Phodopus roborovskii (desert hamster): 127223409
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Entry
127223409 CDS
T08852
Symbol
Dhx9
Name
(RefSeq) ATP-dependent RNA helicase A isoform X1
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
prob03041
]
127223409 (Dhx9)
03012 Translation factors [BR:
prob03012
]
127223409 (Dhx9)
Enzymes [BR:
prob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
127223409 (Dhx9)
5.6.2.6 RNA 3'-5' helicase
127223409 (Dhx9)
Spliceosome [BR:
prob03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
127223409 (Dhx9)
Translation factors [BR:
prob03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
127223409 (Dhx9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
Dicer_dimer
nSTAND3
AAA_19
ResIII
AAA_22
AAA_14
ATPase
Motif
Other DBs
NCBI-GeneID:
127223409
NCBI-ProteinID:
XP_051041927
LinkDB
All DBs
Position
Unknown
AA seq
1387 aa
AA seq
DB search
MGDIKNFLYAWCGKRKMTPAYEIRAVGNKNRQKFMCEVRVEGFNYAGMGNSTNKKDAQSN
AARDFVNYLVRINEVKSEEVPAVGIVPPPPILTDPSDSTANTGEGAPAPMGGPLPPHLAL
KAAENNSGVESSSGYGSPGPTWDRGANLKDYYSRKEEQEVQATLESEEVDLNAGLHGNWT
LENAKARLNQYFQKEKIQGEYKYTQVGPDHNRSFIAEMTIYIKQLGRRIFAREHGSNKKL
AAQSCALSLVRQLYHLGVIEAYSGLTKKKEGERVEPYKVFLSPDLEHQLQNVVQELDLEI
VPPPVDPSMPVILNIGKLAHFEPSQRQNAVGVVPWSPPQSNWNPWTSSNIDEGPLAYAST
EQISMDLKNELTYQLEQDHNLQSVLQEREMLPVKKFEPEILEAISQNSVVIIRGATGCGK
TTQVPQYILDDFIQNDRAAECNIVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFES
ILPRPHASIMFCTVGVLLRKLEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVLAYPEV
RIVLMSATIDTTMFCEYFFNCPIIEVYGRTFPVQEYFLEDCIQMTQFIPPPKDKKKKDKE
DDGGEDDDANCNLICADEYGPETKLSMSQLNEKETPFELIEALLKYIETLNVPGAVLVFL
PGWNLIYTMQKHLENNSHFGSHRYQILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAE
TSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLC
SRARFDRLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLR
ELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAVCTISAATCFPEPFISEG
KRLGYIHRNFAGNRFSDHVALLSVFQAWDDARMSGEEAEIRFCEQKRLNMATLRMTWEAK
VQLKEILINSGFPEDCLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTEG
RNALIHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLFASKKVQS
DGQIIFIDDWIRLQISHEAAACITALRAAMEALVVEVSKQPNIISQLDPVNEHMLNTIRQ
ISRPSAAGINLMIGSVRYGDGPRPPKMARYDNGSGYRRGYGGGGYGGGGGYGGGYGSGGF
GGGFGSGGGGFGGGFNSGGGGFGGGGGGFGSGGGGFGGGGGGFSGGGGGFGGGRGGNFGG
SGGFGSGGGGYGGGGGGYGGGGSGGGYGGGSGGYGGGGGGYGGGEGYNISPNSYRGNYGG
GGGGYRGGSQGGYRNNFGGDYRGSSGDYRGSGGGYRGSGGFQRRGGYGGGYFGQGRGGGG
GGGGGGY
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatattaaaaattttctgtatgcctggtgtggcaaaaggaagatgaccccagcc
tatgaaattagagcagtaggaaacaaaaacagacagaaattcatgtgtgaggttcgagta
gaagggtttaattatgctggaatgggcaattccaccaataaaaaagatgcacagagcaat
gcagccagagacttcgttaactatttagttcgaataaatgaagtaaagagtgaagaagtt
ccagctgtaggaattgtaccacctccacctatacttactgacccatctgatagcacagca
aatactggagaaggtgccccagcacccatgggaggaccacttcctccacatctggctctc
aaagcagcagaaaacaattctggagttgagtcctcatctggctatggttctcctgggccc
acctgggaccgaggagccaatttaaaggattactattcaagaaaggaagagcaagaagtg
caagcgactctagagtcagaagaagtggatttaaatgccgggcttcacggaaactggaca
ttggaaaatgctaaggctcgtctgaaccagtatttccaaaaagaaaagatccaaggagaa
tataagtacacccaagtgggtcccgaccacaacaggagctttattgcagaaatgaccatt
tatatcaagcagctgggcagaaggattttcgcacgtgaacatggatcaaacaagaaatta
gctgcacagtcatgtgccctctcacttgtccgacaactgtatcatcttggagtgattgag
gcttactctgggcttacaaagaagaaagaaggagagagagtggagccttacaaagttttc
ctgtctccagatttggagcatcagctgcaaaatgtggttcaagagctagatcttgaaatt
