Phodopus roborovskii (desert hamster): 127219353 Help Entry 127219353         CDS       T08852                                  Symbol Sqstm1 Name (RefSeq) sequestosome-1 isoform X1   KO K14381   sequestosome 1 Organism prob  Phodopus roborovskii (desert hamster) Pathway prob04137   Mitophagy - animal prob04140   Autophagy - animal prob04217   Necroptosis prob04218   Cellular senescence prob04380   Osteoclast differentiation prob05014   Amyotrophic lateral sclerosis prob05022   Pathways of neurodegeneration - multiple diseases prob05418   Fluid shear stress and atherosclerosis Brite KEGG Orthology (KO) [BR:prob00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     127219353 (Sqstm1)    04137 Mitophagy - animal     127219353 (Sqstm1)   09143 Cell growth and death    04217 Necroptosis     127219353 (Sqstm1)    04218 Cellular senescence     127219353 (Sqstm1)  09150 Organismal Systems   09158 Development and regeneration    04380 Osteoclast differentiation     127219353 (Sqstm1)  09160 Human Diseases   09164 Neurodegenerative disease    05014 Amyotrophic lateral sclerosis     127219353 (Sqstm1)    05022 Pathways of neurodegeneration - multiple diseases     127219353 (Sqstm1)   09166 Cardiovascular disease    05418 Fluid shear stress and atherosclerosis     127219353 (Sqstm1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:prob04131]     127219353 (Sqstm1)    03029 Mitochondrial biogenesis [BR:prob03029]     127219353 (Sqstm1)   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:prob04147]     127219353 (Sqstm1) Membrane trafficking [BR:prob04131]  Autophagy   Mitophagy    Cargo receptors     127219353 (Sqstm1)   Pexophagy     127219353 (Sqstm1)   Aggrephagy     127219353 (Sqstm1)   Xenophagy     127219353 (Sqstm1)   ER-phagy    ER-phagy recepters     127219353 (Sqstm1)   Other autophagy associated proteins    Midbophagy     127219353 (Sqstm1) Mitochondrial biogenesis [BR:prob03029]  Mitochondrial quality control factors   Mitophagy factors    Parkin-dependent mechanism factors     127219353 (Sqstm1) Exosome [BR:prob04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    127219353 (Sqstm1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  UBA_5 PB1 ZZ Motif Other DBs NCBI-GeneID:  127219353 NCBI-ProteinID:  XP_051036774 UniProt:  A0AAU9Z2X5 LinkDB All DBs Position Unknown AA seq 448 aa AA seqDB search MASLTVKAYLLGKEEAAREIRRFSFCFSPEPEAEAEAAAGPGPCERLLSRVASLFPALRP GGFQAHYRDEDGDLVAFSSDEELTMAMSYVKDDIFRIYIKEKKECRRDHRPPCGQEASRS MVHPNVICDGCNGPVVGTRYKCSVCPDYDLCSTCEGKGLHREHSKLIFPNPFGHLSDGFS HGRWLRKLKHGHFGWPGWEMGPPGNWSPRPPRAGDARPHPAAESASGPSEDPSVNFLKSV GESVAAALSPLGIEVDIDVEHGGKRSRLTPTSPESSNMDTEDKCSTQDKCSTQPSSCSSE VNKPDEAGEGTSQALTEQMKKIVLESVGQPEEQMESDNCSGGDDDWTHLSSKEVDPSTGE LQSLQMPESEGPSSLDPSQEGPTGLKEAALYPHLPPEADPRLIESLSQMLSMGFSDEGGW LTRLLQTKNYDIGAALDTIQYSKHPPPL NT seq 1347 nt NT seq  +upstreamnt  +downstreamnt atggcgtcgctcaccgtgaaggcctatcttctgggcaaggaggaggcggcccgcgagatc cgccgcttcagcttctgctttagtccggagcccgaggcggaagccgaggccgcggcgggc ccagggccctgcgagaggctgctgagccgggtggcctcgctgttccccgcgctgcggcct ggcggcttccaggctcactaccgcgatgaggatggggacttggttgccttttccagtgat gaggagctgacaatggccatgtcctatgtgaaagatgacatcttccgcatctacattaaa gagaagaaggagtgccggcgggaccatcgcccaccgtgtggtcaggaggcatcccgaagc atggtgcatcccaatgtgatttgtgatggttgcaatgggcctgtggtgggaacccgctac aagtgcagtgtgtgcccagactacgacctgtgcagcacctgcgaggggaagggcctacac agggagcacagcaagctcatctttcccaacccttttggccacctctctgatggcttctct catggccgctggcttcggaagctgaaacatggacattttggatggcctggctgggagatg ggtccaccggggaactggagcccacgtcctcctcgagcaggggatgctcgccctcacccc gcagctgaatcagcttctggtccatcagaggatcccagtgtcaatttcctgaagagtgtg ggggagagtgtggcagccgccctcagccctctaggcattgaggttgatattgatgtggaa catggagggaagagaagccgcctgacacccacctccccagaaagttccaacatggacaca gaagacaagtgcagcactcaagacaagtgcagcactcagccaagcagctgctcttcagaa gtcaacaaacctgacgaggcaggcgagggcacttcacaggctctgacagagcaaatgaaa aagatcgtcttggagtcagtgggacagccagaggaacagatggagtctgataactgctca ggaggagatgacgactggacacatttgtcttccaaagaagtggacccatccacaggtgaa ctccagtctctacagatgccagaatcagaagggccaagttctctagacccttcacaggaa ggacccacagggctgaaggaagcggccttgtacccacatctcccaccagaggctgatccc cggctgatcgaatcactctctcagatgctgtccatgggcttctctgatgaaggtggctgg ctcacaaggctcctacagaccaagaattacgacattggagctgcactggacacaatccag tattcaaagcaccctccgccattgtga

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