Phodopus roborovskii (desert hamster): 127224486
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Entry
127224486 CDS
T08852
Symbol
C9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04140
Autophagy - animal
prob05014
Amyotrophic lateral sclerosis
prob05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127224486 (C9orf72)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
127224486 (C9orf72)
05022 Pathways of neurodegeneration - multiple diseases
127224486 (C9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
prob04131
]
127224486 (C9orf72)
Membrane trafficking [BR:
prob04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
127224486 (C9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
127224486
NCBI-ProteinID:
XP_051043477
UniProt:
A0AAU9ZC61
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MSTICPPPSPAVAKTEIALSGESPLLAATFAYWDNILGPRVRHIWAPKTEQVLLSDGEIT
FLANHTLNGEILRNAESGAIDVKFFVLSEKGVIIVSLIFDGNWNGDRSTYGLSIILPQTE
LSFYLPLHRVCVDRLTHIIRKGRIWMHKERQENVQKIVLEGTERMEDQGQSIIPMLTGEV
IPVMELLASMKSHSVPEEIDIADTVLNDDDIGDSCHEGFLLNAISSHLQTCGCSVVVGSS
AEKVNKIVRTLCLFLTPAERKCSRLCEAESSFKYESGLFVQGLLKDATGSFVLPFRQVMY
APYPTTHIDVDVNTVKQMPPCHEHIYNQRRYMRSELTAFWRATSEEDMAQDTIIYTDESF
TPDLNIFQDVLHRDTLVKAFLDQVFHLKPGLSLRSTFLAQFLLVLHRKALTLIKYIEDDT
QKGKKPFKSLRNLKTDLDLTAEGDLNIIMALAEKIKPGLHSFIFGRPFYTSVQERDVLMT
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtctactatctgcccaccaccatctcctgctgttgccaagacagagattgctttaagt
ggtgaatcaccattgttggcagctacctttgcttactgggataatattctcggtcctaga
gtaaggcacatttgggctccaaagacagaacaggtacttcttagtgatggagaaataact
tttcttgccaaccacactctaaatggagaaattcttcgaaatgcagagagtggagctata
gatgtaaagttttttgtcttatctgaaaaaggagtgattattgtttcattaatctttgac
ggaaactggaatggagaccggagcacttacggactatcaattatacttcctcagacagaa
cttagtttctacctcccacttcacagagtgtgtgttgacagattaacacacattattcgg
aaaggaaggatatggatgcataaggaaagacaagaaaatgtccagaaaattgttttggaa
ggcacggagagaatggaagatcagggtcagagtatcattcccatgcttactggggaagtc
attcctgtgatggagctgcttgcatctatgaagtcacacagtgttcctgaagaaatagat
atagctgatacagtcctcaatgatgatgacattggtgacagctgtcacgaaggctttctt
ctcaatgccatcagctcacatctgcagacctgtggctgctctgtggtagtaggcagcagt
gcagagaaagtgaacaagatagtgagaacgttatgcctttttctgactccagcagagagg
aaatgctccaggctgtgtgaagcagaatcctcctttaaatatgaatcgggactctttgta
caaggcctgctaaaggatgcaacaggaagctttgtactacccttccggcaagttatgtat
gccccttatccaaccacgcacatcgatgtggatgtcaatactgttaagcaaatgccaccg
tgtcacgaacacatttataatcaacgcagatacatgagatcagaactgacagccttctgg
agggcaacgtcagaagaggacatggctcaggacaccatcatctacacagatgaaagcttc
acccctgatttgaatatattccaagatgtcttacacagagatactctagtgaaagccttc
ctggatcaggtcttccatttgaaacctggcctgtctctcaggagtactttccttgcacag
ttcctacttgttcttcacagaaaggccttgacactaatcaaatacatagaggacgatacg
cagaaggggaaaaagccctttaagtctcttcggaacctgaagacagatcttgacttaaca
gcagagggcgatcttaacataataatggctctagctgagaaaattaagccaggccttcac
tctttcatctttgggagacctttctacactagcgtacaagaacgtgatgttctaatgact
ttttaa
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integrated database retrieval system
