcccgaggt
ttctgcattgatgacttcacattcctccgggacccctggaactggctggacttcagtgtc
atcacgatggcgtatgtgacagagtttgtggacttgggtaacatctcagccctgaggacc
ttccgtgtgctgcgggccctgaaaaccatcacggttatcccagggctgaagaccattgta
ggagccctaatccagtcagtgaaaaagttgtccgatgtgatgatcctcaccgtcttctgc
ctgagtgtctttgccctggtggggcttcagctcttcatgggaaacctgcggcagaagtgt
gtgcgctggcccccgcccatgaatgacaccaacaccacatggtatggtaatgacacgtgg
tacagcaatgacacgtggtacagcaacgacacttggagcagccaggagagctgggccagc
aactatacctttgactgggatgcctacatcaatgacgaagggaacttctacttcctggag
ggctccaatgatgccctgctctgtgggaatagcagtgacgccgggcactgccccgaagga
tatcaatgcatcaaggctgggcggaaccccaactatggctacaccagctacgacaccttc
agctgggccttcctagctctcttccgtctcatgacacaggactactgggagaaccttttc
cagctgactcttcgagctgctggcaagacctacatgatcttctttgtggtcatcatcttc
ctgggttccttctacctcatcaatctgatcctggcggtggtggccatggcgtatgctgag
cagaatgaagctaccctggctgaagatcaggagaaagaagaggagttccaacagatgctt
gagaaattcaaaaaacatcaggaggagttagaaaaggctaaggctgctcaggctctggaa
ggcggggaggcagacggggacccagcccacagcaaagactgcaatggcagcctagacaca
cccggggagaaggggcccccaaggccaagctgcagcgcagatagtgccatctcagatgct
atggaggagctggaggaggctcaccagaagtgcccaccgtggtggtacaagtgtgcgcac
acagtgctcatctggaactgctgtgccccgtgggtgaagttcaaacacatcatccacctg
attgtcatggaccccttcgtggacctaggcatcaccatctgcatcgtgctcaacaccctc
ttcatggccatggagcactaccccatgaccgagcactttgacaacgtgctcactgtgggc
aacttggtcttcacgggcattttcactgcagagatggtgctgaagttgatcgccatggac
ccctatgagtatttccaacagggctggaacatcttcgacagcttcattgtcaccctcagc
ctggtagagctgggcctggccaacgtgcaggggttatctgtgctccgctccttccgtctg
ctgcgtgtcttcaagctggccaagtcatggccaacactcaacatgctcatcaaaatcatt
ggcaactcagtgggtgcgctgggcaacctgacgctggtgctggccatcatcgtcttcatc
ttcgctgtggtgggcatgcagctgtttggcaagagctacaaggaatgtgtgtgcaaaatt
gcctcggactgcagcctgccccgctggcacatgcacgatttcttccattccttcctcatc
gtcttccgcatcctctgtggggaatggatcgagaccatgtgggactgcatggaggtggct
ggccaggccatgtgccttactgtcttcctcatggtcatggtcattggcaacctggtggtc
ctgaatctgttcctggctctcctgctgagttccttcagtgctgacagcctggcagcttca
gatgaagatggcgagatgaacaacctgcagattgccattgggcgcatcaagtggggcatc
agttttgtcaaagccttcctcctgggcctgttgcatggcaagatcctgcgccccaaggac
ataatgctcagccttggtgagcccggtggtgctgaggagactggggacgatgctctggaa
gatgagaagaaggaaccactaccagaagatgggaacaaggaactgaaggacaatcacatc
ctgaaccacctgggcctggccgacggccctcgctccagcatcgagctggagcatctcaac
ttcatcaacaacccctacctcaccattcaggtgcccattgcctctgaggagtccgacctg
gagatgcccacagaggaggagactgatacgttctcggagcctgaggacatcaagaagcca
ctacagcccctttacgatgggaactcctccgtctgcagcacggctgactacaagccccct
gaagaggacccccaggagcaggctgaggagaaccctgacggggagctgcctgaggaatgc
ttcaccgaggcttgtgtgcaacgctgcccctgcctctatgtggacatctcccagggccgt
