KEGG   Phodopus roborovskii (desert hamster): 127224283
Entry
127224283         CDS       T08852                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DO beta chain
  KO
K06752  MHC class II antigen
Organism
prob  Phodopus roborovskii (desert hamster)
Pathway
prob04145  Phagosome
prob04514  Cell adhesion molecules
prob04612  Antigen processing and presentation
prob04640  Hematopoietic cell lineage
prob04658  Th1 and Th2 cell differentiation
prob04659  Th17 cell differentiation
prob04672  Intestinal immune network for IgA production
prob04940  Type I diabetes mellitus
prob05140  Leishmaniasis
prob05145  Toxoplasmosis
prob05150  Staphylococcus aureus infection
prob05152  Tuberculosis
prob05164  Influenza A
prob05166  Human T-cell leukemia virus 1 infection
prob05168  Herpes simplex virus 1 infection
prob05169  Epstein-Barr virus infection
prob05310  Asthma
prob05320  Autoimmune thyroid disease
prob05321  Inflammatory bowel disease
prob05322  Systemic lupus erythematosus
prob05323  Rheumatoid arthritis
prob05330  Allograft rejection
prob05332  Graft-versus-host disease
prob05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:prob00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    127224283
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    127224283
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    127224283
   04612 Antigen processing and presentation
    127224283
   04658 Th1 and Th2 cell differentiation
    127224283
   04659 Th17 cell differentiation
    127224283
   04672 Intestinal immune network for IgA production
    127224283
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    127224283
   05164 Influenza A
    127224283
   05168 Herpes simplex virus 1 infection
    127224283
   05169 Epstein-Barr virus infection
    127224283
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    127224283
   05152 Tuberculosis
    127224283
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    127224283
   05140 Leishmaniasis
    127224283
  09163 Immune disease
   05310 Asthma
    127224283
   05322 Systemic lupus erythematosus
    127224283
   05323 Rheumatoid arthritis
    127224283
   05320 Autoimmune thyroid disease
    127224283
   05321 Inflammatory bowel disease
    127224283
   05330 Allograft rejection
    127224283
   05332 Graft-versus-host disease
    127224283
  09166 Cardiovascular disease
   05416 Viral myocarditis
    127224283
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    127224283
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:prob04147]
    127224283
Exosome [BR:prob04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   127224283
  Exosomal proteins of epithelial cells
   127224283
  Exosomal proteins of breast milk
   127224283
SSDB
Motif
Pfam: MHC_II_beta C1-set Ig_3 MHC_I DUF1538 C2-set_3
Other DBs
NCBI-GeneID: 127224283
NCBI-ProteinID: XP_051043209
LinkDB
Position
Unknown
AA seq 271 aa
MGAGRAPWVVALLVNLMRPDSFMSEGRDSPEDFVIQAKADCYFTNGTEKVRFVVRFIFNL
EEYLHFDSDLGVFVALTELGEPDAEQWNRRWDLLEQSRASVNMVCRQNYKLGAPFTVERE
VPPEVTVFPERTPLLQQHNLLLCSVTGFYPGDIKVRWFRNGQEERSGIMSTGLVRNGDWT
FQMTVMLEMIPQFGDIYSCLVEHPSLQSPVSVEWMAQPEYPWKKILIGGAALLLGLIVFL
VGVVIYFKARKASVETQSDHEVSRAYPPHSQ
NT seq 816 nt   +upstreamnt  +downstreamnt
atgggtgctgggagggccccctgggtggtggctctcctagtgaacctcatgaggccagat
tccttcatgtctgaaggcagagactccccagaggattttgtgatccaggcaaaggcggac
tgttacttcaccaacgggacagaaaaggtgcgcttcgtggtcaggttcatcttcaacctg
gaggagtacttacattttgacagtgacttgggggtgtttgtggcgctgacggagctaggg
gagcctgatgctgagcagtggaacagacgttgggacctcctggagcagagccgagcctct
gtgaacatggtctgtaggcagaactacaagctgggggcccccttcaccgtggagagagag
gtaccaccggaggtgacagtgttcccagagaggactccgctgctgcagcaacacaacctg
ctgctctgctctgtgacaggcttctaccccggggacataaaagttaggtggtttcggaat
ggacaggaggagaggtctggcatcatgtccactggacttgttaggaatggagactggacc
ttccagatgacagtaatgctggaaatgataccacagtttggagacatctacagctgcctc
gtggaacaccccagcctccagagccctgtttctgtggagtggatggctcagcctgaatat
ccatggaaaaagatactgattggaggtgcagcactcctgcttgggctaattgtcttcctg
gtgggtgttgttatctacttcaaggctcggaaagcatctgtggagacccagtcagaccat
gaggtctcaagagcttatccacctcattcccagtaa

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