gtgcccccacctgttgatccttccatgccagttatactcaacattgggaaattggctcat
tttgaaccatctcagaggcaaaacgcagtgggagtggtaccttggtcacccccacagtcc
aactggaatccttggactagtagcaatattgatgaggggcccctggcttatgcttctaca
gaacaaatcagcatggaccttaagaatgaattaacataccagctcgaacaggatcataat
ttacaaagtgtgttacaagagagagagatgcttcctgtgaagaaatttgaacctgaaatt
ctggaagccattagccaaaattcggttgtgataatccgtggggctactggatgtggtaaa
accacacaggttccacagtacattttggatgactttatccagaatgacagagcagcagag
tgtaatattgttgtgactcagcccagaaggatcagtgcagttgcagtggctgaacgagtt
gcttatgagagaggtgaagagcctggaaaaagctgtggttacagtgtccggtttgagtct
atacttccacgccctcatgccagtataatgttttgtactgtaggtgtgctcctaagaaaa
ttagaagcgggcattcgagggatcagtcatgtaattgtagatgaaatccatgaaagagat
attaatactgacttcctcttggtagtactgcgtgatgtggttctagcttatcctgaagtc
cgaattgtccttatgtctgcaactattgataccaccatgttctgtgaatatttctttaat
tgccccatcattgaagtttatggaaggactttcccagttcaagaatattttctggaagac
tgcattcagatgactcaattcattcctcctccaaaggacaagaagaagaaggataaagaa
gatgatggtggtgaagatgatgatgcaaattgcaatctaatatgtgctgacgaatatggg
cctgaaacaaagttgagcatgtctcagttgaatgaaaaggaaacaccttttgaactcatt
gaagctcttcttaaatacatcgaaaccctaaacgttcctggagctgtcttggtctttttg
cctggctggaatttgatttatactatgcaaaaacatttggaaaataattcccattttgga
agtcaccggtatcagattctacctctgcattctcagattcctcgggaggaacagcgcaaa
gtgtttgatccagtaccagatggagtaacaaaggttattttgtccacaaatattgctgaa
acaagcatcaccataaatgatgttgtttatgttattgactcctgcaaacaaaaagtgaaa
ctatttacagctcacaacaatatgaccaactatgctactgtatgggcatcaaaaacaaac
cttgaacagaggaaagggcgagccggccgtgtacgacctgggttctgctttcatctttgt
agtcgagctcgttttgacagactggaaacccacatgacaccagagatgtttagaacacca
ttacatgaaattgctttgagcataaaacttctgcgcctggggggaattggccaattcctt
gcaaaggcaattgaacctccacctttggatgctgtaattgaagcagagcatactcttaga
gaacttgatgctttagatgccaatgatgagttgactcctctgggacgtatcctggctaaa
ctccccatcgagcctcgttttggaaaaatgatgataatggggtgtattttctatgtggga
gatgctgtctgtaccatctctgctgctacctgctttccagagcccttcatcagtgaagga
aaacgtctgggctacattcaccggaattttgctgggaacagattttctgatcatgttgct
cttttatcagtattccaagcctgggatgatgctaggatgagtggggaagaagcagaaata
cgtttttgtgagcaaaagcgactcaatatggctacactaagaatgacttgggaggccaaa
gtacagcttaaagagattctgattaactctggctttccagaagattgtttattgacacaa
gtgtttactaacactggaccagataataatttggatgttgttatctctctgctggccttt
ggtgtgtaccctaatgtatgttatcataaagaaaagagaaagattcttaccactgaaggg
cgtaatgcacttatccacaaatcatctgtaaactgcccttttagcagccaagacatgaag
tacccatctcccttctttgtttttggtgaaaagattagaacccgagcaatctctgctaaa
ggcatgaccttagtcaccccattacaattacttttgtttgcgtccaagaaagtccagtct
gatgggcagatcatttttatagatgactggatcagactgcaaatatcacatgaagctgca
gcatgcatcacagccctccgggcagccatggaagctctggttgttgaagtgtccaaacaa
ccaaatatcatcagtcagttggaccctgtaaatgaacatatgctgaacacaatccgtcaa
atttctaggccctcagctgctggtatcaaccttatgattggaagtgtacggtatggcgat
ggtccacgacctcccaagatggcccgctacgataatggaagtggatatagaagaggatat
ggtggaggaggatatggcgggggaggcggatatggtggtggctatggtagtggaggcttc
ggaggaggctttggaagtggtgggggaggtttcggaggtggcttcaacagtggcggtgga
ggcttcggtggtggtgggggaggctttggtagtgggggaggcggctttggtggtgggggg
ggaggctttagtgggggaggaggtggctttggtggtggcagaggtggcaactttgggggt
agtggaggctttggaagtggtgggggaggctacggaggtggaggcggtggctatggaggt
ggtggtagtggtggtgggtatggaggaggcagtggaggctatggaggtgggggaggaggc
tatggaggtggagaaggttataatattagccccaactcttatcgtggaaattatggtgga
ggtggtggcggatatagaggaggttcgcaagggggctacagaaacaactttggtggagac
tacagaggatctagtggagactaccgtggatctggagggggctacagaggatctggaggt
ttccagcgaaggggtggctatggaggtggatattttggacaaggaagaggaggagggggt
ggtggtgggggtggtggatattaa
DBGET
integrated database retrieval system
