Phodopus roborovskii (desert hamster): 127229262
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Entry
127229262 CDS
T08852
Symbol
Iars1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
127229262 (Iars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
prob01007
]
127229262 (Iars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
prob03016
]
127229262 (Iars1)
Enzymes [BR:
prob01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
127229262 (Iars1)
Amino acid related enzymes [BR:
prob01007
]
Aminoacyl-tRNA synthetase
Class I (U)
127229262 (Iars1)
Transfer RNA biogenesis [BR:
prob03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
127229262 (Iars1)
Prokaryotic type
Other AARSs
127229262 (Iars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Plectin_PPL
Motif
Other DBs
NCBI-GeneID:
127229262
NCBI-ProteinID:
XP_051050273
LinkDB
All DBs
Position
Unknown
AA seq
1274 aa
AA seq
DB search
MVQQVPENISFPTEEEKILQFWCKYNCFQECLKQSKNRPKFTFYDGPPFATGLPHYGHIL
AGTIKDIVTRYAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIAEYNKQC
RAIVMRYSTEWKSTITRLGRWIDFDNDYKTLYPQFMESVWWVFKQLYDKGLVYRGVKVMP
FSTACGTPLSNFESNQNYKDVQDPSVFVTFPLEEDENTSLVAWTTTPWTLPSNLALCVNP
EMQYVKIKDVARGKLFILMEPRLSALYKLESDYEILERFPGASLKGKKYKPLFDYFIKAS
SELCATFPLQYKENGAFTVLVDHYVKDEEGTGVVHQAPYFGADDHRVCMDFNIIQKDSTP
VCPVDASGCFTEEVTHFVGQYVKDADKNIIRMLKEQGRLLVASTFTHSYPFCWRSDTPLI
YKSVPSWFVRVEHMVEQLLKNNDMCYWVPEFVREKRFGNWLKEARDWAISRNRYWGTPIP
LWVSEDFEEVVCIGSVAELEELSGTKISDLHRESIDHLTIPSCCGKGPLRRISEVFDCWF
ESGSMPYAQVHYPFESKREFEDAFPADFIAEGIDQTRGWFYTLLVLSTALFGQPPFKNVI
VNGLILASDGQKMSKRKKNYPDPVSIINKYGADALRLYLINSPVVRAENLRFKEEGVRDV
LKDVLLPWYNAYRFFIQNVFRLHKEDGVEFLYNEHTVRESPNITDRWILSFMQSLIGFFE
TEMTAYRLYTVVPRLVKFVDILTNWYVRMNRRRLKGESGTEDCVMALETLFSVLLSLCRL
MAPYTPFLTELMYQNLKTLIDPVSVQDKDTLSIHYLMLPHVREELIDKKTENAVSRMQSV
IELGRVIRDRKTIPIKYPLKEIVVIHQDPEALEDIKSLEKYIIEELNVRKVTLSTDKNKY
GIRLRAEPDHMVLGKRLKGAFKAVMMAIKQLSSEELEQFQKSGSIVVEGHELHEEDIRLM
YTFDQATGGTTQFEAHSDAQALVLLDVTPDQSMVDEGMAREVINRIQKLRKKCNLVPTDE
ITVYYKAKSEGRYLNNVIESHTDFIFATIKAPLKAYPVPTSDNILIQEQTQLKGSELELT
LTKGSCVPGPACAYVNLNICVNGTEQGGVLLLENPKGDNKLNLVKLKSVVTSIFGVKNAE
LSVFHGETEIQNQADLLSLSGRTLCVTAGAAPCAGNSPSTLVCQFINLKLLNAEPQECLT
GTVGTLLLENPLGQNGLSHQGLAYEAAKVFGLRSRRLKLFLDETQTQEITEDIPMKTLNM
KTVYVSVLPTTADG
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggttcaacaagttccagaaaacatcagttttcctactgaagaagagaaaatcttgcag
ttctggtgcaaatataactgcttccaggaatgcttaaagcagtcaaaaaacaggccaaaa
tttaccttctatgatgggcctccctttgcaaccggactgcctcactatggacatatactt
gcagggacaattaaagacatagttacgagatatgctcaccagagtgggtttcacgttgac
agacgatttggatgggattgtcatggcttacctgtggaatatgaaattgataagacactg
gggatcaaagggccagaggatgtggccaaaatggggattgctgagtataacaaacagtgc
cgagcaattgtgatgagatactctactgagtggaagtctaccattacgagactcggccgc
tggattgactttgacaatgactacaaaacactgtacccacaattcatggaatcagtctgg
tgggtcttcaagcagctgtatgataaaggccttgtgtacagaggcgtgaaagtcatgccc
ttctccaccgcttgcggcactccactttctaactttgaatcaaaccagaattacaaggat
gttcaggatccttcagtatttgtaacgttccctttggaggaagatgaaaacacatcctta
gttgcttggacaaccactccttggactctacctagtaaccttgccctgtgtgtcaatcca
gaaatgcagtatgtgaagatcaaggatgttgccagggggaagttgttcattttaatggaa
cccagattatcggccctctataagctagagagtgactatgagatcctcgagaggtttcct
