Phodopus roborovskii (desert hamster): 127225795
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Entry
127225795 CDS
T08852
Symbol
Apobec3b
Name
(RefSeq) DNA dC->dU-editing enzyme APOBEC-3B
KO
K18750
C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03250
Viral life cycle - HIV-1
prob05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
127225795 (Apobec3b)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
127225795 (Apobec3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prob03019
]
127225795 (Apobec3b)
Messenger RNA biogenesis [BR:
prob03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
127225795 (Apobec3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NAD2
APOBEC2
NAD1
APOBEC_N
SNAD4
APOBEC3
APOBEC_C
APOBEC4_like
APOBEC4
APOBEC1
dCMP_cyt_deam_1
MafB19-deam
Toxin-deaminase
Bd3614-deam
Motif
Other DBs
NCBI-GeneID:
127225795
NCBI-ProteinID:
XP_051045342
LinkDB
All DBs
Position
Unknown
AA seq
412 aa
AA seq
DB search
MQPQTEGPRTGMDSACMGCCHRKPYSPIRNPIKMLYQRTFYFHFKNLHYANGRNNTFLCY
EVNRVQCDELVPLCQGVFRKESSHLHAEVCFLSWFHTQVLEVLPPGERYSITWYVSWSPC
NKCAEKVAWFLDTHSNLSLAIFSSRLYYFWKPDYQDKLRRLNQAGAHMAAMDFPEFKKCW
DKFVDNDGKSFRPWKRLKINFRSQDSRLRKILRSPVSLLREDIFYLQYNNRHRVEPVQHR
YYQRKTYLCYQLEQHNDQQPLKGCLQNKKGKHAEILFIDEMRSLELGQMRITCYLTWSPC
PNCAQELAAFKMDHPDLVLHIYTSRLYFHWRRQYQEGLCSLWRSGIQVDIMDLPQFTDCW
INFVNSQSPFWPWNNLEKNSWCIQRRLQRIKSRGLQDLTNDLGNLQLGPPLS
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccccagaccgaggggccgagaactggaatggattcagcctgcatgggatgctgc
catcgcaaaccctattcaccgatcagaaacccgataaagatgttatatcaaagaacattc
tacttccactttaagaatctccactatgccaatggtcgaaataataccttcttgtgctac
gaagtgaacagagtacaatgtgatgagcttgtccccctttgccaaggggtctttagaaaa
gagagcagtcacctccatgctgaagtgtgcttcctctcctggttccacacccaagtactg
gaagtgttgccccctggtgaaaggtacagcatcacctggtatgtgtcctggagcccctgc
aataagtgtgcagagaaagtggcctggttcctggacacacatagcaacctgagcctggcc
atcttcagctcccgcctctactatttttggaagccagactaccaggacaagcttcgcagg
ttgaatcaggcaggagcccacatggctgccatggacttcccagaatttaaaaagtgttgg
gacaaatttgtggacaatgatggcaagtcattcaggccttggaagagacttaaaataaat
tttaggtcccaggattccaggcttcggaagattctcagaagcccagtgagtctgctgaga
gaagacatattctatttgcagtataacaatagacaccgggttgagccagtccagcatcgc
tattaccaaaggaagacctatctatgctaccagctggagcagcacaatgaccaacagcca
ctcaaaggctgcctgcaaaacaagaaaggtaaacacgcagaaatcctcttcattgatgag
atgcgttccttggaactcggccaaatgcgaatcacgtgctacctcacatggagcccctgc
ccgaactgtgcccaggaactggctgcattcaaaatggatcacccagacctggttctacac
atctacacctcccgtctgtacttccactggaggaggcagtaccaggagggcctgtgttct
ctctggcgatcggggatccaggtggacatcatggacctcccgcaatttactgactgctgg
ataaactttgtgaactcccaaagtccgttctggccgtggaataatctggagaaaaacagc
tggtgcatacaaagacggctccagaggatcaagtcccggggtctgcaagatttgacgaat
gaccttggaaatttacaacttggacccccattgtcctga
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