Phodopus roborovskii (desert hamster): 127218976
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Entry
127218976 CDS
T08852
Symbol
Nlrp1
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
127218976 (Nlrp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
prob04131
]
127218976 (Nlrp1)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
prob04054
]
127218976 (Nlrp1)
Membrane trafficking [BR:
prob04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
127218976 (Nlrp1)
Pattern recognition receptors [BR:
prob04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127218976 (Nlrp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
FIIND
UPA-FIIND
NLRC4_HD2
CARD
NOD2_WH
LRR_6
AAA_16
NPHP3_N
nSTAND_NTPase4
AAA_22
nSTAND3
NB-ARC
AAA_30
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
127218976
NCBI-ProteinID:
XP_051036060
LinkDB
All DBs
Position
Unknown
AA seq
1199 aa
AA seq
DB search
MEDQPELVGATEEAQHKGQQASDTTHDKRKQKELEMQQTKAKAEKDLILRYSTPYKYPFI
GEHVSPVMKLGYEAWRSMTISDMQRRERRKNLYHSELWKTKDFLQNFTKLLLLKKSYPRR
WETLVRKSWHKSKGEKTEHLIEIQDLFHPTPDTKEKPQLVILEGAAGIGKSTLARWVRRA
WEEGQLYRDHFQHVFYFSCRELAQCKQLSLAGLIAKDQAMPTAPIRKILSHPEKLLFILD
GIDEPMWVLQEMNPEFCLHWSQPQPLHTLLGSLLGKSVLPEASLLLTARTTDLQKFIPSL
GQPRWVEVLGFSESGWKEYFRKYFLKEREATAAFSLVESNPVLSTLCAVPWVSWLVCTCL
KQQMEQGRDLSLTSQTTTALCLKYLSQTLQGCALGTHLRKLCSLAAEGIWRRRTQFRDID
LRIRGLPGDVIATFLKRGVLQKQPNSLSYSFAHFCLQEFFAAMSYILENNVPGHDYIDSC
RIVERLKDIYGRYDLFEVPTVRFLCGLLSKQGIREIEKIFTCTLSWEIKLNLRWHILEEA
LCHQPYSLGLLHCLYEIQDKEVLTEVMHTYQGAGVNAPMDMKHPVLQSNVKHLVVQTDVD
LMVVTFCIKFCRHVKRLQLDGGEQQEPTLMAHRMVLSRWTPITNASWQVLFSTLEFTGSL
EELDLSGNPLSCFAVQNLCKTLRCPGCQLKTLWLVNCGLMSRHCADLTSVLKASSSLTEL
DLQLNDLGDDGVRLLCEELRNPACNLRILRLDQAPLSDQVMMELRALESENPQLLISSTW
KPPVMVPTKNPDEEEVGDSLTSFKYQRLQSGHKYMKPLGTKDDFWGPTGPVATEVIDREK
NLYRVQFPMPGSYHCPNIGLHFVVTRAVTIEIGFCAWTQYLDQTHLRHRHMVAGPLFDIK
AEQGAVAAVYLPHFVALQEGQVDISWLQVAHFQEHGMTLETPARVEQNYTVLENPSFSPM
GVLLRMIPAVRHLIPITSITLIYYHLNLKEVTLHLYLIPNDCTIRKAIDDEEMKFQFVRI
NKPPPQDTFYIGSRYIISGSEKLEIMPRELVLCYRSPRESQLFSEIYIGYMDSKIKLQIQ
DKKHKNIIWETLLKPGDLRPAQFMIPAAHKDAPALLHFVDQHREQLVARVTSVDPLLDKL
HSLVLSEGEYEAVRAEATNQDKMRKLFSLSRSWTRSCKDQVYRALEETHPHLVMDLLDK
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atggaagatcagcccgagttggtgggtgccactgaggaggctcagcataagggtcagcag
gcctcagacaccacccatgacaagaggaagcagaaggagctggagatgcagcagaccaaa
gccaaggcagagaaggacttgatactaagatactcaacaccctacaagtatccctttatt
ggcgaacacgtatccccagtaatgaagttaggctatgaagcttggagatcaatgacaata
tcagacatgcaacggagagaaagaagaaagaacctttaccacagtgagttgtggaaaaca
aaggatttcctccaaaatttcacaaagctactacttctgaaaaaatcttatccaagaagg
tgggagaccttggtcagaaaaagctggcataaaagtaaaggagaaaagacagaacatctg
attgagatccaagacttatttcacccaactccagataccaaggaaaagcctcagttagtc
atattagagggagctgctgggattgggaagtccacgctggccaggtgggtgaggagagcc
tgggaggaaggccagctctacagagatcacttccagcatgtcttctacttcagctgcaga
gagctggcccaatgcaagcagctgagtctggctgggctcatagcaaaagaccaggctatg
cctacagctcccatcagaaagatcctgtctcaccctgagaagctgctattcatcctggat
