Phodopus roborovskii (desert hamster): 127222603
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Entry
127222603 CDS
T08852
Symbol
Traf2
Name
(RefSeq) TNF receptor-associated factor 2 isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04010
MAPK signaling pathway
prob04064
NF-kappa B signaling pathway
prob04071
Sphingolipid signaling pathway
prob04137
Mitophagy - animal
prob04141
Protein processing in endoplasmic reticulum
prob04210
Apoptosis
prob04217
Necroptosis
prob04380
Osteoclast differentiation
prob04621
NOD-like receptor signaling pathway
prob04622
RIG-I-like receptor signaling pathway
prob04657
IL-17 signaling pathway
prob04668
TNF signaling pathway
prob04920
Adipocytokine signaling pathway
prob04932
Non-alcoholic fatty liver disease
prob05010
Alzheimer disease
prob05014
Amyotrophic lateral sclerosis
prob05016
Huntington disease
prob05017
Spinocerebellar ataxia
prob05022
Pathways of neurodegeneration - multiple diseases
prob05132
Salmonella infection
prob05135
Yersinia infection
prob05160
Hepatitis C
prob05163
Human cytomegalovirus infection
prob05167
Kaposi sarcoma-associated herpesvirus infection
prob05168
Herpes simplex virus 1 infection
prob05169
Epstein-Barr virus infection
prob05170
Human immunodeficiency virus 1 infection
prob05200
Pathways in cancer
prob05203
Viral carcinogenesis
prob05222
Small cell lung cancer
prob05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127222603 (Traf2)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127222603 (Traf2)
04064 NF-kappa B signaling pathway
127222603 (Traf2)
04668 TNF signaling pathway
127222603 (Traf2)
04071 Sphingolipid signaling pathway
127222603 (Traf2)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
127222603 (Traf2)
09143 Cell growth and death
04210 Apoptosis
127222603 (Traf2)
04217 Necroptosis
127222603 (Traf2)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
127222603 (Traf2)
04622 RIG-I-like receptor signaling pathway
127222603 (Traf2)
04657 IL-17 signaling pathway
127222603 (Traf2)
09152 Endocrine system
04920 Adipocytokine signaling pathway
127222603 (Traf2)
09158 Development and regeneration
04380 Osteoclast differentiation
127222603 (Traf2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
127222603 (Traf2)
05203 Viral carcinogenesis
127222603 (Traf2)
09162 Cancer: specific types
05222 Small cell lung cancer
127222603 (Traf2)
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
127222603 (Traf2)
05160 Hepatitis C
127222603 (Traf2)
05168 Herpes simplex virus 1 infection
127222603 (Traf2)
05163 Human cytomegalovirus infection
127222603 (Traf2)
05167 Kaposi sarcoma-associated herpesvirus infection
127222603 (Traf2)
05169 Epstein-Barr virus infection
127222603 (Traf2)
09171 Infectious disease: bacterial
05132 Salmonella infection
127222603 (Traf2)
05135 Yersinia infection
127222603 (Traf2)
09164 Neurodegenerative disease
05010 Alzheimer disease
127222603 (Traf2)
05014 Amyotrophic lateral sclerosis
127222603 (Traf2)
05016 Huntington disease
127222603 (Traf2)
05017 Spinocerebellar ataxia
127222603 (Traf2)
05022 Pathways of neurodegeneration - multiple diseases
127222603 (Traf2)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
127222603 (Traf2)
