Phodopus roborovskii (desert hamster): 127219184
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Entry
127219184 CDS
T08852
Symbol
Smcr8
Name
(RefSeq) guanine nucleotide exchange protein SMCR8
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04140
Autophagy - animal
prob05014
Amyotrophic lateral sclerosis
prob05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127219184 (Smcr8)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
127219184 (Smcr8)
05022 Pathways of neurodegeneration - multiple diseases
127219184 (Smcr8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
prob04131
]
127219184 (Smcr8)
Membrane trafficking [BR:
prob04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
127219184 (Smcr8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCR8_C
Folliculin
Motif
Other DBs
NCBI-GeneID:
127219184
NCBI-ProteinID:
XP_051036448
UniProt:
A0AAU9Z2B8
LinkDB
All DBs
Position
Unknown
AA seq
934 aa
AA seq
DB search
MISAPDVVAFTKEDEYEEEPYNEPALPEEYSVPLFPYASQGANPWSKLSGAKFSRDFILI
SEFSEQVGPQPLLTIPNDTKVFGTFDLNYFSLRIMSVDYQASFVGHPPGSAYPKLNFVED
SKVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISADQHKIMQQFQELSAEFSKAS
ECLKMGNRKAFAGELEKKLKDLDYTRTVLNTETEIQKKANDKGFYTSQAIEKANELANVE
KSIIEHQDLLRQIRSYPRQKMKIPDLHPGDTEHTQDQADQVSTTSNPEESADADLYTRRP
AYTPKLIKAKSTKCFDKKLKTLEELCDTEYFTQTLAHLSHIEHMFRGDLCYLLTSQIDRA
LRKQQHITNFLFEDFVEADDRMEKQENVPSQPSQDRLPSRPVEECPIPKVLISVGSYKSS
VESVLIKMEQELGDDEYKEVEATESSGFDLQENLDYLDMDMKGSISSGESIEVLGTEKSS
SVLSKSDSQASLTVPMSPHVVRSKAVSHRTISEDSIEVLSTCPSEALIPDDFKASYPSAI
NEEETYADDEGAIHFQASVSPPELGETQEGSLENTPSQIDSSCCIGKESEGLMIPLPTAA
YTLSDEDGVVSIPPQRYRQKDQGIHVDIMMENTDPSQDNSCEMFPANELNPGCLLASRDV
SKTSLDNYSDTTSYMGSVASTSSDRIPSAHSASLSSERHKKRAGQNALKFIRQYPFAHPA
IYSLLSGRTLVVLGEDETIVRKLVAALSIFVPSYGYYAKPVKHWISSPLHIMDFQKWKLI
GLQRVASPASMGTLHTLSRYSRYTSILDLDSKTLRCPLYRGTLVPRLADHRTQIKRGSTY
YLHVQSMLTQLCSKAFLYTFCHHLHLPAHSEETQEAVASRQTSFLKLNLGLVNEDIKVVQ
YLAELLKLHYMRESPGTTHPLLRFDYVPSFLYKI
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcgcccctgatgtggtggccttcaccaaggaagacgagtacgaggaagagcct
tacaatgagcccgccttgccagaggagtactcggtccctctcttcccctatgccagccag
ggggctaacccctggtctaaactgtccggggccaagttctccagggacttcatccttatt
tccgagttctctgagcaggtgggacctcagcctttgctgactatccccaatgacaccaaa
gtttttggcacttttgatctcaattacttctccttgcggatcatgtcagtggattaccag
gcttcattcgtaggtcatcctcctggttctgcctacccgaagttgaactttgtggaggac
tccaaagtggtactgggagactctaaggaaggggcctttgcatatgtgcaccaccttacc
ttgtatgacctggaggcccgtggctttgtgaggcccttttgtatggcttatatatctgca
gaccagcataaaatcatgcagcaattccaggagctttcggctgaattttccaaagcatct
gagtgcttgaagatgggtaacaggaaggcatttgccggggaacttgaaaaaaagctgaaa
gacttggattacacaaggacagtgctgaacacagaaactgagatccagaagaaagccaat
gacaaaggtttttatacatctcaggcaattgagaaagccaatgaactggccaatgtggag
aagtccatcattgagcatcaagatttgttgaggcagatccgctcataccctcgtcagaag
atgaagatacctgatttgcatcctggtgatacggagcatacccaagatcaggctgaccag
gtatccactacctctaaccctgaggagtcagctgatgcagacctttatacccgcagacca
gcttacaccccaaaactcatcaaagcaaagtccaccaagtgttttgacaagaagttgaag
accttggaggaactctgtgacactgagtatttcactcagaccctggcccaccttagccac
attgaacacatgttcagaggggacttgtgctacctcctgaccagtcagattgacagagca
cttcgaaaacaacagcacataacaaatttcctctttgaggactttgtggaggctgatgac
aggatggagaaacaagagaatgtgccctctcagcccagtcaggataggctgccttccagg
cctgtggaagaatgccccattcctaaagtgttaattagtgttggttcttacaagtccagt
gtggagtctgtgttgatcaagatggagcaggaacttggagatgacgagtacaaggaagtg
gaggcaacagaatcgagcggttttgacctccaagaaaacctggactacctggacatggat
atgaaagggagcatcagcagtggggagagcatcgaggttctgggcacagagaagtcatcc
tctgtgctgtctaaatctgacagtcaggccagcctcacagtgccgatgagtccccatgtc
gtccgtagcaaggcagtcagccacaggacaattagtgaggacagtattgaagtcttaagc
acctgcccatcggaggccctcattcctgatgactttaaggccagctacccaagtgccatt
aatgaggaagaaacctatgcagatgatgagggggccatccatttccaggcaagtgtcagc
ccaccagaactgggtgagactcaggagggcagcttggaaaataccccatcccaaatagac
tctagctgctgtattggaaaggagagtgaaggtctgatgattcctcttcccaccgcagct
tacactctctctgatgaggatggtgtggtgagcatccccccacagcgctacaggcagaag
gaccaggggatccatgtggacatcatgatggaaaacactgatccttcccaagacaacagt
tgtgaaatgttccctgctaatgagctgaatccaggctgccttctggctagccgagatgtt
agtaagacgagcctggataactattcagataccacaagctacatgggtagtgtggcctcc
accagctcagacagaatcccctctgctcactctgctagcctatcctctgagagacacaaa
aagagagctggccagaacgccttaaaattcatccgccagtacccttttgcccacccagcc
atctactccctacttagtgggaggacacttgtggtcctgggcgaagatgaaaccatagtc
aggaagcttgtagccgcactgtccatctttgttcccagctatggctactatgccaagcca
gtgaagcactggatttcctcccctttgcatattatggattttcagaagtggaagcttatt
ggcctacagagggtggcctcccctgccagtatgggaaccctccataccctgagccgttac
agccgctatacaagcatcctggacctggacagcaagaccctccgctgccccctgtacagg
ggtacactggtgccccgcctggctgaccatcgcactcagatcaagcggggcagcacatac
tacctacatgtccagagcatgctcacccagctttgctccaaggcattcctgtacaccttc
tgccatcacctacacctgcctgcccacagtgaggagacacaagaagccgtggccagcaga
caaaccagcttcctaaagctcaacctgggactagtgaatgaggacatcaaggtggtgcag
tacctggctgagctgttgaaactgcactacatgcgggagtcacctgggaccacccacccc
ctgctcaggtttgactatgtccccagctttttgtacaaaatctaa
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