ggcatagatgagccaatgtgggtcctgcaagagatgaatcctgagttctgtctgcactgg
agccagccacagcctctgcacacactgctgggcagtttgctggggaaatctgtcctgcct
gaggcttccttgctgctcacagctcggaccacagatctacaaaagttcattccttctttg
gggcagccacgttgggtggaagtcctgggtttctctgaatctggatggaaggaatatttc
agaaaatattttttaaaggaaagagaagcaactgcagcttttagcttggttgaatcaaac
ccagtgctctccacactgtgtgcggtgccctgggtgtcttggctggtctgcacttgcctg
aagcagcagatggaacaaggaagagatctctcactgacctcacagaccaccacagcactc
tgcctgaaatacctttcccagactcttcaaggttgtgccctaggaacccatctcagaaag
ctgtgctcactggctgctgaggggatctggagaagaaggacccagttcagagatatagat
cttaggatccgaggattacctggtgatgtcattgccactttcctgaagaggggtgtcctt
caaaagcagcccaactctctgagttacagctttgcccacttttgtctccaggagttcttt
gcagcaatgtcctacatcttggagaataatgtgccaggacatgattatatagatagttgc
agaattgtggaaagactgaaggacatctatggaagatatgacctgtttgaggtacccact
gtgcgctttctatgtggtcttttgagtaaacagggaattagggaaatagagaagatcttc
acctgcacattgagttgggagataaagctgaacctgaggtggcacatcctggaggaagcc
ctttgccatcaaccatattctctgggtttactccattgtctgtatgagatccaggataag
gaggtcctgacagaagtgatgcacacttatcaaggagcaggtgtgaatgccccaatggat
atgaaacacccagtgctccagtccaatgtgaagcacctggtggtccagacagacgtggac
ctcatggtggtcactttctgcattaagttctgccgccatgtgaagaggcttcagctggat
ggaggtgaacagcaggaaccaacactgatggcccataggatggttctgtccaggtggacc
ccaatcactaatgccagttggcaggttctcttttccactcttgagttcacaggaagcctg
gaggagctggacctaagtggaaacccactgagctgctttgcagttcagaatctctgtaag
accctgagatgccctggctgccaactaaagacattgtggcttgtcaactgtggcctcatg
tccagacactgtgctgacctgacctcggtgctcaaagccagctccagcctgactgagctg
gacctgcagctgaatgacctgggtgatgatggtgtgaggctgctgtgtgaggagctcagg
aatcctgcctgcaacctcagaatcctgcggttggaccaggcccctctcagtgaccaggtg
atgatggagctcagggccctggagtcagagaatccacagctgctcatctctagcacatgg
aagccgcctgtgatggtccctactaagaacccagatgaagaagaagtgggtgatagcctg
acctcattcaagtatcagagactacagtcaggacacaagtacatgaaaccactggggact
aaagatgacttctggggccctacagggcctgtggctactgaagtgattgacagagagaag
aacctgtaccgagttcaatttcccatgcctggttcctaccactgtcccaacataggactc
cactttgtggtgacaagggcagtgacaatcgagattggattctgtgcctggacccaatac
ctggaccagactcacttgcgacacaggcacatggtggctgggcctctgtttgacatcaag
gctgagcagggagctgtggctgctgtgtacctccctcattttgtggctctccaagagggt
caggtggacatctcctggctccaagtggcccactttcaagaacatgggatgaccctagaa
actccagccagggtggagcagaactacacagtactggaaaacccaagcttctccccaatg
ggagttctactgaggatgatccctgctgtcagacacctcatccccatcacttccatcaca
ttgatctactatcacctcaatctcaaggaagtcacccttcatctgtacctgatccccaat
gactgcaccattcggaaggccattgatgatgaagaaatgaaattccaatttgtgcgaata
aataagccaccccctcaagacacgttttacatcggctcacgctacatcatttctggttct
gagaaactggaaatcatgccaagggaactggtattgtgctacaggagccccagggaatcc
cagctcttctctgagatctatattggctacatggattcaaagattaagctgcaaatccaa
gacaagaaacataagaatatcatatgggaaaccttgctgaaaccaggagacctcagacct
gcacagttcatgatccctgcagcccacaaagatgctccagccttgctacactttgtggac
cagcatcgagagcagctggtggcccgagtgacatcggtggaccctctcttggacaagctt
catagtctggtgctgagtgaaggggagtatgaggcggtgcgggctgaagccaccaaccaa
gacaagatgaggaagctcttcagcctcagccggtcctggaccaggtcctgcaaagaccaa
gtctaccgagctctggaggagacccatcctcacctggtcatggacctccttgacaagtag
DBGET
integrated database retrieval system
