KEGG   Phodopus roborovskii (desert hamster): 127225828
Entry
127225828         CDS       T08852                                 
Symbol
Rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
prob  Phodopus roborovskii (desert hamster)
Pathway
prob03420  Nucleotide excision repair
prob04066  HIF-1 signaling pathway
prob04110  Cell cycle
prob04114  Oocyte meiosis
prob04120  Ubiquitin mediated proteolysis
prob04141  Protein processing in endoplasmic reticulum
prob04310  Wnt signaling pathway
prob04350  TGF-beta signaling pathway
prob04710  Circadian rhythm
prob05170  Human immunodeficiency virus 1 infection
prob05200  Pathways in cancer
prob05211  Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:prob00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    127225828 (Rbx1)
   04120 Ubiquitin mediated proteolysis
    127225828 (Rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    127225828 (Rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    127225828 (Rbx1)
   04350 TGF-beta signaling pathway
    127225828 (Rbx1)
   04066 HIF-1 signaling pathway
    127225828 (Rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    127225828 (Rbx1)
   04114 Oocyte meiosis
    127225828 (Rbx1)
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    127225828 (Rbx1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    127225828 (Rbx1)
  09162 Cancer: specific types
   05211 Renal cell carcinoma
    127225828 (Rbx1)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    127225828 (Rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:prob04121]
    127225828 (Rbx1)
   03400 DNA repair and recombination proteins [BR:prob03400]
    127225828 (Rbx1)
Enzymes [BR:prob01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     127225828 (Rbx1)
Ubiquitin system [BR:prob04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   127225828 (Rbx1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     127225828 (Rbx1)
   Cul2 complex
     127225828 (Rbx1)
   Cul3 complex
     127225828 (Rbx1)
   Cul4 complex
     127225828 (Rbx1)
   Cul7 complex
     127225828 (Rbx1)
   Cul8 complex
     127225828 (Rbx1)
   Cul9 complex
     127225828 (Rbx1)
DNA repair and recombination proteins [BR:prob03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      127225828 (Rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      127225828 (Rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003 PHD_NSD
Other DBs
NCBI-GeneID: 127225828
NCBI-ProteinID: XP_051045397
UniProt: A0AAU9ZF28
LinkDB
Position
Unknown
AA seq 108 aa
MAAAMDVDTPSGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggcagcgatggatgtggatacccccagcggcaccaacagcggcgcgggcaagaag
cgctttgaagtgaaaaagtggaatgcagtagccctctgggcctgggatattgtggttgat
aactgtgccatctgcaggaaccacattatggatctttgcattgaatgtcaggccaaccag
gcgtctgctacttccgaagaatgtactgttgcatggggagtctgtaatcatgcttttcat
ttccactgcatctctcgatggctcaaaaccaggcaggtgtgtcccttggacaacagagag
tgggaattccaaaagtatgggcactag

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