ggagcctctcttaaaggaaagaaatacaagccgttgtttgactactttattaaggcaagt
tcggagctctgtgcaacctttcctttgcagtataaagagaacggggccttcactgtgctt
gttgaccactacgtgaaggatgaagaaggcacgggagtcgtgcaccaggccccttacttt
ggtgctgatgaccatcgggtctgcatggacttcaacattattcagaaggactccacccct
gtttgccctgtggatgcttcaggctgcttcacagaagaagtgacacattttgtgggacag
tatgtgaaggatgctgacaaaaatatcattaggatgttgaaggaacagggccgactcctt
gtagccagcaccttcactcacagctaccctttctgctggaggtcagacactcccctcatt
tacaagtcagtgcccagctggtttgtgcgagtggagcacatggtggagcagctgctgaag
aacaatgacatgtgttactgggtcccagagtttgtacgagaaaagcggtttggaaattgg
ctgaaggaggcacgtgactgggcaatttccagaaacagatactggggtacccccatccca
ctgtgggtcagtgaagacttcgaggaggtagtttgcattggatcagtggcagagcttgaa
gaattgtcgggaacaaaaatctcagatctccacagagagagcattgaccacctgacaatc
ccatcctgctgcgggaaaggaccgttgcggcgcatctctgaagtgttcgactgttggttc
gagagtggaagtatgccctatgcccaggttcattacccatttgagagcaagcgagaattt
gaggacgcttttcctgcagacttcattgctgaaggcattgatcaaaccagaggatggttt
tacaccctgctagtgctgtccacagccctctttggacaaccacctttcaagaacgtgatt
gtgaatggactcatcttggcaagtgatggccaaaaaatgagcaaacggaaaaagaactac
ccagatccagtttccatcatcaacaagtatggcgccgatgccctcaggttgtacctgatc
aattcccctgtagtgagagcagaaaacctccgctttaaggaggaaggagtgcgggatgtc
ctcaaagatgtgctgctcccgtggtacaatgcctaccgattcttcatccagaacgtcttc
aggcttcacaaggaagatggagtggagttcctgtacaatgagcacacggtcagagagagc
cctaacatcaccgaccggtggattctgtccttcatgcagtccctcattgggttctttgag
acggaaatgacagcttacagactatatactgtggtgcctcgcctggttaagtttgtagat
attctgaccaattggtatgtccgaatgaacaggagaagattaaagggtgagagtgggacg
gaagactgtgttatggctctggagacattgttcagtgtcctgctttctctgtgcagactg
atggctccttacacaccatttcttactgaattgatgtaccagaatctaaagacactcatc
gatcctgtgtctgtccaggacaaggacacgctcagcatccactacctcatgctgccacat
gttcgagaagaattgattgacaagaaaacggagaacgcagtgtctagaatgcagtccgtg
attgaactgggccgagtgatacgagaccggaaaactattccaataaagtatcctttgaag
gaaattgtggttatccaccaagacccagaagctctcgaggatatcaagtccttggagaaa
tatatcattgaggaattaaatgttcgaaaagttacactgtctactgataaaaacaagtat
ggtattcgactaagagctgaaccggatcacatggtccttggcaagcgtctgaagggagcc
tttaaagctgtgatgatggccataaaacagctgagcagcgaggagctggagcaattccag
aaaagcgggagtattgttgtggaaggccatgaattgcacgaagaagatattcgcctcatg
tacacctttgaccaggccacaggagggactacacagtttgaagcgcactctgatgctcag
gctttagttctcttagacgtcacacctgaccagtcaatggtggatgaaggcatggctcgg
gaagtcatcaatcgcatccagaaacttcgaaagaagtgcaatctggttccaacggatgaa
ataacagtttactataaagcaaagtctgaagggagatacttgaataatgtcattgaaagc
cacaccgacttcatatttgccactatcaaagctcccttaaaagcatacccagttcctaca
tcagataacatcctcattcaggaacaaacacagttaaaggggtcggaactggaactcaca
ctcaccaagggatcctgtgtgcctggtcctgcttgtgcttatgtgaaccttaacatctgt
gtgaatggcactgagcaaggtggagtgttgcttttggaaaatccaaaaggtgataacaag
ttgaatcttgtaaagctaaagagtgttgttaccagcatatttggtgttaagaatgcagag
ctgtcagtcttccacggtgaaacagaaatacagaaccaagctgacttgctgagtctgagt
gggcggacactgtgtgtgactgcaggagcagcgccctgtgcaggcaacagccccagcact
cttgtgtgtcagttcatcaacctgaagctcctaaatgcagagccgcaagagtgtctaaca
ggaactgtgggtactctcttgcttgaaaacccacttggacagaatggactcagccaccaa
gggcttgcatatgaggcagccaaggtgtttggacttcggagcaggaggctaaagctgttc
ctggatgagactcaaacacaggaaattacagaagatatcccaatgaagactttgaatatg
aagactgtgtatgtttctgttctgccaacaactgcagatggctaa
DBGET
integrated database retrieval system