09167 Endocrine and metabolic disease
04932 Non-alcoholic fatty liver disease
127222603 (Traf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prob03019
]
127222603 (Traf2)
04121 Ubiquitin system [BR:
prob04121
]
127222603 (Traf2)
Enzymes [BR:
prob01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127222603 (Traf2)
Messenger RNA biogenesis [BR:
prob03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
127222603 (Traf2)
Ubiquitin system [BR:
prob04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
127222603 (Traf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
zf-C3HC4
TRAF3_RING
zf-RING_6
zf-C3HC4_2
zf-ACC
Dynamitin
Sina_ZnF
MATH
Syntaxin-6_N
Motif
Other DBs
NCBI-GeneID:
127222603
NCBI-ProteinID:
XP_051040801
LinkDB
All DBs
Position
Unknown
AA seq
566 aa
AA seq
DB search
MVHSPDLGPGSLLWGPRSPPVPCWLEGGCSCRNTWSPWTLFQPTSPTHFDLWSQIRALWC
VGVITHMAAASVTPPGSLDLLQPGFSKTLLGTKLEAKYLCSACRNILRRPFQAQCGHRYC
SFCLTSILSSGPQNCAACVHEGLYEEGISILESSSAFPDNAARREVESLPAVCPNDGCTW
KGTLKEYESCHEGLCPFLLTECPACKGLVRLSEKEHHTEQECPKRSLSCQHCKAPCSHAD
LEVHYEVCPKFPLTCYGCGKKKISREKFQDHVRSCNKCRIPCRFHSIGCSEMVENEELEG
HEVQRLREHLALLLSSFLESTASQGSQNQAKELLQQCHTLEQKTATFENIVCVLNREVER
VAVTAEACSRQHRLDQDKIEALSNKVQQLERSIGLKDLAMADLEQKVSELEASTYDGVFI
WKISDFARKRQEAVAGRTPAIFSPAFYTSRYGYKMCLRVYLNGDGTGRGTHLSLFFVVMK
GPNDALLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPLSDMNIASGCPLFCPV
SKMEAKNSYVRDDAIFIKAIVDLTGL
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggtccattccccggatctcggtccggggtccctgctgtggggcccacgatccccacct
gtgccttgctggctggagggtggctgctcttgtaggaacacctggtctccctggacactt
ttccagcccacctcccccacccacttcgacctgtggagtcaaattagggctttgtggtgt
gtgggggttataactcacatggctgcagccagtgtgactccccctggctccctagacctg
ctgcagcctggcttctccaagaccctcctggggaccaagttagaagccaagtacctgtgt
tcagcttgcagaaacatcctacggaggcccttccaggcccagtgtggtcaccgctactgc
tccttctgcctgaccagcatcctcagctctgggcctcagaattgtgctgcctgtgtccat
gaaggcctgtatgaagaaggcatttctattttagagagtagttcggccttcccagataat
gctgcccgcagggaggtggagagcctgccagctgtctgtcccaacgatggatgcacctgg
aagggaaccttgaaagagtacgagagctgccatgaaggactatgcccattcctgctcact
gagtgtcctgcatgtaaaggcctggtccgcctcagcgagaaggagcaccacactgagcag
gaatgccctaaaaggagcctgagctgccagcactgcaaggcaccctgtagccatgcggac
ctggaggtacactacgaggtctgccctaagtttcccttaacttgttatggctgtggcaag
aagaagatctctcgggagaagtttcaggaccatgttagatcatgcaacaagtgccggatt
ccatgcagattccactccatcggctgttctgagatggtggagaacgaggaacttgaaggt
catgaagtgcagagactacgggagcacctggccctgctgctgagctcattcctggagtcc
acggcctcccagggaagccagaaccaggccaaggagctgctgcagcagtgccacactttg
gagcagaagacagccaccttcgagaacattgtctgcgtcctgaatcgggaagtagagagg
gtggcagtgactgcagaggcgtgtagtcggcagcaccggctagaccaggacaagattgag
gccctgagtaacaaggtgcagcaactagagaggagcattggcctcaaggacctggccatg
gctgacctggagcagaaggtctcagagttggaggcatccacctatgatggagtcttcatc
tggaagatctcagacttcgccagaaagcgccaagaagctgtagctggccgtacacccgct
atcttctccccagccttctacacaagcagatatggctacaagatgtgtctacgagtctac
ttgaatggcgacggcaccgggcggggaactcatctgtctctcttcttcgtggtgatgaaa
ggccccaatgatgccctcttgcggtggccttttaatcagaaggtaacattgatgttgctg
gaccagaacaaccgggagcatgtaatcgacgcattcaggcctgatgtgacctcatcctcc
ttccagaggcctctcagtgacatgaatatcgccagtggctgccccctcttctgccctgtg
tccaagatggaggccaagaattcctatgtgcgggacgatgctattttcatcaaagctatt
gtggaccttacaggactctag
DBGET
integrated database retrieval system