gggaaaatgtggtggacgctgcgccgggcctgtttcaagatcgttgagcacaactggttt
gagaccttcattgtcttcatgatcttgctcagcagtggtgccctggccttcgaggacatc
tatattgagcagcggcgtgtcatccgcaccatcctggaatatgctgacaaggtcttcacc
tacatcttcatcctggagatgctgctcaagtgggtggcctacggcttcaaggtgtacttc
accaatgcctggtgctggctcgatttcctcatcgtggatgtctccatcatcagtctggtg
gccaactggctgggctactcagagctgggacccatcaaatccctgcgcacactgcgggcc
ctgcgtcccctgagggcactgtcacggtttgagggcatgagggtggtggtgaacgccctc
ctgggagccatcccctccatcatgaatgtgctccttgtgtgcctcatcttctggctcatc
ttcagcatcatgggggtcaacctgttcgctggaaagttctactattgcatcaacacaacc
acctctgagaggtttgacatctctgtggtcaacaacaagtctgagtgtgaaagcctcatg
cacacaggccaggtccgctggatgaatgtcaaggtcaactatgacaacgtgggtctgggc
tatctctccctccttcaggtggccactttcaagggttggatggacatcatgtatgcagct
gtggactcacgggagaaggaggaacagccacactatgaggtgaacatctacatgtacctt
tacttcgtcatcttcatcatctttggctccttcttcacgctcaatctcttcatcggtgtc
atcatcgacaacttcaaccaacagaagaagaagtttggagggaaggacatcttcatgacg
gaggaacagaagaagtactacaatgccatgaagaagctgggctccaagaagccccagaag
cccattccccgccctcagaacaagatccagggcatggtgtacgacttcgtgacaaagcag
gtgtttgacatctccatcatgatcctcatctgccttaacatggttaccatgatggtggag
acggacgaccagagccagctcaaggtggacatcctgtataacatcaacatggtcttcatc
atcatcttcacaggggagtgcgtgctcaagatgtttgcactgcgtcattactatttcacc
attggctggaatatcttcgacttcgtggttgtcatcttgtccatcgtgggcctcgcgctt
tctgacttgatacagaaatattttgtgtcacccacgctgttccgtgtgatccgcttggca
cggatcgggcgagtcttgcgtctgatccgtggggctaagggcatccggacgctactgttt
gccctcatgatgtcactgcctgcccttttcaacatcggcctcctcctctttttggtcatg
ttcatctactccatcttcggcatgtccaactttgcctatgtcaagaaggagtcaggcatc
gatgacatgtttaactttgagacctttggcaacagcatcatctgtctctttgagatcacc
acatcagctggctgggatgggcttctgaaccccatcctcaacagtgggcccccagattgc
gacccgacactggagaacccaggcaccaacatcaagggtgactgcggtaacccatccatt
ggcatctgtttcttctgtagctacatcatcatttccttcctcattgtggtcaacatgtac
atcgccatcatcctagagaatttcaacgtggccactgaggagagcagtgagcccctcagt
gaggatgactttgagatgttctatgagacctgggagaagttcgaccctgatgccactcaa
ttcatcgactacagccgcctctctgactttgtagacaccttgcaagagccactgaaaatc
gccaagcctaacaagatcaagcttatcacattagacctgcccatggtgccgggggacaag
atccactgcctggacatcctctttgccctgaccaaagaggtactgggtgactctggggag
atggatgcccttaagcagaccatggaggagaagtttatggcagccaacccctccaaggtc
tcctatgagcccatcaccaccactctcaaaaggaagcaggaggaggtgtgtgctatcaaa
atccagagggcctaccgccgccacctgctgcagcgctctgtgaaacaggcctcctacatg
taccgccacagccaggatggcaatgaagacggagcccctgagaaggagggattgcttgcc
aacaccatgaacaagatgtatggccctgagaatgagaacattggtgtgcagagccagggg
gaggaggagaagggctctgtaggagatgctggacccaccatggagctcaaacccaccagc
cccttgaacactgcactaccaccatcagcaccacaggggcagactgtgcgcccaggggtc
aaagagtctcttgtctag
DBGET
integrated database retrieval system
